Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc1P35601 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc1P35601 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc1P35601 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc1P35601 Gm15378-201ENSMUST00000121894 207 ntBASIC16.92■□□□□ 0.3
Rfc1P35601 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Rfc1P35601 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rfc1P35601 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.92■□□□□ 0.3
Rfc1P35601 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc1P35601 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc1P35601 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc1P35601 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc1P35601 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc1P35601 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc1P35601 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc1P35601 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc1P35601 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc1P35601 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc1P35601 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Rfc1P35601 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc1P35601 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc1P35601 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc1P35601 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc1P35601 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc1P35601 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
Rfc1P35601 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc1P35601 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Rfc1P35601 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc1P35601 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rfc1P35601 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc1P35601 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc1P35601 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc1P35601 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc1P35601 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.91■□□□□ 0.3
Rfc1P35601 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.91■□□□□ 0.3
Rfc1P35601 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc1P35601 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc1P35601 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.91■□□□□ 0.3
Rfc1P35601 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc1P35601 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rfc1P35601 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Rfc1P35601 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rfc1P35601 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Rfc1P35601 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rfc1P35601 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.9■□□□□ 0.3
Rfc1P35601 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rfc1P35601 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.9■□□□□ 0.3
Rfc1P35601 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rfc1P35601 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Rfc1P35601 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rfc1P35601 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc1P35601 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc1P35601 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc1P35601 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rfc1P35601 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc1P35601 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc1P35601 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc1P35601 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc1P35601 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc1P35601 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc1P35601 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc1P35601 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc1P35601 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc1P35601 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rfc1P35601 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rfc1P35601 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc1P35601 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc1P35601 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.88■□□□□ 0.29
Rfc1P35601 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc1P35601 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc1P35601 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc1P35601 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc1P35601 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rfc1P35601 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc1P35601 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms