Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
H3BM21 MIR9-1-201ENST00000385198 89 ntBASIC2.76□□□□□ -1.97
H3BM21 SNORA40.6-201ENST00000391153 128 ntBASIC2.76□□□□□ -1.97
H3BM21 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.76□□□□□ -1.97
H3BM21 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.76□□□□□ -1.97
H3BM21 AL109933.3-201ENST00000619095 188 ntBASIC2.76□□□□□ -1.97
H3BM21 MIR6733-201ENST00000635723 61 ntBASIC2.76□□□□□ -1.97
H3BM21 MIR7978-201ENST00000636158 59 ntBASIC2.76□□□□□ -1.97
H3BM21 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
H3BM21 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.75□□□□□ -1.97
H3BM21 AL138827.1-201ENST00000402666 306 ntBASIC2.75□□□□□ -1.97
H3BM21 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.75□□□□□ -1.97
H3BM21 Y_RNA.606-201ENST00000410579 103 ntBASIC2.75□□□□□ -1.97
H3BM21 AC005786.1-201ENST00000588553 154 ntBASIC2.75□□□□□ -1.97
H3BM21 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
H3BM21 AL161431.1-201ENST00000618966 4205 ntBASIC2.74□□□□□ -1.97
H3BM21 RNU6-1079P-201ENST00000362861 110 ntBASIC2.74□□□□□ -1.97
H3BM21 RNY4P3-201ENST00000365254 95 ntBASIC2.74□□□□□ -1.97
H3BM21 RNU6-604P-201ENST00000390917 100 ntBASIC2.74□□□□□ -1.97
H3BM21 AL023284.1-201ENST00000403956 276 ntBASIC2.74□□□□□ -1.97
H3BM21 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.74□□□□□ -1.97
H3BM21 MIR1261-201ENST00000408659 82 ntBASIC2.74□□□□□ -1.97
H3BM21 RNA5SP21-201ENST00000410917 96 ntBASIC2.74□□□□□ -1.97
H3BM21 HMGN2P35-201ENST00000412164 270 ntBASIC2.74□□□□□ -1.97
H3BM21 AC092427.1-202ENST00000430569 476 ntBASIC2.74□□□□□ -1.97
H3BM21 AL691482.2-201ENST00000457453 84 ntBASIC2.74□□□□□ -1.97
H3BM21 RNU7-106P-201ENST00000459514 67 ntBASIC2.74□□□□□ -1.97
H3BM21 RNU7-43P-201ENST00000516554 64 ntBASIC2.74□□□□□ -1.97
H3BM21 MIR5094-201ENST00000578766 85 ntBASIC2.74□□□□□ -1.97
H3BM21 MIR4435-1-201ENST00000582552 80 ntBASIC2.74□□□□□ -1.97
H3BM21 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
H3BM21 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.73□□□□□ -1.97
H3BM21 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
H3BM21 MIR26A1-201ENST00000362205 77 ntBASIC2.73□□□□□ -1.97
H3BM21 RNU6-808P-201ENST00000391233 108 ntBASIC2.73□□□□□ -1.97
H3BM21 AC121758.2-201ENST00000553271 193 ntBASIC2.73□□□□□ -1.97
H3BM21 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.73□□□□□ -1.97
H3BM21 U4.3-201ENST00000621047 82 ntBASIC2.73□□□□□ -1.97
H3BM21 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
H3BM21 RNU6-1187P-201ENST00000364771 110 ntBASIC2.72□□□□□ -1.97
H3BM21 MIR660-201ENST00000385235 97 ntBASIC2.72□□□□□ -1.97
H3BM21 RPS29P6-201ENST00000438196 145 ntBASIC2.72□□□□□ -1.97
H3BM21 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
H3BM21 AC003982.1-202ENST00000469928 248 ntBASIC2.72□□□□□ -1.97
H3BM21 SNORA9.3-201ENST00000516383 129 ntBASIC2.72□□□□□ -1.97
H3BM21 MIR3605-201ENST00000583214 100 ntBASIC2.72□□□□□ -1.97
H3BM21 AL096861.1-201ENST00000610899 123 ntBASIC2.72□□□□□ -1.97
H3BM21 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.72□□□□□ -1.97
H3BM21 AC003685.2-201ENST00000422795 395 ntBASIC2.71□□□□□ -1.98
H3BM21 SCARNA16.3-201ENST00000516595 184 ntBASIC2.71□□□□□ -1.98
H3BM21 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
H3BM21 AL513423.1-201ENST00000621695 132 ntBASIC2.71□□□□□ -1.98
H3BM21 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
H3BM21 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
H3BM21 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
H3BM21 AC104389.3-201ENST00000445629 235 ntBASIC2.7□□□□□ -1.98
H3BM21 AC108938.1-201ENST00000451204 136 ntBASIC2.7□□□□□ -1.98
H3BM21 MIR3140-201ENST00000583685 90 ntBASIC2.7□□□□□ -1.98
H3BM21 AC021506.2-201ENST00000612354 169 ntBASIC2.7□□□□□ -1.98
H3BM21 U6.81-201ENST00000612550 106 ntBASIC2.7□□□□□ -1.98
H3BM21 AL449363.1-201ENST00000617815 186 ntBASIC2.7□□□□□ -1.98
H3BM21 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
H3BM21 Y_RNA.239-201ENST00000364444 113 ntBASIC2.69□□□□□ -1.98
H3BM21 RNU6-936P-201ENST00000384005 107 ntBASIC2.69□□□□□ -1.98
H3BM21 SNORD88.1-201ENST00000408684 91 ntBASIC2.69□□□□□ -1.98
H3BM21 RNA5SP445-201ENST00000515889 115 ntBASIC2.69□□□□□ -1.98
H3BM21 RNU2-19P-201ENST00000517288 84 ntBASIC2.69□□□□□ -1.98
H3BM21 MIR5089-201ENST00000580047 84 ntBASIC2.69□□□□□ -1.98
H3BM21 AC092634.7-201ENST00000621022 103 ntBASIC2.69□□□□□ -1.98
H3BM21 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
H3BM21 SNORD63B-201ENST00000411005 70 ntBASIC2.68□□□□□ -1.98
H3BM21 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.68□□□□□ -1.98
H3BM21 AC097510.1-201ENST00000510945 133 ntBASIC2.68□□□□□ -1.98
H3BM21 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.68□□□□□ -1.98
H3BM21 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.68□□□□□ -1.98
H3BM21 MIR4251-201ENST00000635819 61 ntBASIC2.68□□□□□ -1.98
H3BM21 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
H3BM21 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.67□□□□□ -1.98
H3BM21 RNU6-369P-201ENST00000362515 102 ntBASIC2.67□□□□□ -1.98
H3BM21 RNU1-112P-201ENST00000364401 164 ntBASIC2.67□□□□□ -1.98
H3BM21 MIR520C-201ENST00000385005 87 ntBASIC2.67□□□□□ -1.98
H3BM21 RPS27P16-201ENST00000425758 201 ntBASIC2.67□□□□□ -1.98
H3BM21 AC011753.1-201ENST00000451001 220 ntBASIC2.67□□□□□ -1.98
H3BM21 snoU13.2-201ENST00000459201 104 ntBASIC2.67□□□□□ -1.98
H3BM21 RNU6-1194P-201ENST00000516208 104 ntBASIC2.67□□□□□ -1.98
H3BM21 MIR3935-201ENST00000583472 104 ntBASIC2.67□□□□□ -1.98
H3BM21 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
H3BM21 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.66□□□□□ -1.98
H3BM21 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
H3BM21 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.66□□□□□ -1.98
H3BM21 RNU1-58P-201ENST00000362413 163 ntBASIC2.66□□□□□ -1.98
H3BM21 RNA5SP393-201ENST00000363423 117 ntBASIC2.66□□□□□ -1.98
H3BM21 RNU6-824P-201ENST00000363724 104 ntBASIC2.66□□□□□ -1.98
H3BM21 RNA5SP508-201ENST00000411327 119 ntBASIC2.66□□□□□ -1.98
H3BM21 SNORA4-201ENST00000584302 138 ntBASIC2.66□□□□□ -1.98
H3BM21 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.66□□□□□ -1.98
H3BM21 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.66□□□□□ -1.98
H3BM21 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
H3BM21 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
H3BM21 RNA5SP117-201ENST00000365294 118 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 211.7 ms