Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AP000753.3-201ENST00000604083 169 ntBASIC2.45□□□□□ -2.02
PCDHGA11Q9Y5H2 MIR8074-201ENST00000615081 81 ntBASIC2.45□□□□□ -2.02
PCDHGA11Q9Y5H2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PCDHGA11Q9Y5H2 AC080100.1-201ENST00000624239 5356 ntBASIC2.45□□□□□ -2.02
PCDHGA11Q9Y5H2 Y_RNA.73-201ENST00000362910 113 ntBASIC2.44□□□□□ -2.02
PCDHGA11Q9Y5H2 RNU6-949P-201ENST00000384040 107 ntBASIC2.44□□□□□ -2.02
PCDHGA11Q9Y5H2 RNU6-1124P-201ENST00000384169 107 ntBASIC2.44□□□□□ -2.02
PCDHGA11Q9Y5H2 RNU6-439P-201ENST00000384188 106 ntBASIC2.44□□□□□ -2.02
PCDHGA11Q9Y5H2 MIR144-201ENST00000384886 86 ntBASIC2.44□□□□□ -2.02
PCDHGA11Q9Y5H2 RNU1-98P-201ENST00000458992 160 ntBASIC2.44□□□□□ -2.02
PCDHGA11Q9Y5H2 RPS29P11-201ENST00000496507 171 ntBASIC2.44□□□□□ -2.02
PCDHGA11Q9Y5H2 MIR3192-201ENST00000584920 77 ntBASIC2.44□□□□□ -2.02
PCDHGA11Q9Y5H2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHGA11Q9Y5H2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHGA11Q9Y5H2 RNA5SP456-201ENST00000364002 114 ntBASIC2.43□□□□□ -2.02
PCDHGA11Q9Y5H2 RNU6-219P-201ENST00000364728 107 ntBASIC2.43□□□□□ -2.02
PCDHGA11Q9Y5H2 Y_RNA.426-201ENST00000384068 113 ntBASIC2.43□□□□□ -2.02
PCDHGA11Q9Y5H2 MIR588-201ENST00000384900 83 ntBASIC2.43□□□□□ -2.02
PCDHGA11Q9Y5H2 MIR27B-201ENST00000385129 97 ntBASIC2.43□□□□□ -2.02
PCDHGA11Q9Y5H2 AC244023.1-201ENST00000426884 112 ntBASIC2.43□□□□□ -2.02
PCDHGA11Q9Y5H2 AC015688.6-201ENST00000577737 104 ntBASIC2.43□□□□□ -2.02
PCDHGA11Q9Y5H2 MIR5588-201ENST00000581890 63 ntBASIC2.43□□□□□ -2.02
PCDHGA11Q9Y5H2 MIR4713-201ENST00000582691 75 ntBASIC2.43□□□□□ -2.02
PCDHGA11Q9Y5H2 AC242498.1-201ENST00000604134 111 ntBASIC2.43□□□□□ -2.02
PCDHGA11Q9Y5H2 SEPT14P17-201ENST00000617978 177 ntBASIC2.43□□□□□ -2.02
PCDHGA11Q9Y5H2 AC006386.2-201ENST00000624491 75 ntBASIC2.43□□□□□ -2.02
PCDHGA11Q9Y5H2 AC012005.1-201ENST00000624575 75 ntBASIC2.43□□□□□ -2.02
PCDHGA11Q9Y5H2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
PCDHGA11Q9Y5H2 Y_RNA.173-201ENST00000363776 113 ntBASIC2.42□□□□□ -2.02
PCDHGA11Q9Y5H2 SNORA80A-201ENST00000363922 136 ntBASIC2.42□□□□□ -2.02
PCDHGA11Q9Y5H2 RNY1P2-201ENST00000364820 117 ntBASIC2.42□□□□□ -2.02
PCDHGA11Q9Y5H2 RNU6-267P-201ENST00000516714 103 ntBASIC2.42□□□□□ -2.02
PCDHGA11Q9Y5H2 EIF4BP1-201ENST00000554881 351 ntBASIC2.42□□□□□ -2.02
PCDHGA11Q9Y5H2 SNORA77B-201ENST00000578179 125 ntBASIC2.42□□□□□ -2.02
PCDHGA11Q9Y5H2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PCDHGA11Q9Y5H2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PCDHGA11Q9Y5H2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
PCDHGA11Q9Y5H2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
PCDHGA11Q9Y5H2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHGA11Q9Y5H2 RNU6-979P-201ENST00000383896 107 ntBASIC2.41□□□□□ -2.02
PCDHGA11Q9Y5H2 RNA5SP184-201ENST00000411071 108 ntBASIC2.41□□□□□ -2.02
PCDHGA11Q9Y5H2 RNA5SP445-201ENST00000515889 115 ntBASIC2.41□□□□□ -2.02
PCDHGA11Q9Y5H2 MIR2115-201ENST00000516657 100 ntBASIC2.41□□□□□ -2.02
PCDHGA11Q9Y5H2 MIR4264-201ENST00000583520 66 ntBASIC2.41□□□□□ -2.02
PCDHGA11Q9Y5H2 AL033523.1-201ENST00000605153 153 ntBASIC2.41□□□□□ -2.02
PCDHGA11Q9Y5H2 AL096861.1-201ENST00000610899 123 ntBASIC2.41□□□□□ -2.02
PCDHGA11Q9Y5H2 U4.3-201ENST00000621047 82 ntBASIC2.41□□□□□ -2.02
PCDHGA11Q9Y5H2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.4□□□□□ -2.03
PCDHGA11Q9Y5H2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PCDHGA11Q9Y5H2 MIR196B-201ENST00000384852 84 ntBASIC2.4□□□□□ -2.03
PCDHGA11Q9Y5H2 Y_RNA.609-201ENST00000410669 89 ntBASIC2.4□□□□□ -2.03
PCDHGA11Q9Y5H2 RNA5SP356-201ENST00000515972 94 ntBASIC2.4□□□□□ -2.03
PCDHGA11Q9Y5H2 RNU6-947P-201ENST00000516264 106 ntBASIC2.4□□□□□ -2.03
PCDHGA11Q9Y5H2 RNU6-250P-201ENST00000516958 103 ntBASIC2.4□□□□□ -2.03
PCDHGA11Q9Y5H2 MIR6895-201ENST00000613497 78 ntBASIC2.4□□□□□ -2.03
PCDHGA11Q9Y5H2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
PCDHGA11Q9Y5H2 AC062016.1-201ENST00000355719 319 ntBASIC2.39□□□□□ -2.03
PCDHGA11Q9Y5H2 RNU6-228P-201ENST00000362700 106 ntBASIC2.39□□□□□ -2.03
PCDHGA11Q9Y5H2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.39□□□□□ -2.03
PCDHGA11Q9Y5H2 RNU7-171P-201ENST00000459581 62 ntBASIC2.39□□□□□ -2.03
PCDHGA11Q9Y5H2 AL133373.1-201ENST00000497098 94 ntBASIC2.39□□□□□ -2.03
PCDHGA11Q9Y5H2 MIR4319-201ENST00000577285 85 ntBASIC2.39□□□□□ -2.03
PCDHGA11Q9Y5H2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.39□□□□□ -2.03
PCDHGA11Q9Y5H2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCDHGA11Q9Y5H2 HSBP1P2-201ENST00000299671 229 ntBASIC2.38□□□□□ -2.03
PCDHGA11Q9Y5H2 MT-TN-201ENST00000387400 73 ntBASIC2.38□□□□□ -2.03
PCDHGA11Q9Y5H2 RNU11-2P-201ENST00000516898 142 ntBASIC2.38□□□□□ -2.03
PCDHGA11Q9Y5H2 SNORA4-201ENST00000584302 138 ntBASIC2.38□□□□□ -2.03
PCDHGA11Q9Y5H2 AP000942.3-201ENST00000603702 160 ntBASIC2.38□□□□□ -2.03
PCDHGA11Q9Y5H2 NDUFB4P4-201ENST00000404822 243 ntBASIC2.37□□□□□ -2.03
PCDHGA11Q9Y5H2 Y_RNA.611-201ENST00000410682 108 ntBASIC2.37□□□□□ -2.03
PCDHGA11Q9Y5H2 AL161932.1-201ENST00000437408 146 ntBASIC2.37□□□□□ -2.03
PCDHGA11Q9Y5H2 RN7SL274P-201ENST00000492268 272 ntBASIC2.37□□□□□ -2.03
PCDHGA11Q9Y5H2 RNA5SP320-201ENST00000516263 124 ntBASIC2.37□□□□□ -2.03
PCDHGA11Q9Y5H2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHGA11Q9Y5H2 RNU6-633P-201ENST00000362612 103 ntBASIC2.36□□□□□ -2.03
PCDHGA11Q9Y5H2 SNORA25.3-201ENST00000363205 127 ntBASIC2.36□□□□□ -2.03
PCDHGA11Q9Y5H2 Y_RNA.168-201ENST00000363740 102 ntBASIC2.36□□□□□ -2.03
PCDHGA11Q9Y5H2 SNORA16B-201ENST00000364674 135 ntBASIC2.36□□□□□ -2.03
PCDHGA11Q9Y5H2 MIR181B2-201ENST00000385004 89 ntBASIC2.36□□□□□ -2.03
PCDHGA11Q9Y5H2 MIR563-201ENST00000385080 79 ntBASIC2.36□□□□□ -2.03
PCDHGA11Q9Y5H2 MIR1255A-201ENST00000408338 113 ntBASIC2.36□□□□□ -2.03
PCDHGA11Q9Y5H2 snoU13.9-201ENST00000458927 103 ntBASIC2.36□□□□□ -2.03
PCDHGA11Q9Y5H2 SNORA44.1-201ENST00000517031 108 ntBASIC2.36□□□□□ -2.03
PCDHGA11Q9Y5H2 MIR8063-201ENST00000621930 81 ntBASIC2.36□□□□□ -2.03
PCDHGA11Q9Y5H2 SNORD33-201ENST00000362761 85 ntBASIC2.35□□□□□ -2.03
PCDHGA11Q9Y5H2 RNU6-509P-201ENST00000363519 107 ntBASIC2.35□□□□□ -2.03
PCDHGA11Q9Y5H2 SNORA5B-201ENST00000363786 132 ntBASIC2.35□□□□□ -2.03
PCDHGA11Q9Y5H2 AL359511.1-201ENST00000402970 211 ntBASIC2.35□□□□□ -2.03
PCDHGA11Q9Y5H2 MIR1302-7-201ENST00000408841 72 ntBASIC2.35□□□□□ -2.03
PCDHGA11Q9Y5H2 AC079804.2-201ENST00000490376 200 ntBASIC2.35□□□□□ -2.03
PCDHGA11Q9Y5H2 AL513043.2-201ENST00000573941 143 ntBASIC2.35□□□□□ -2.03
PCDHGA11Q9Y5H2 RNA5SP68-201ENST00000363885 119 ntBASIC2.34□□□□□ -2.03
PCDHGA11Q9Y5H2 SNORD114-30-201ENST00000364448 72 ntBASIC2.34□□□□□ -2.03
PCDHGA11Q9Y5H2 Y_RNA.437-201ENST00000384113 113 ntBASIC2.34□□□□□ -2.03
PCDHGA11Q9Y5H2 SNORA2B-201ENST00000384583 137 ntBASIC2.34□□□□□ -2.03
PCDHGA11Q9Y5H2 RNU6-1165P-201ENST00000410119 107 ntBASIC2.34□□□□□ -2.03
PCDHGA11Q9Y5H2 RPS27P21-201ENST00000486977 252 ntBASIC2.34□□□□□ -2.03
PCDHGA11Q9Y5H2 MIR4299-201ENST00000577899 72 ntBASIC2.34□□□□□ -2.03
PCDHGA11Q9Y5H2 MIR4666B-201ENST00000578142 81 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms