Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MIR4422-201ENST00000581938 83 ntBASIC1.82□□□□□ -2.12
PPARGC1AQ9UBK2 MIR548AE2-201ENST00000583456 67 ntBASIC1.82□□□□□ -2.12
PPARGC1AQ9UBK2 MIR3192-201ENST00000584920 77 ntBASIC1.82□□□□□ -2.12
PPARGC1AQ9UBK2 AC084768.2-201ENST00000622736 221 ntBASIC1.82□□□□□ -2.12
PPARGC1AQ9UBK2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
PPARGC1AQ9UBK2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.81□□□□□ -2.12
PPARGC1AQ9UBK2 U8.6-201ENST00000364939 135 ntBASIC1.81□□□□□ -2.12
PPARGC1AQ9UBK2 RNU6-147P-201ENST00000383983 107 ntBASIC1.81□□□□□ -2.12
PPARGC1AQ9UBK2 Y_RNA.507-201ENST00000384500 99 ntBASIC1.81□□□□□ -2.12
PPARGC1AQ9UBK2 AC245517.4-201ENST00000448601 281 ntBASIC1.81□□□□□ -2.12
PPARGC1AQ9UBK2 snoU13.23-201ENST00000458863 104 ntBASIC1.81□□□□□ -2.12
PPARGC1AQ9UBK2 AL133373.1-201ENST00000497098 94 ntBASIC1.81□□□□□ -2.12
PPARGC1AQ9UBK2 AC108210.2-201ENST00000503681 201 ntBASIC1.81□□□□□ -2.12
PPARGC1AQ9UBK2 RNU11-2P-201ENST00000516898 142 ntBASIC1.81□□□□□ -2.12
PPARGC1AQ9UBK2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PPARGC1AQ9UBK2 RNA5SP432-201ENST00000362480 116 ntBASIC1.8□□□□□ -2.12
PPARGC1AQ9UBK2 RNU6-1113P-201ENST00000384348 107 ntBASIC1.8□□□□□ -2.12
PPARGC1AQ9UBK2 RNU6-970P-201ENST00000516312 107 ntBASIC1.8□□□□□ -2.12
PPARGC1AQ9UBK2 MIR3613-201ENST00000579844 87 ntBASIC1.8□□□□□ -2.12
PPARGC1AQ9UBK2 MIR3618-201ENST00000580330 88 ntBASIC1.8□□□□□ -2.12
PPARGC1AQ9UBK2 uc_338.28-201ENST00000612082 187 ntBASIC1.8□□□□□ -2.12
PPARGC1AQ9UBK2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.79□□□□□ -2.12
PPARGC1AQ9UBK2 MT-TN-201ENST00000387400 73 ntBASIC1.79□□□□□ -2.12
PPARGC1AQ9UBK2 RNU1-78P-201ENST00000391248 165 ntBASIC1.79□□□□□ -2.12
PPARGC1AQ9UBK2 RNU6-554P-201ENST00000410466 106 ntBASIC1.79□□□□□ -2.12
PPARGC1AQ9UBK2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.79□□□□□ -2.12
PPARGC1AQ9UBK2 RNU7-35P-201ENST00000517174 62 ntBASIC1.79□□□□□ -2.12
PPARGC1AQ9UBK2 AP003716.2-201ENST00000528260 108 ntBASIC1.79□□□□□ -2.12
PPARGC1AQ9UBK2 MIR3937-201ENST00000580135 106 ntBASIC1.79□□□□□ -2.12
PPARGC1AQ9UBK2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PPARGC1AQ9UBK2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.79□□□□□ -2.12
PPARGC1AQ9UBK2 RNU6-766P-201ENST00000362478 107 ntBASIC1.78□□□□□ -2.12
PPARGC1AQ9UBK2 RNU6-363P-201ENST00000362895 105 ntBASIC1.78□□□□□ -2.12
PPARGC1AQ9UBK2 Y_RNA.78-201ENST00000362970 110 ntBASIC1.78□□□□□ -2.12
PPARGC1AQ9UBK2 RNU6-396P-201ENST00000365369 105 ntBASIC1.78□□□□□ -2.12
PPARGC1AQ9UBK2 RNU6-1086P-201ENST00000410930 100 ntBASIC1.78□□□□□ -2.12
PPARGC1AQ9UBK2 MIR3664-201ENST00000579074 99 ntBASIC1.78□□□□□ -2.12
PPARGC1AQ9UBK2 MIR4769-201ENST00000584126 77 ntBASIC1.78□□□□□ -2.12
PPARGC1AQ9UBK2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PPARGC1AQ9UBK2 SNORD48-201ENST00000364953 64 ntBASIC1.77□□□□□ -2.13
PPARGC1AQ9UBK2 RNA5SP363-201ENST00000365072 115 ntBASIC1.77□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-32P-201ENST00000383948 107 ntBASIC1.77□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-13P-201ENST00000384248 107 ntBASIC1.77□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-12P-201ENST00000384604 107 ntBASIC1.77□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-41P-201ENST00000384741 107 ntBASIC1.77□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-816P-201ENST00000390914 107 ntBASIC1.77□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-1268P-201ENST00000391214 107 ntBASIC1.77□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-1239P-201ENST00000391310 107 ntBASIC1.77□□□□□ -2.13
PPARGC1AQ9UBK2 RPL39P25-201ENST00000449384 154 ntBASIC1.77□□□□□ -2.13
PPARGC1AQ9UBK2 RNA5SP445-201ENST00000515889 115 ntBASIC1.77□□□□□ -2.13
PPARGC1AQ9UBK2 AP000942.3-201ENST00000603702 160 ntBASIC1.77□□□□□ -2.13
PPARGC1AQ9UBK2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.77□□□□□ -2.13
PPARGC1AQ9UBK2 Y_RNA.328-201ENST00000365208 113 ntBASIC1.76□□□□□ -2.13
PPARGC1AQ9UBK2 SNORA18-201ENST00000384416 132 ntBASIC1.76□□□□□ -2.13
PPARGC1AQ9UBK2 MIR1302-7-201ENST00000408841 72 ntBASIC1.76□□□□□ -2.13
PPARGC1AQ9UBK2 AC090844.1-201ENST00000422019 156 ntBASIC1.76□□□□□ -2.13
PPARGC1AQ9UBK2 MIR2115-201ENST00000516657 100 ntBASIC1.76□□□□□ -2.13
PPARGC1AQ9UBK2 AC019176.1-201ENST00000518519 225 ntBASIC1.76□□□□□ -2.13
PPARGC1AQ9UBK2 AL512310.8-201ENST00000550183 120 ntBASIC1.76□□□□□ -2.13
PPARGC1AQ9UBK2 MIR4264-201ENST00000583520 66 ntBASIC1.76□□□□□ -2.13
PPARGC1AQ9UBK2 FAM71BP1-201ENST00000604431 523 ntBASIC1.76□□□□□ -2.13
PPARGC1AQ9UBK2 PRELID3BP2-201ENST00000605362 201 ntBASIC1.76□□□□□ -2.13
PPARGC1AQ9UBK2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
PPARGC1AQ9UBK2 RNU4-67P-201ENST00000364569 141 ntBASIC1.75□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-482P-201ENST00000391068 107 ntBASIC1.75□□□□□ -2.13
PPARGC1AQ9UBK2 AL591806.2-201ENST00000433122 173 ntBASIC1.75□□□□□ -2.13
PPARGC1AQ9UBK2 MIR1270-201ENST00000459320 83 ntBASIC1.75□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-1018P-201ENST00000516577 106 ntBASIC1.75□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-548P-201ENST00000517083 115 ntBASIC1.75□□□□□ -2.13
PPARGC1AQ9UBK2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
PPARGC1AQ9UBK2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.74□□□□□ -2.13
PPARGC1AQ9UBK2 MIR377-201ENST00000362145 69 ntBASIC1.74□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-756P-201ENST00000383997 107 ntBASIC1.74□□□□□ -2.13
PPARGC1AQ9UBK2 SNORA51.5-201ENST00000384126 131 ntBASIC1.74□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-342P-201ENST00000384521 104 ntBASIC1.74□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.74□□□□□ -2.13
PPARGC1AQ9UBK2 snoU13.25-201ENST00000458945 104 ntBASIC1.74□□□□□ -2.13
PPARGC1AQ9UBK2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.74□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-947P-201ENST00000516264 106 ntBASIC1.74□□□□□ -2.13
PPARGC1AQ9UBK2 AP000753.3-201ENST00000604083 169 ntBASIC1.74□□□□□ -2.13
PPARGC1AQ9UBK2 MIR502-201ENST00000606349 86 ntBASIC1.74□□□□□ -2.13
PPARGC1AQ9UBK2 Y_RNA.773-201ENST00000607168 90 ntBASIC1.74□□□□□ -2.13
PPARGC1AQ9UBK2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PPARGC1AQ9UBK2 RNA5SP264-201ENST00000363115 107 ntBASIC1.73□□□□□ -2.13
PPARGC1AQ9UBK2 SNORA32-201ENST00000384072 121 ntBASIC1.73□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-409P-201ENST00000384114 104 ntBASIC1.73□□□□□ -2.13
PPARGC1AQ9UBK2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-613P-201ENST00000410412 108 ntBASIC1.73□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-733P-201ENST00000410759 104 ntBASIC1.73□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-1054P-201ENST00000411293 104 ntBASIC1.73□□□□□ -2.13
PPARGC1AQ9UBK2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.73□□□□□ -2.13
PPARGC1AQ9UBK2 SNORA25.15-201ENST00000516487 89 ntBASIC1.73□□□□□ -2.13
PPARGC1AQ9UBK2 MIR4694-201ENST00000578534 80 ntBASIC1.73□□□□□ -2.13
PPARGC1AQ9UBK2 MIR1255B1-201ENST00000636325 63 ntBASIC1.73□□□□□ -2.13
PPARGC1AQ9UBK2 MIR450A1-201ENST00000362262 91 ntBASIC1.72□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-616P-201ENST00000384353 107 ntBASIC1.72□□□□□ -2.13
PPARGC1AQ9UBK2 Y_RNA.544-201ENST00000384650 113 ntBASIC1.72□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.72□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-447P-201ENST00000410293 104 ntBASIC1.72□□□□□ -2.13
PPARGC1AQ9UBK2 RNU6-1118P-201ENST00000410382 104 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms