Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL512310.8-201ENST00000550183 120 ntBASIC1.64□□□□□ -2.15
PCDHB1Q9Y5F3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
PCDHB1Q9Y5F3 Y_RNA.171-201ENST00000363760 102 ntBASIC1.63□□□□□ -2.15
PCDHB1Q9Y5F3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
PCDHB1Q9Y5F3 RNA5SP261-201ENST00000410536 106 ntBASIC1.63□□□□□ -2.15
PCDHB1Q9Y5F3 RNA5SP144-201ENST00000410846 116 ntBASIC1.63□□□□□ -2.15
PCDHB1Q9Y5F3 HMGN1P33-201ENST00000432945 451 ntBASIC1.63□□□□□ -2.15
PCDHB1Q9Y5F3 AL133373.1-201ENST00000497098 94 ntBASIC1.63□□□□□ -2.15
PCDHB1Q9Y5F3 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
PCDHB1Q9Y5F3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.63□□□□□ -2.15
PCDHB1Q9Y5F3 AC021613.1-201ENST00000623880 111 ntBASIC1.63□□□□□ -2.15
PCDHB1Q9Y5F3 MIR4251-201ENST00000635819 61 ntBASIC1.63□□□□□ -2.15
PCDHB1Q9Y5F3 SNORA63.5-201ENST00000363548 123 ntBASIC1.62□□□□□ -2.15
PCDHB1Q9Y5F3 Y_RNA.198-201ENST00000364013 98 ntBASIC1.62□□□□□ -2.15
PCDHB1Q9Y5F3 SNORD12C-201ENST00000386307 89 ntBASIC1.62□□□□□ -2.15
PCDHB1Q9Y5F3 POLR2J4-204ENST00000418424 324 ntBASIC1.62□□□□□ -2.15
PCDHB1Q9Y5F3 RNU7-41P-201ENST00000515917 61 ntBASIC1.62□□□□□ -2.15
PCDHB1Q9Y5F3 MIR3613-201ENST00000579844 87 ntBASIC1.62□□□□□ -2.15
PCDHB1Q9Y5F3 AL645939.4-201ENST00000604495 135 ntBASIC1.62□□□□□ -2.15
PCDHB1Q9Y5F3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.61□□□□□ -2.15
PCDHB1Q9Y5F3 Y_RNA.344-201ENST00000365381 112 ntBASIC1.61□□□□□ -2.15
PCDHB1Q9Y5F3 Y_RNA.362-201ENST00000365518 110 ntBASIC1.61□□□□□ -2.15
PCDHB1Q9Y5F3 SNORA26.6-201ENST00000391256 115 ntBASIC1.61□□□□□ -2.15
PCDHB1Q9Y5F3 RPS27P16-201ENST00000425758 201 ntBASIC1.61□□□□□ -2.15
PCDHB1Q9Y5F3 AL096861.1-201ENST00000610899 123 ntBASIC1.61□□□□□ -2.15
PCDHB1Q9Y5F3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.6□□□□□ -2.15
PCDHB1Q9Y5F3 MIR489-201ENST00000384923 84 ntBASIC1.6□□□□□ -2.15
PCDHB1Q9Y5F3 RNU6-554P-201ENST00000410466 106 ntBASIC1.6□□□□□ -2.15
PCDHB1Q9Y5F3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.6□□□□□ -2.15
PCDHB1Q9Y5F3 RN7SKP88-201ENST00000516847 250 ntBASIC1.6□□□□□ -2.15
PCDHB1Q9Y5F3 MIR3152-201ENST00000579801 74 ntBASIC1.6□□□□□ -2.15
PCDHB1Q9Y5F3 MIR3192-201ENST00000584920 77 ntBASIC1.6□□□□□ -2.15
PCDHB1Q9Y5F3 7SK.8-201ENST00000612110 250 ntBASIC1.6□□□□□ -2.15
PCDHB1Q9Y5F3 7SK.11-201ENST00000615477 250 ntBASIC1.6□□□□□ -2.15
PCDHB1Q9Y5F3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.6□□□□□ -2.15
PCDHB1Q9Y5F3 7SK.13-201ENST00000622040 250 ntBASIC1.6□□□□□ -2.15
PCDHB1Q9Y5F3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.59□□□□□ -2.15
PCDHB1Q9Y5F3 Y_RNA.85-201ENST00000363014 111 ntBASIC1.59□□□□□ -2.15
PCDHB1Q9Y5F3 RNU1-42P-201ENST00000364033 160 ntBASIC1.59□□□□□ -2.15
PCDHB1Q9Y5F3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.59□□□□□ -2.15
PCDHB1Q9Y5F3 Y_RNA.281-201ENST00000364774 94 ntBASIC1.59□□□□□ -2.15
PCDHB1Q9Y5F3 RNU6-1107P-201ENST00000364817 104 ntBASIC1.59□□□□□ -2.15
PCDHB1Q9Y5F3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.59□□□□□ -2.15
PCDHB1Q9Y5F3 Y_RNA.470-201ENST00000384307 117 ntBASIC1.59□□□□□ -2.15
PCDHB1Q9Y5F3 RNU6-106P-201ENST00000384405 107 ntBASIC1.59□□□□□ -2.15
PCDHB1Q9Y5F3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.59□□□□□ -2.15
PCDHB1Q9Y5F3 AC004812.1-201ENST00000540773 146 ntBASIC1.59□□□□□ -2.15
PCDHB1Q9Y5F3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.59□□□□□ -2.15
PCDHB1Q9Y5F3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PCDHB1Q9Y5F3 Y_RNA.213-201ENST00000364178 111 ntBASIC1.58□□□□□ -2.16
PCDHB1Q9Y5F3 MIR518E-201ENST00000385252 88 ntBASIC1.58□□□□□ -2.16
PCDHB1Q9Y5F3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.58□□□□□ -2.16
PCDHB1Q9Y5F3 RNU6-893P-201ENST00000458841 100 ntBASIC1.58□□□□□ -2.16
PCDHB1Q9Y5F3 MIR1270-201ENST00000459320 83 ntBASIC1.58□□□□□ -2.16
PCDHB1Q9Y5F3 RNU7-6P-201ENST00000516845 62 ntBASIC1.58□□□□□ -2.16
PCDHB1Q9Y5F3 SNORD53B-201ENST00000577887 78 ntBASIC1.58□□□□□ -2.16
PCDHB1Q9Y5F3 AL020996.3-201ENST00000606617 222 ntBASIC1.58□□□□□ -2.16
PCDHB1Q9Y5F3 MIR6841-201ENST00000637129 72 ntBASIC1.58□□□□□ -2.16
PCDHB1Q9Y5F3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
PCDHB1Q9Y5F3 AC090844.1-201ENST00000422019 156 ntBASIC1.57□□□□□ -2.16
PCDHB1Q9Y5F3 AC009474.2-201ENST00000451383 136 ntBASIC1.57□□□□□ -2.16
PCDHB1Q9Y5F3 RNU6-970P-201ENST00000516312 107 ntBASIC1.57□□□□□ -2.16
PCDHB1Q9Y5F3 RNU6-165P-201ENST00000517170 99 ntBASIC1.57□□□□□ -2.16
PCDHB1Q9Y5F3 MIR6717-201ENST00000622747 73 ntBASIC1.57□□□□□ -2.16
PCDHB1Q9Y5F3 RNU6-1298P-201ENST00000362456 101 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 SNORA22.1-201ENST00000362701 134 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 RNU6-60P-201ENST00000364792 103 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 Y_RNA.531-201ENST00000384589 121 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 MIR548D2-201ENST00000384955 97 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 RNU6-1319P-201ENST00000390855 104 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 RNU6-747P-201ENST00000390928 104 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 RNU6-241P-201ENST00000391148 104 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 RNA5SP89-201ENST00000410300 108 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 SNORA19.1-201ENST00000410656 129 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 RNU6-177P-201ENST00000411257 104 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 AL022718.1-201ENST00000412004 84 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 RPL39P34-201ENST00000477141 156 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 RNU11-2P-201ENST00000516898 142 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 MIR548AO-201ENST00000579992 96 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 Y_RNA.773-201ENST00000607168 90 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 MIR8055-201ENST00000610739 97 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 AC087741.2-201ENST00000619415 172 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 MIR8065-201ENST00000620577 100 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 MIR1255B1-201ENST00000636325 63 ntBASIC1.56□□□□□ -2.16
PCDHB1Q9Y5F3 RNU6-392P-201ENST00000364926 101 ntBASIC1.55□□□□□ -2.16
PCDHB1Q9Y5F3 U8.6-201ENST00000364939 135 ntBASIC1.55□□□□□ -2.16
PCDHB1Q9Y5F3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.55□□□□□ -2.16
PCDHB1Q9Y5F3 RNU7-113P-201ENST00000459273 62 ntBASIC1.55□□□□□ -2.16
PCDHB1Q9Y5F3 RPS23P4-201ENST00000487908 423 ntBASIC1.55□□□□□ -2.16
PCDHB1Q9Y5F3 CYP3A52P-201ENST00000563326 91 ntBASIC1.55□□□□□ -2.16
PCDHB1Q9Y5F3 MIR548AE2-201ENST00000583456 67 ntBASIC1.55□□□□□ -2.16
PCDHB1Q9Y5F3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
PCDHB1Q9Y5F3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PCDHB1Q9Y5F3 RNY4P6-201ENST00000363667 96 ntBASIC1.54□□□□□ -2.16
PCDHB1Q9Y5F3 Y_RNA.163-201ENST00000363702 113 ntBASIC1.54□□□□□ -2.16
PCDHB1Q9Y5F3 SNORA1.1-201ENST00000364671 133 ntBASIC1.54□□□□□ -2.16
PCDHB1Q9Y5F3 Y_RNA.354-201ENST00000365448 111 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms