Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 REXO1L6P-202ENST00000619970 1078 ntBASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 MTMR9LP-203ENST00000426597 1545 ntBASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 IGHGP-201ENST00000390555 1178 ntBASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 AL121912.1-201ENST00000603683 238 ntBASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 AC034236.2-201ENST00000606662 1610 ntBASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
COL27A1Q8IZC6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 AC005336.2-201ENST00000593183 939 ntBASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 KRT89P-201ENST00000620027 1478 ntBASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 NSUN5P1-202ENST00000421140 1535 ntBASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 NSUN5P2-203ENST00000457352 1529 ntBASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 AC006333.2-201ENST00000607957 2099 ntBASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL27A1Q8IZC6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 AP003733.1-201ENST00000491725 852 ntBASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 KRT8P32-201ENST00000512863 1461 ntBASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms