Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm14464-201ENSMUST00000119658 1254 ntBASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm13034-201ENSMUST00000121342 3177 ntBASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm43352-201ENSMUST00000196419 3065 ntBASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4-3A0A0B4J1K1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm26524-201ENSMUST00000192339 390 ntBASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms