Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.23□□□□□ -2.37
TRBV7-9A0A0J9YWB2 Y_RNA.52-201ENST00000362760 96 ntBASIC0.22□□□□□ -2.37
TRBV7-9A0A0J9YWB2 Y_RNA.75-201ENST00000362927 97 ntBASIC0.22□□□□□ -2.37
TRBV7-9A0A0J9YWB2 RNA5SP62-201ENST00000363457 110 ntBASIC0.22□□□□□ -2.37
TRBV7-9A0A0J9YWB2 RNU6-1082P-201ENST00000364574 107 ntBASIC0.22□□□□□ -2.37
TRBV7-9A0A0J9YWB2 SNORA20.1-201ENST00000364790 130 ntBASIC0.22□□□□□ -2.37
TRBV7-9A0A0J9YWB2 RNU6-918P-201ENST00000391219 106 ntBASIC0.22□□□□□ -2.37
TRBV7-9A0A0J9YWB2 MIR548J-201ENST00000408833 112 ntBASIC0.22□□□□□ -2.37
TRBV7-9A0A0J9YWB2 RNA5SP144-201ENST00000410846 116 ntBASIC0.22□□□□□ -2.37
TRBV7-9A0A0J9YWB2 RNU6-893P-201ENST00000458841 100 ntBASIC0.22□□□□□ -2.37
TRBV7-9A0A0J9YWB2 RNU7-79P-201ENST00000516082 62 ntBASIC0.22□□□□□ -2.37
TRBV7-9A0A0J9YWB2 Y_RNA.697-201ENST00000516776 113 ntBASIC0.22□□□□□ -2.37
TRBV7-9A0A0J9YWB2 MIR4452-201ENST00000583004 71 ntBASIC0.22□□□□□ -2.37
TRBV7-9A0A0J9YWB2 AC243829.6-201ENST00000612652 106 ntBASIC0.22□□□□□ -2.37
TRBV7-9A0A0J9YWB2 MIR8070-201ENST00000616510 88 ntBASIC0.22□□□□□ -2.37
TRBV7-9A0A0J9YWB2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.22□□□□□ -2.37
TRBV7-9A0A0J9YWB2 RNU6-349P-201ENST00000362402 107 ntBASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 Y_RNA.307-201ENST00000365022 117 ntBASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-1327P-201ENST00000365302 105 ntBASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-47P-201ENST00000383866 107 ntBASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 SNORA32-201ENST00000384072 121 ntBASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-574P-201ENST00000384265 107 ntBASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-768P-201ENST00000384683 107 ntBASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-291P-201ENST00000384720 107 ntBASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-535P-201ENST00000384722 107 ntBASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU7-113P-201ENST00000459273 62 ntBASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-1023P-201ENST00000516137 106 ntBASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-765P-201ENST00000516916 99 ntBASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 U4.1-201ENST00000620349 87 ntBASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 MIR6513-201ENST00000621188 64 ntBASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 AC243829.3-201ENST00000622177 108 ntBASIC0.21□□□□□ -2.38
TRBV7-9A0A0J9YWB2 SNORA25.9-201ENST00000365087 128 ntBASIC0.2□□□□□ -2.38
TRBV7-9A0A0J9YWB2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.2□□□□□ -2.38
TRBV7-9A0A0J9YWB2 Y_RNA.447-201ENST00000384184 113 ntBASIC0.2□□□□□ -2.38
TRBV7-9A0A0J9YWB2 Y_RNA.536-201ENST00000384621 113 ntBASIC0.2□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.2□□□□□ -2.38
TRBV7-9A0A0J9YWB2 SUMO1P3-201ENST00000439961 304 ntBASIC0.2□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNA5SP33-201ENST00000516687 98 ntBASIC0.2□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNA5SP268-201ENST00000516828 124 ntBASIC0.2□□□□□ -2.38
TRBV7-9A0A0J9YWB2 DEFB131E-201ENST00000532329 154 ntBASIC0.2□□□□□ -2.38
TRBV7-9A0A0J9YWB2 MIR4431-201ENST00000579990 94 ntBASIC0.2□□□□□ -2.38
TRBV7-9A0A0J9YWB2 MIR4503-201ENST00000582187 83 ntBASIC0.2□□□□□ -2.38
TRBV7-9A0A0J9YWB2 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
TRBV7-9A0A0J9YWB2 Y_RNA.393-201ENST00000383936 102 ntBASIC0.19□□□□□ -2.38
TRBV7-9A0A0J9YWB2 AL022718.1-201ENST00000412004 84 ntBASIC0.19□□□□□ -2.38
TRBV7-9A0A0J9YWB2 AC073261.1-201ENST00000429409 121 ntBASIC0.19□□□□□ -2.38
TRBV7-9A0A0J9YWB2 MTND3P2-201ENST00000438452 342 ntBASIC0.19□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU7-35P-201ENST00000517174 62 ntBASIC0.19□□□□□ -2.38
TRBV7-9A0A0J9YWB2 AC078938.1-201ENST00000620993 318 ntBASIC0.19□□□□□ -2.38
TRBV7-9A0A0J9YWB2 MIR411-201ENST00000362239 96 ntBASIC0.18□□□□□ -2.38
TRBV7-9A0A0J9YWB2 Y_RNA.174-201ENST00000363781 105 ntBASIC0.18□□□□□ -2.38
TRBV7-9A0A0J9YWB2 Y_RNA.200-201ENST00000364018 102 ntBASIC0.18□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-702P-201ENST00000364982 107 ntBASIC0.18□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-815P-201ENST00000384080 113 ntBASIC0.18□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNA5SP236-201ENST00000516169 116 ntBASIC0.18□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-531P-201ENST00000516694 104 ntBASIC0.18□□□□□ -2.38
TRBV7-9A0A0J9YWB2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.18□□□□□ -2.38
TRBV7-9A0A0J9YWB2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
TRBV7-9A0A0J9YWB2 Y_RNA.83-201ENST00000363005 113 ntBASIC0.17□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNA5SP133-201ENST00000363368 119 ntBASIC0.17□□□□□ -2.38
TRBV7-9A0A0J9YWB2 Y_RNA.193-201ENST00000363979 102 ntBASIC0.17□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-690P-201ENST00000365242 106 ntBASIC0.17□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-196P-201ENST00000384315 107 ntBASIC0.17□□□□□ -2.38
TRBV7-9A0A0J9YWB2 AC069271.1-201ENST00000445577 156 ntBASIC0.17□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-1194P-201ENST00000516208 104 ntBASIC0.17□□□□□ -2.38
TRBV7-9A0A0J9YWB2 AC022559.1-201ENST00000520905 205 ntBASIC0.17□□□□□ -2.38
TRBV7-9A0A0J9YWB2 MIR7107-201ENST00000611489 80 ntBASIC0.17□□□□□ -2.38
TRBV7-9A0A0J9YWB2 U6.109-201ENST00000636749 87 ntBASIC0.17□□□□□ -2.38
TRBV7-9A0A0J9YWB2 Y_RNA.120-201ENST00000363304 110 ntBASIC0.16□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-1020P-201ENST00000363684 107 ntBASIC0.16□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNY1-201ENST00000364228 113 ntBASIC0.16□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-1229P-201ENST00000364295 107 ntBASIC0.16□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-818P-201ENST00000364837 108 ntBASIC0.16□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-1219P-201ENST00000516143 112 ntBASIC0.16□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNA5SP227-201ENST00000516184 113 ntBASIC0.16□□□□□ -2.38
TRBV7-9A0A0J9YWB2 RNU6-1223P-201ENST00000517124 104 ntBASIC0.16□□□□□ -2.38
TRBV7-9A0A0J9YWB2 MIR4711-201ENST00000578274 70 ntBASIC0.16□□□□□ -2.38
TRBV7-9A0A0J9YWB2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.16□□□□□ -2.38
TRBV7-9A0A0J9YWB2 Y_RNA.4-201ENST00000362333 112 ntBASIC0.15□□□□□ -2.39
TRBV7-9A0A0J9YWB2 RNA5SP245-201ENST00000364239 121 ntBASIC0.15□□□□□ -2.39
TRBV7-9A0A0J9YWB2 RNU2-59P-201ENST00000410482 191 ntBASIC0.15□□□□□ -2.39
TRBV7-9A0A0J9YWB2 AC107027.2-201ENST00000512197 115 ntBASIC0.15□□□□□ -2.39
TRBV7-9A0A0J9YWB2 RNU6-240P-201ENST00000516098 97 ntBASIC0.15□□□□□ -2.39
TRBV7-9A0A0J9YWB2 RNU2-35P-201ENST00000516446 142 ntBASIC0.15□□□□□ -2.39
TRBV7-9A0A0J9YWB2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.15□□□□□ -2.39
TRBV7-9A0A0J9YWB2 RNA5SP47-201ENST00000517230 109 ntBASIC0.15□□□□□ -2.39
TRBV7-9A0A0J9YWB2 MIR548AE2-201ENST00000583456 67 ntBASIC0.15□□□□□ -2.39
TRBV7-9A0A0J9YWB2 MIR3149-201ENST00000584629 83 ntBASIC0.15□□□□□ -2.39
TRBV7-9A0A0J9YWB2 SNORA63.5-201ENST00000363548 123 ntBASIC0.14□□□□□ -2.39
TRBV7-9A0A0J9YWB2 SNORD28-201ENST00000384706 75 ntBASIC0.14□□□□□ -2.39
TRBV7-9A0A0J9YWB2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
TRBV7-9A0A0J9YWB2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.14□□□□□ -2.39
TRBV7-9A0A0J9YWB2 RNU6-588P-201ENST00000410281 105 ntBASIC0.14□□□□□ -2.39
TRBV7-9A0A0J9YWB2 RNA5SP247-201ENST00000411181 105 ntBASIC0.14□□□□□ -2.39
TRBV7-9A0A0J9YWB2 Y_RNA.793-201ENST00000411222 111 ntBASIC0.14□□□□□ -2.39
TRBV7-9A0A0J9YWB2 SNORD67.1-201ENST00000516618 108 ntBASIC0.14□□□□□ -2.39
TRBV7-9A0A0J9YWB2 AC069113.3-201ENST00000521019 150 ntBASIC0.14□□□□□ -2.39
TRBV7-9A0A0J9YWB2 MIR4305-201ENST00000583252 102 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms