Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 AC034236.2-201ENST00000606662 1610 ntBASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 IGHGP-201ENST00000390555 1178 ntBASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPAQ5VT25 KRT8P32-201ENST00000512863 1461 ntBASIC28.53■■■□□ 2.16
CDC42BPAQ5VT25 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC28.53■■■□□ 2.16
CDC42BPAQ5VT25 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC28.53■■■□□ 2.16
CDC42BPAQ5VT25 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDC42BPAQ5VT25 AP003733.1-201ENST00000491725 852 ntBASIC28.53■■■□□ 2.16
CDC42BPAQ5VT25 RNA5SP419-201ENST00000515908 135 ntBASIC28.53■■■□□ 2.16
CDC42BPAQ5VT25 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC28.53■■■□□ 2.16
CDC42BPAQ5VT25 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC28.53■■■□□ 2.16
CDC42BPAQ5VT25 AC120114.3-201ENST00000611923 658 ntBASIC28.53■■■□□ 2.16
CDC42BPAQ5VT25 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDC42BPAQ5VT25 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC28.53■■■□□ 2.16
CDC42BPAQ5VT25 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDC42BPAQ5VT25 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC28.53■■■□□ 2.16
CDC42BPAQ5VT25 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDC42BPAQ5VT25 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDC42BPAQ5VT25 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDC42BPAQ5VT25 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 IGHV3-47-201ENST00000425060 335 ntBASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 UBQLN4P1-201ENST00000461599 1801 ntBASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 CYP51A1P1-201ENST00000492267 1507 ntBASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC28.52■■■□□ 2.16
CDC42BPAQ5VT25 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
CDC42BPAQ5VT25 MTMR9LP-203ENST00000426597 1545 ntBASIC28.51■■■□□ 2.15
CDC42BPAQ5VT25 AC006333.2-201ENST00000607957 2099 ntBASIC28.51■■■□□ 2.15
CDC42BPAQ5VT25 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CDC42BPAQ5VT25 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC28.51■■■□□ 2.15
CDC42BPAQ5VT25 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC28.51■■■□□ 2.15
CDC42BPAQ5VT25 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC28.51■■■□□ 2.15
CDC42BPAQ5VT25 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
CDC42BPAQ5VT25 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC28.51■■■□□ 2.15
CDC42BPAQ5VT25 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CDC42BPAQ5VT25 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC28.5■■■□□ 2.15
CDC42BPAQ5VT25 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC28.5■■■□□ 2.15
CDC42BPAQ5VT25 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CDC42BPAQ5VT25 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CDC42BPAQ5VT25 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC28.5■■■□□ 2.15
CDC42BPAQ5VT25 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CDC42BPAQ5VT25 KRT89P-201ENST00000620027 1478 ntBASIC28.5■■■□□ 2.15
CDC42BPAQ5VT25 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CDC42BPAQ5VT25 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CDC42BPAQ5VT25 NSUN5P1-202ENST00000421140 1535 ntBASIC28.49■■■□□ 2.15
CDC42BPAQ5VT25 NSUN5P2-203ENST00000457352 1529 ntBASIC28.49■■■□□ 2.15
CDC42BPAQ5VT25 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CDC42BPAQ5VT25 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CDC42BPAQ5VT25 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CDC42BPAQ5VT25 AC090616.6-201ENST00000582640 721 ntBASIC28.49■■■□□ 2.15
CDC42BPAQ5VT25 AL121772.3-201ENST00000610840 674 ntBASIC28.49■■■□□ 2.15
CDC42BPAQ5VT25 REXO1L6P-202ENST00000619970 1078 ntBASIC28.49■■■□□ 2.15
CDC42BPAQ5VT25 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC28.49■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms