Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
GRIA1P42261 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.12■□□□□ 0.65
GRIA1P42261 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA1P42261 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.12■□□□□ 0.65
GRIA1P42261 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA1P42261 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
GRIA1P42261 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA1P42261 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA1P42261 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
GRIA1P42261 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA1P42261 MTMR9LP-203ENST00000426597 1545 ntBASIC19.12■□□□□ 0.65
GRIA1P42261 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.12■□□□□ 0.65
GRIA1P42261 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA1P42261 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA1P42261 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.12■□□□□ 0.65
GRIA1P42261 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
GRIA1P42261 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
GRIA1P42261 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
GRIA1P42261 AL353807.1-201ENST00000427475 662 ntBASIC19.12■□□□□ 0.65
GRIA1P42261 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.12■□□□□ 0.65
GRIA1P42261 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.12■□□□□ 0.65
GRIA1P42261 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.12■□□□□ 0.65
GRIA1P42261 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.12■□□□□ 0.65
GRIA1P42261 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.12■□□□□ 0.65
GRIA1P42261 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
GRIA1P42261 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.12■□□□□ 0.65
GRIA1P42261 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.12■□□□□ 0.65
GRIA1P42261 AC073195.1-201ENST00000607241 877 ntBASIC19.12■□□□□ 0.65
GRIA1P42261 AC011298.2-201ENST00000617989 482 ntBASIC19.12■□□□□ 0.65
GRIA1P42261 AC130371.2-201ENST00000619443 611 ntBASIC19.12■□□□□ 0.65
GRIA1P42261 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA1P42261 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.12■□□□□ 0.65
GRIA1P42261 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA1P42261 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA1P42261 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA1P42261 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
GRIA1P42261 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.12■□□□□ 0.65
GRIA1P42261 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.11■□□□□ 0.65
GRIA1P42261 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.11■□□□□ 0.65
GRIA1P42261 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.11■□□□□ 0.65
GRIA1P42261 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.11■□□□□ 0.65
GRIA1P42261 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.11■□□□□ 0.65
GRIA1P42261 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.11■□□□□ 0.65
GRIA1P42261 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.11■□□□□ 0.65
GRIA1P42261 MESTP1-201ENST00000404287 994 ntBASIC19.11■□□□□ 0.65
GRIA1P42261 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
GRIA1P42261 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.11■□□□□ 0.65
GRIA1P42261 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.11■□□□□ 0.65
GRIA1P42261 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.11■□□□□ 0.65
GRIA1P42261 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.11■□□□□ 0.65
GRIA1P42261 AL031985.4-201ENST00000642138 673 ntBASIC19.11■□□□□ 0.65
GRIA1P42261 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
GRIA1P42261 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.11■□□□□ 0.65
GRIA1P42261 AC020763.4-201ENST00000623414 4170 ntBASIC19.11■□□□□ 0.65
GRIA1P42261 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
GRIA1P42261 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.11■□□□□ 0.65
GRIA1P42261 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.11■□□□□ 0.65
GRIA1P42261 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
GRIA1P42261 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
GRIA1P42261 AC135050.7-201ENST00000624508 2218 ntBASIC19.1■□□□□ 0.65
GRIA1P42261 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GRIA1P42261 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.1■□□□□ 0.65
GRIA1P42261 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
GRIA1P42261 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GRIA1P42261 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
GRIA1P42261 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.1■□□□□ 0.65
GRIA1P42261 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
GRIA1P42261 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GRIA1P42261 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.1■□□□□ 0.65
GRIA1P42261 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.1■□□□□ 0.65
GRIA1P42261 PRSS44-201ENST00000515154 1146 ntBASIC19.1■□□□□ 0.65
GRIA1P42261 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GRIA1P42261 AC068587.9-201ENST00000641814 219 ntBASIC19.1■□□□□ 0.65
GRIA1P42261 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.1■□□□□ 0.65
GRIA1P42261 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GRIA1P42261 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GRIA1P42261 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
GRIA1P42261 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GRIA1P42261 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.1■□□□□ 0.65
GRIA1P42261 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.1■□□□□ 0.65
GRIA1P42261 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.1■□□□□ 0.65
GRIA1P42261 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GRIA1P42261 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms