Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 MINOS1P3-201ENST00000457048 203 ntBASIC20.39■□□□□ 0.85
TIMP1P01033 AC091607.1-201ENST00000490318 1060 ntBASIC20.39■□□□□ 0.85
TIMP1P01033 RNPS1P1-201ENST00000507437 918 ntBASIC20.39■□□□□ 0.85
TIMP1P01033 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.39■□□□□ 0.85
TIMP1P01033 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.39■□□□□ 0.85
TIMP1P01033 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.39■□□□□ 0.85
TIMP1P01033 AC106730.1-201ENST00000566722 1090 ntBASIC20.39■□□□□ 0.85
TIMP1P01033 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.39■□□□□ 0.85
TIMP1P01033 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.39■□□□□ 0.85
TIMP1P01033 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.39■□□□□ 0.85
TIMP1P01033 AC024563.2-201ENST00000603282 481 ntBASIC20.39■□□□□ 0.85
TIMP1P01033 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
TIMP1P01033 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TIMP1P01033 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.39■□□□□ 0.85
TIMP1P01033 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.39■□□□□ 0.85
TIMP1P01033 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TIMP1P01033 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP1P01033 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.38■□□□□ 0.85
TIMP1P01033 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.38■□□□□ 0.85
TIMP1P01033 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.38■□□□□ 0.85
TIMP1P01033 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP1P01033 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.38■□□□□ 0.85
TIMP1P01033 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP1P01033 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.38■□□□□ 0.85
TIMP1P01033 MIR564-202ENST00000385049 94 ntBASIC20.38■□□□□ 0.85
TIMP1P01033 AF186996.4-201ENST00000467186 377 ntBASIC20.38■□□□□ 0.85
TIMP1P01033 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.38■□□□□ 0.85
TIMP1P01033 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.38■□□□□ 0.85
TIMP1P01033 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.38■□□□□ 0.85
TIMP1P01033 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.38■□□□□ 0.85
TIMP1P01033 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP1P01033 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP1P01033 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.38■□□□□ 0.85
TIMP1P01033 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP1P01033 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP1P01033 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP1P01033 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP1P01033 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP1P01033 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TIMP1P01033 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.37■□□□□ 0.85
TIMP1P01033 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.37■□□□□ 0.85
TIMP1P01033 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TIMP1P01033 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TIMP1P01033 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TIMP1P01033 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TIMP1P01033 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TIMP1P01033 AC093909.1-201ENST00000504731 1122 ntBASIC20.37■□□□□ 0.85
TIMP1P01033 POLD2P1-201ENST00000511220 997 ntBASIC20.37■□□□□ 0.85
TIMP1P01033 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.37■□□□□ 0.85
TIMP1P01033 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.37■□□□□ 0.85
TIMP1P01033 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TIMP1P01033 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.37■□□□□ 0.85
TIMP1P01033 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TIMP1P01033 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TIMP1P01033 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TIMP1P01033 LINC00565-201ENST00000562710 2331 ntBASIC20.37■□□□□ 0.85
TIMP1P01033 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TIMP1P01033 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TIMP1P01033 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TIMP1P01033 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TIMP1P01033 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TIMP1P01033 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TIMP1P01033 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TIMP1P01033 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TIMP1P01033 PMS2P7-201ENST00000506558 1336 ntBASIC20.36■□□□□ 0.85
TIMP1P01033 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
TIMP1P01033 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.36■□□□□ 0.85
TIMP1P01033 AC009065.1-201ENST00000564055 1225 ntBASIC20.36■□□□□ 0.85
TIMP1P01033 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.36■□□□□ 0.85
TIMP1P01033 AC011840.4-201ENST00000578471 627 ntBASIC20.36■□□□□ 0.85
TIMP1P01033 AC148477.8-201ENST00000624298 468 ntBASIC20.36■□□□□ 0.85
TIMP1P01033 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TIMP1P01033 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TIMP1P01033 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TIMP1P01033 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.36■□□□□ 0.85
TIMP1P01033 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.35■□□□□ 0.85
TIMP1P01033 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.35■□□□□ 0.85
TIMP1P01033 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TIMP1P01033 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TIMP1P01033 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TIMP1P01033 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TIMP1P01033 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TIMP1P01033 FAM220CP-201ENST00000395253 831 ntBASIC20.35■□□□□ 0.85
TIMP1P01033 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.35■□□□□ 0.85
TIMP1P01033 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TIMP1P01033 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.35■□□□□ 0.85
TIMP1P01033 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.35■□□□□ 0.85
TIMP1P01033 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.35■□□□□ 0.85
TIMP1P01033 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TIMP1P01033 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TIMP1P01033 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TIMP1P01033 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP1P01033 AL353692.3-201ENST00000407031 1396 ntBASIC20.34■□□□□ 0.85
TIMP1P01033 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP1P01033 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP1P01033 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP1P01033 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TIMP1P01033 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP1P01033 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP1P01033 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms