Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 LGALS14-201ENST00000360675 773 ntAPPRIS P3 TSL 3 BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 AL354692.1-201ENST00000423044 315 ntBASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC012618.2-201ENST00000428058 849 ntBASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 MTCO1P47-201ENST00000523889 1271 ntBASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 RARRES2P10-201ENST00000564312 460 ntBASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 Z99916.2-201ENST00000604037 246 ntBASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 AL049536.1-201ENST00000625043 744 ntBASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC006927.2-201ENST00000639256 389 ntBASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 AL158211.5-201ENST00000623583 2518 ntBASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 TSN-202ENST00000409193 1436 ntTSL 5 BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 AL390835.1-201ENST00000413941 901 ntTSL 5 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 KRT16P5-201ENST00000455284 522 ntBASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 SUZ12P1-207ENST00000583950 741 ntTSL 5 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC006946.3-201ENST00000609791 756 ntBASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC087683.2-201ENST00000611384 326 ntBASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PPP4R3CPQ6ZMV5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PPP4R3CPQ6ZMV5 CCNG2-205ENST00000509972 1549 ntTSL 2 BASIC21.7■■□□□ 1.07
PPP4R3CPQ6ZMV5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 C9orf135-201ENST00000377197 873 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 RN7SKP38-201ENST00000410782 309 ntBASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 CARD8-214ENST00000520007 614 ntTSL 2 BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC233702.5-201ENST00000584107 538 ntBASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC021766.1-201ENST00000624404 741 ntBASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC104794.2-201ENST00000567540 1572 ntBASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.7■■□□□ 1.06
PPP4R3CPQ6ZMV5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R3CPQ6ZMV5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.69■■□□□ 1.06
PPP4R3CPQ6ZMV5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.69■■□□□ 1.06
PPP4R3CPQ6ZMV5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R3CPQ6ZMV5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R3CPQ6ZMV5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R3CPQ6ZMV5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.69■■□□□ 1.06
PPP4R3CPQ6ZMV5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R3CPQ6ZMV5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R3CPQ6ZMV5 AL365338.1-201ENST00000422282 858 ntBASIC21.69■■□□□ 1.06
PPP4R3CPQ6ZMV5 AL596275.1-201ENST00000423464 877 ntBASIC21.69■■□□□ 1.06
PPP4R3CPQ6ZMV5 TAAR4P-201ENST00000454843 1039 ntBASIC21.69■■□□□ 1.06
PPP4R3CPQ6ZMV5 AL122001.1-201ENST00000457027 370 ntBASIC21.69■■□□□ 1.06
PPP4R3CPQ6ZMV5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R3CPQ6ZMV5 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R3CPQ6ZMV5 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms