Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AL049779.4-201ENST00000604500 156 ntBASIC2.53□□□□□ -2
HRH3Q9Y5N1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
HRH3Q9Y5N1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HRH3Q9Y5N1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.52□□□□□ -2.01
HRH3Q9Y5N1 AL138827.1-201ENST00000402666 306 ntBASIC2.52□□□□□ -2.01
HRH3Q9Y5N1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.52□□□□□ -2.01
HRH3Q9Y5N1 AL357312.1-201ENST00000603879 298 ntBASIC2.52□□□□□ -2.01
HRH3Q9Y5N1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HRH3Q9Y5N1 Y_RNA.57-201ENST00000362806 113 ntBASIC2.51□□□□□ -2.01
HRH3Q9Y5N1 RPS27P21-201ENST00000486977 252 ntBASIC2.51□□□□□ -2.01
HRH3Q9Y5N1 MIR4500-201ENST00000579472 76 ntBASIC2.51□□□□□ -2.01
HRH3Q9Y5N1 MIR3945-201ENST00000581853 98 ntBASIC2.51□□□□□ -2.01
HRH3Q9Y5N1 MIR3124-201ENST00000582636 67 ntBASIC2.51□□□□□ -2.01
HRH3Q9Y5N1 Y_RNA.94-201ENST00000363068 106 ntBASIC2.5□□□□□ -2.01
HRH3Q9Y5N1 RNU6-396P-201ENST00000365369 105 ntBASIC2.5□□□□□ -2.01
HRH3Q9Y5N1 MIR513A1-201ENST00000385138 129 ntBASIC2.5□□□□□ -2.01
HRH3Q9Y5N1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HRH3Q9Y5N1 snoU13.2-201ENST00000459201 104 ntBASIC2.5□□□□□ -2.01
HRH3Q9Y5N1 SNORA31.25-201ENST00000517242 134 ntBASIC2.5□□□□□ -2.01
HRH3Q9Y5N1 AC090897.1-201ENST00000580909 226 ntBASIC2.5□□□□□ -2.01
HRH3Q9Y5N1 MIR4712-201ENST00000583750 82 ntBASIC2.5□□□□□ -2.01
HRH3Q9Y5N1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.49□□□□□ -2.01
HRH3Q9Y5N1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
HRH3Q9Y5N1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
HRH3Q9Y5N1 WWP1P1-201ENST00000466609 2769 ntBASIC2.49□□□□□ -2.01
HRH3Q9Y5N1 MIR588-201ENST00000384900 83 ntBASIC2.49□□□□□ -2.01
HRH3Q9Y5N1 AC140658.3-201ENST00000567603 271 ntBASIC2.49□□□□□ -2.01
HRH3Q9Y5N1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.49□□□□□ -2.01
HRH3Q9Y5N1 AL512598.1-201ENST00000610158 273 ntBASIC2.49□□□□□ -2.01
HRH3Q9Y5N1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.49□□□□□ -2.01
HRH3Q9Y5N1 AL096861.1-201ENST00000610899 123 ntBASIC2.49□□□□□ -2.01
HRH3Q9Y5N1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HRH3Q9Y5N1 RNA5SP393-201ENST00000363423 117 ntBASIC2.48□□□□□ -2.01
HRH3Q9Y5N1 DEFA7P-201ENST00000382676 285 ntBASIC2.48□□□□□ -2.01
HRH3Q9Y5N1 MIR196B-201ENST00000384852 84 ntBASIC2.48□□□□□ -2.01
HRH3Q9Y5N1 MIR194-1-201ENST00000384892 85 ntBASIC2.48□□□□□ -2.01
HRH3Q9Y5N1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.48□□□□□ -2.01
HRH3Q9Y5N1 SUMO1P4-201ENST00000429430 302 ntBASIC2.48□□□□□ -2.01
HRH3Q9Y5N1 AC067747.1-201ENST00000608026 250 ntBASIC2.48□□□□□ -2.01
HRH3Q9Y5N1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.48□□□□□ -2.01
HRH3Q9Y5N1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.47□□□□□ -2.01
HRH3Q9Y5N1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.47□□□□□ -2.01
HRH3Q9Y5N1 RNU4-32P-201ENST00000363404 141 ntBASIC2.47□□□□□ -2.01
HRH3Q9Y5N1 RNA5SP21-201ENST00000410917 96 ntBASIC2.47□□□□□ -2.01
HRH3Q9Y5N1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.47□□□□□ -2.01
HRH3Q9Y5N1 SNORA4-201ENST00000584302 138 ntBASIC2.47□□□□□ -2.01
HRH3Q9Y5N1 AC020891.4-201ENST00000605745 93 ntBASIC2.47□□□□□ -2.01
HRH3Q9Y5N1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
HRH3Q9Y5N1 RNU6-315P-201ENST00000362666 107 ntBASIC2.46□□□□□ -2.02
HRH3Q9Y5N1 RNA5SP133-201ENST00000363368 119 ntBASIC2.46□□□□□ -2.02
HRH3Q9Y5N1 RNA5SP68-201ENST00000363885 119 ntBASIC2.46□□□□□ -2.02
HRH3Q9Y5N1 RNU6-571P-201ENST00000384128 107 ntBASIC2.46□□□□□ -2.02
HRH3Q9Y5N1 RNU1-52P-201ENST00000384190 164 ntBASIC2.46□□□□□ -2.02
HRH3Q9Y5N1 MIR9-1-201ENST00000385198 89 ntBASIC2.46□□□□□ -2.02
HRH3Q9Y5N1 RNU6-380P-201ENST00000410207 107 ntBASIC2.46□□□□□ -2.02
HRH3Q9Y5N1 JTBP1-201ENST00000441314 247 ntBASIC2.46□□□□□ -2.02
HRH3Q9Y5N1 RNU7-193P-201ENST00000516723 65 ntBASIC2.46□□□□□ -2.02
HRH3Q9Y5N1 MIR5194-201ENST00000582634 120 ntBASIC2.46□□□□□ -2.02
HRH3Q9Y5N1 PRELID3BP2-201ENST00000605362 201 ntBASIC2.46□□□□□ -2.02
HRH3Q9Y5N1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.46□□□□□ -2.02
HRH3Q9Y5N1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 SNORA3A-201ENST00000364113 130 ntBASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 RNU6-129P-201ENST00000391022 107 ntBASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 MIR889-201ENST00000401280 79 ntBASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 AC244023.1-201ENST00000426884 112 ntBASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 SNRPGP12-201ENST00000449481 213 ntBASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 SNORD4B-201ENST00000459083 72 ntBASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 RNA5SP445-201ENST00000515889 115 ntBASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 RNU6-922P-201ENST00000516753 99 ntBASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 MIR4264-201ENST00000583520 66 ntBASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 AC242498.1-201ENST00000604134 111 ntBASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 U6.109-201ENST00000636749 87 ntBASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HRH3Q9Y5N1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.44□□□□□ -2.02
HRH3Q9Y5N1 MIR26A1-201ENST00000362205 77 ntBASIC2.44□□□□□ -2.02
HRH3Q9Y5N1 RNU6-1094P-201ENST00000362416 104 ntBASIC2.44□□□□□ -2.02
HRH3Q9Y5N1 RNA5SP212-201ENST00000391223 107 ntBASIC2.44□□□□□ -2.02
HRH3Q9Y5N1 AC087499.7-201ENST00000441958 109 ntBASIC2.44□□□□□ -2.02
HRH3Q9Y5N1 SNORA25.13-201ENST00000516395 103 ntBASIC2.44□□□□□ -2.02
HRH3Q9Y5N1 RNU6-850P-201ENST00000516934 103 ntBASIC2.44□□□□□ -2.02
HRH3Q9Y5N1 AC138749.4-201ENST00000563970 127 ntBASIC2.44□□□□□ -2.02
HRH3Q9Y5N1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.44□□□□□ -2.02
HRH3Q9Y5N1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HRH3Q9Y5N1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HRH3Q9Y5N1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HRH3Q9Y5N1 RNU6-859P-201ENST00000362728 107 ntBASIC2.43□□□□□ -2.02
HRH3Q9Y5N1 Y_RNA.119-201ENST00000363301 96 ntBASIC2.43□□□□□ -2.02
HRH3Q9Y5N1 SNORA67.4-201ENST00000384688 142 ntBASIC2.43□□□□□ -2.02
HRH3Q9Y5N1 HSPE1P24-201ENST00000450782 238 ntBASIC2.43□□□□□ -2.02
HRH3Q9Y5N1 snoU13.11-201ENST00000459219 104 ntBASIC2.43□□□□□ -2.02
HRH3Q9Y5N1 AC139453.2-201ENST00000487255 133 ntBASIC2.43□□□□□ -2.02
HRH3Q9Y5N1 SNORA9.3-201ENST00000516383 129 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms