Protein–RNA interactions for Protein: Q9Y228

TRAF3IP3, TRAF3-interacting JNK-activating modulator, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3Q9Y228 AL596211.1-201ENST00000569873 2277 ntBASIC0.15□□□□□ -2.39
TRAF3IP3Q9Y228 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
TRAF3IP3Q9Y228 Y_RNA.32-201ENST00000362589 110 ntBASIC0.14□□□□□ -2.39
TRAF3IP3Q9Y228 RNA5SP62-201ENST00000363457 110 ntBASIC0.14□□□□□ -2.39
TRAF3IP3Q9Y228 RNU6-728P-201ENST00000365375 104 ntBASIC0.14□□□□□ -2.39
TRAF3IP3Q9Y228 RNU4-17P-201ENST00000365598 141 ntBASIC0.14□□□□□ -2.39
TRAF3IP3Q9Y228 RNU6-949P-201ENST00000384040 107 ntBASIC0.14□□□□□ -2.39
TRAF3IP3Q9Y228 Y_RNA.454-201ENST00000384224 113 ntBASIC0.14□□□□□ -2.39
TRAF3IP3Q9Y228 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
TRAF3IP3Q9Y228 RNU6-635P-201ENST00000516651 102 ntBASIC0.14□□□□□ -2.39
TRAF3IP3Q9Y228 RNU6-1258P-201ENST00000516911 111 ntBASIC0.14□□□□□ -2.39
TRAF3IP3Q9Y228 RNU6-765P-201ENST00000516916 99 ntBASIC0.14□□□□□ -2.39
TRAF3IP3Q9Y228 SNORA22.1-201ENST00000362701 134 ntBASIC0.13□□□□□ -2.39
TRAF3IP3Q9Y228 AL512326.2-201ENST00000426359 151 ntBASIC0.13□□□□□ -2.39
TRAF3IP3Q9Y228 SNORA31.14-201ENST00000516728 116 ntBASIC0.13□□□□□ -2.39
TRAF3IP3Q9Y228 AC069113.3-201ENST00000521019 150 ntBASIC0.13□□□□□ -2.39
TRAF3IP3Q9Y228 MIR3152-201ENST00000579801 74 ntBASIC0.13□□□□□ -2.39
TRAF3IP3Q9Y228 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.13□□□□□ -2.39
TRAF3IP3Q9Y228 SNORD114-23-201ENST00000363536 72 ntBASIC0.12□□□□□ -2.39
TRAF3IP3Q9Y228 RNU6-103P-201ENST00000363686 107 ntBASIC0.12□□□□□ -2.39
TRAF3IP3Q9Y228 RNY1P13-201ENST00000365030 105 ntBASIC0.12□□□□□ -2.39
TRAF3IP3Q9Y228 RNU6-713P-201ENST00000384761 107 ntBASIC0.12□□□□□ -2.39
TRAF3IP3Q9Y228 MIR598-201ENST00000384868 97 ntBASIC0.12□□□□□ -2.39
TRAF3IP3Q9Y228 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
TRAF3IP3Q9Y228 RNA5SP237-201ENST00000410414 113 ntBASIC0.12□□□□□ -2.39
TRAF3IP3Q9Y228 SEPT7P4-201ENST00000437076 306 ntBASIC0.12□□□□□ -2.39
TRAF3IP3Q9Y228 Y_RNA.679-201ENST00000516416 91 ntBASIC0.12□□□□□ -2.39
TRAF3IP3Q9Y228 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.12□□□□□ -2.39
TRAF3IP3Q9Y228 AC044792.1-201ENST00000593294 196 ntBASIC0.12□□□□□ -2.39
TRAF3IP3Q9Y228 MIR6755-201ENST00000619993 66 ntBASIC0.12□□□□□ -2.39
TRAF3IP3Q9Y228 MIR924-201ENST00000638017 53 ntBASIC0.12□□□□□ -2.39
TRAF3IP3Q9Y228 Y_RNA.262-201ENST00000364641 102 ntBASIC0.11□□□□□ -2.39
TRAF3IP3Q9Y228 Y_RNA.352-201ENST00000365439 102 ntBASIC0.11□□□□□ -2.39
TRAF3IP3Q9Y228 Y_RNA.461-201ENST00000384263 103 ntBASIC0.11□□□□□ -2.39
TRAF3IP3Q9Y228 Y_RNA.574-201ENST00000384766 95 ntBASIC0.11□□□□□ -2.39
TRAF3IP3Q9Y228 RNU2-59P-201ENST00000410482 191 ntBASIC0.11□□□□□ -2.39
TRAF3IP3Q9Y228 RNA5SP268-201ENST00000516828 124 ntBASIC0.11□□□□□ -2.39
TRAF3IP3Q9Y228 MIR378D2-201ENST00000580636 98 ntBASIC0.11□□□□□ -2.39
TRAF3IP3Q9Y228 MIR4744-201ENST00000581563 82 ntBASIC0.11□□□□□ -2.39
TRAF3IP3Q9Y228 MIR7107-201ENST00000611489 80 ntBASIC0.11□□□□□ -2.39
TRAF3IP3Q9Y228 RNU6-403P-201ENST00000363163 104 ntBASIC0.1□□□□□ -2.39
TRAF3IP3Q9Y228 RNU6-238P-201ENST00000363313 106 ntBASIC0.1□□□□□ -2.39
TRAF3IP3Q9Y228 Y_RNA.292-201ENST00000364904 97 ntBASIC0.1□□□□□ -2.39
TRAF3IP3Q9Y228 Y_RNA.355-201ENST00000365462 98 ntBASIC0.1□□□□□ -2.39
TRAF3IP3Q9Y228 Y_RNA.396-201ENST00000383949 103 ntBASIC0.1□□□□□ -2.39
TRAF3IP3Q9Y228 RNU6-291P-201ENST00000384720 107 ntBASIC0.1□□□□□ -2.39
TRAF3IP3Q9Y228 MIR624-201ENST00000385217 97 ntBASIC0.1□□□□□ -2.39
TRAF3IP3Q9Y228 MIR1302-6-201ENST00000408466 90 ntBASIC0.1□□□□□ -2.39
TRAF3IP3Q9Y228 RNY3P16-201ENST00000516338 101 ntBASIC0.1□□□□□ -2.39
TRAF3IP3Q9Y228 Y_RNA.720-201ENST00000517166 92 ntBASIC0.1□□□□□ -2.39
TRAF3IP3Q9Y228 RNA5SP47-201ENST00000517230 109 ntBASIC0.1□□□□□ -2.39
TRAF3IP3Q9Y228 Y_RNA.757-201ENST00000578934 114 ntBASIC0.1□□□□□ -2.39
TRAF3IP3Q9Y228 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.1□□□□□ -2.39
TRAF3IP3Q9Y228 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
TRAF3IP3Q9Y228 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
TRAF3IP3Q9Y228 Y_RNA.277-201ENST00000364754 102 ntBASIC0.09□□□□□ -2.4
TRAF3IP3Q9Y228 RNY4P28-201ENST00000365281 93 ntBASIC0.09□□□□□ -2.4
TRAF3IP3Q9Y228 SNORA18-201ENST00000384416 132 ntBASIC0.09□□□□□ -2.4
TRAF3IP3Q9Y228 Y_RNA.536-201ENST00000384621 113 ntBASIC0.09□□□□□ -2.4
TRAF3IP3Q9Y228 RNU6-578P-201ENST00000390980 103 ntBASIC0.09□□□□□ -2.4
TRAF3IP3Q9Y228 AC069271.1-201ENST00000445577 156 ntBASIC0.09□□□□□ -2.4
TRAF3IP3Q9Y228 SNORD116-25-201ENST00000516517 92 ntBASIC0.09□□□□□ -2.4
TRAF3IP3Q9Y228 SNORA25.16-201ENST00000516741 121 ntBASIC0.09□□□□□ -2.4
TRAF3IP3Q9Y228 AC112693.2-201ENST00000556538 232 ntBASIC0.09□□□□□ -2.4
TRAF3IP3Q9Y228 MTND5P34-201ENST00000568888 325 ntBASIC0.09□□□□□ -2.4
TRAF3IP3Q9Y228 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.09□□□□□ -2.4
TRAF3IP3Q9Y228 Y_RNA.174-201ENST00000363781 105 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 RNY1-201ENST00000364228 113 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 Y_RNA.326-201ENST00000365176 113 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 RNU6-1160P-201ENST00000384546 104 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 Y_RNA.539-201ENST00000384635 107 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 SNORD28-201ENST00000384706 75 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 SNORA79-201ENST00000408376 140 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 RNU6-1086P-201ENST00000410930 100 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 RNA5SP127-201ENST00000411051 133 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 AC073261.1-201ENST00000429409 121 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 AL121914.1-201ENST00000450188 156 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 snoU13.18-201ENST00000459483 104 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 RNU6-1149P-201ENST00000516810 97 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 SCARNA16.5-201ENST00000517114 183 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 AP003072.1-201ENST00000531740 145 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 PVT1_3.1-201ENST00000620853 95 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 MTND5P32-201ENST00000560711 1802 ntBASIC0.08□□□□□ -2.4
TRAF3IP3Q9Y228 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
TRAF3IP3Q9Y228 Y_RNA.422-201ENST00000384054 114 ntBASIC0.07□□□□□ -2.4
TRAF3IP3Q9Y228 SNORA20-201ENST00000384662 132 ntBASIC0.07□□□□□ -2.4
TRAF3IP3Q9Y228 SNORD58.1-201ENST00000391313 66 ntBASIC0.07□□□□□ -2.4
TRAF3IP3Q9Y228 RNU5E-9P-201ENST00000411164 104 ntBASIC0.07□□□□□ -2.4
TRAF3IP3Q9Y228 MRPS18CP4-201ENST00000535821 231 ntBASIC0.07□□□□□ -2.4
TRAF3IP3Q9Y228 AC010487.4-201ENST00000637027 61 ntBASIC0.07□□□□□ -2.4
TRAF3IP3Q9Y228 Y_RNA.171-201ENST00000363760 102 ntBASIC0.06□□□□□ -2.4
TRAF3IP3Q9Y228 RNU4-16P-201ENST00000364737 141 ntBASIC0.06□□□□□ -2.4
TRAF3IP3Q9Y228 Y_RNA.562-201ENST00000384695 113 ntBASIC0.06□□□□□ -2.4
TRAF3IP3Q9Y228 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
TRAF3IP3Q9Y228 SUMO1P3-201ENST00000439961 304 ntBASIC0.06□□□□□ -2.4
TRAF3IP3Q9Y228 SNORD127-201ENST00000458892 86 ntBASIC0.06□□□□□ -2.4
TRAF3IP3Q9Y228 RNU6-469P-201ENST00000516253 101 ntBASIC0.06□□□□□ -2.4
TRAF3IP3Q9Y228 RNU7-35P-201ENST00000517174 62 ntBASIC0.06□□□□□ -2.4
TRAF3IP3Q9Y228 AL117187.1-201ENST00000555482 181 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 214.1 ms