Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCA1O95477 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ABCA1O95477 SPDYE13P-201ENST00000445314 798 ntBASIC15.8■□□□□ 0.12
ABCA1O95477 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.8■□□□□ 0.12
ABCA1O95477 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.8■□□□□ 0.12
ABCA1O95477 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.8■□□□□ 0.12
ABCA1O95477 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
ABCA1O95477 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.8■□□□□ 0.12
ABCA1O95477 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ABCA1O95477 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCA1O95477 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ABCA1O95477 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCA1O95477 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCA1O95477 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCA1O95477 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCA1O95477 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ABCA1O95477 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCA1O95477 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCA1O95477 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCA1O95477 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCA1O95477 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.79■□□□□ 0.12
ABCA1O95477 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.79■□□□□ 0.12
ABCA1O95477 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ABCA1O95477 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA1O95477 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA1O95477 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA1O95477 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.79■□□□□ 0.12
ABCA1O95477 UNC93B7-201ENST00000509439 705 ntBASIC15.79■□□□□ 0.12
ABCA1O95477 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
ABCA1O95477 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.79■□□□□ 0.12
ABCA1O95477 CKBP1-201ENST00000565489 1086 ntBASIC15.79■□□□□ 0.12
ABCA1O95477 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ABCA1O95477 AC004263.2-201ENST00000617183 678 ntBASIC15.79■□□□□ 0.12
ABCA1O95477 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.79■□□□□ 0.12
ABCA1O95477 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.79■□□□□ 0.12
ABCA1O95477 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ABCA1O95477 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA1O95477 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.79■□□□□ 0.12
ABCA1O95477 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA1O95477 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA1O95477 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA1O95477 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.79■□□□□ 0.12
ABCA1O95477 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.79■□□□□ 0.12
ABCA1O95477 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA1O95477 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
ABCA1O95477 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ABCA1O95477 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.79■□□□□ 0.12
ABCA1O95477 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA1O95477 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA1O95477 GCSHP2-201ENST00000560971 527 ntBASIC15.79■□□□□ 0.12
ABCA1O95477 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.79■□□□□ 0.12
ABCA1O95477 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.79■□□□□ 0.12
ABCA1O95477 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.79■□□□□ 0.12
ABCA1O95477 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA1O95477 AC125437.2-201ENST00000625180 2167 ntBASIC15.79■□□□□ 0.12
ABCA1O95477 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ABCA1O95477 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.79■□□□□ 0.12
ABCA1O95477 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.78■□□□□ 0.12
ABCA1O95477 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.78■□□□□ 0.12
ABCA1O95477 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.78■□□□□ 0.12
ABCA1O95477 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA1O95477 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.78■□□□□ 0.12
ABCA1O95477 AC087289.5-201ENST00000586076 3175 ntBASIC15.78■□□□□ 0.12
ABCA1O95477 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA1O95477 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ABCA1O95477 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA1O95477 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA1O95477 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA1O95477 CR769767.2-201ENST00000622735 460 ntBASIC15.78■□□□□ 0.12
ABCA1O95477 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
ABCA1O95477 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA1O95477 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA1O95477 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.78■□□□□ 0.12
ABCA1O95477 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA1O95477 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA1O95477 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
ABCA1O95477 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA1O95477 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA1O95477 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA1O95477 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA1O95477 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA1O95477 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.78■□□□□ 0.12
ABCA1O95477 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ABCA1O95477 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.78■□□□□ 0.12
ABCA1O95477 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.78■□□□□ 0.12
ABCA1O95477 AP001271.2-201ENST00000624018 1556 ntBASIC15.77■□□□□ 0.12
ABCA1O95477 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
ABCA1O95477 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
ABCA1O95477 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ABCA1O95477 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ABCA1O95477 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.77■□□□□ 0.12
ABCA1O95477 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ABCA1O95477 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ABCA1O95477 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ABCA1O95477 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.77■□□□□ 0.11
ABCA1O95477 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
ABCA1O95477 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ABCA1O95477 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ABCA1O95477 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ABCA1O95477 AP002383.4-201ENST00000442518 975 ntBASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms