Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MT-TN-201ENST00000387400 73 ntBASIC1.2□□□□□ -2.22
LRFN1Q9P244 RNU6-1190P-201ENST00000410811 104 ntBASIC1.2□□□□□ -2.22
LRFN1Q9P244 AL020996.3-201ENST00000606617 222 ntBASIC1.2□□□□□ -2.22
LRFN1Q9P244 U7.2-201ENST00000607576 63 ntBASIC1.2□□□□□ -2.22
LRFN1Q9P244 AC011603.4-201ENST00000611325 277 ntBASIC1.2□□□□□ -2.22
LRFN1Q9P244 TUG1_4.1-201ENST00000619464 181 ntBASIC1.2□□□□□ -2.22
LRFN1Q9P244 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
LRFN1Q9P244 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
LRFN1Q9P244 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
LRFN1Q9P244 MIR96-201ENST00000362288 78 ntBASIC1.19□□□□□ -2.22
LRFN1Q9P244 RNY1P6-201ENST00000384193 109 ntBASIC1.19□□□□□ -2.22
LRFN1Q9P244 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
LRFN1Q9P244 HMGN1P33-201ENST00000432945 451 ntBASIC1.19□□□□□ -2.22
LRFN1Q9P244 Y_RNA.757-201ENST00000578934 114 ntBASIC1.19□□□□□ -2.22
LRFN1Q9P244 MIR3910-1-201ENST00000580936 111 ntBASIC1.19□□□□□ -2.22
LRFN1Q9P244 AL391516.1-201ENST00000554380 2449 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
LRFN1Q9P244 Y_RNA.114-201ENST00000363265 113 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 RNU6-1319P-201ENST00000390855 104 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 RNU6-747P-201ENST00000390928 104 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 RNU6-241P-201ENST00000391148 104 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 SNORA26.6-201ENST00000391256 115 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 RNU6-177P-201ENST00000411257 104 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 AC090844.1-201ENST00000422019 156 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 TMSB4XP3-201ENST00000445144 114 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 AC004223.1-201ENST00000479840 271 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 RNA5SP61-201ENST00000516453 100 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 RNA5SP480-201ENST00000516840 109 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 AP000753.3-201ENST00000604083 169 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 AC108081.1-201ENST00000604358 221 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 AC106800.4-201ENST00000614905 153 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 MIR6717-201ENST00000622747 73 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 AC021613.1-201ENST00000623880 111 ntBASIC1.18□□□□□ -2.22
LRFN1Q9P244 MIR377-201ENST00000362145 69 ntBASIC1.17□□□□□ -2.22
LRFN1Q9P244 RNU6-654P-201ENST00000364373 107 ntBASIC1.17□□□□□ -2.22
LRFN1Q9P244 RNU4-16P-201ENST00000364737 141 ntBASIC1.17□□□□□ -2.22
LRFN1Q9P244 SNORD114-24-201ENST00000365029 72 ntBASIC1.17□□□□□ -2.22
LRFN1Q9P244 RNU6-690P-201ENST00000365242 106 ntBASIC1.17□□□□□ -2.22
LRFN1Q9P244 RNU6-1211P-201ENST00000459179 105 ntBASIC1.17□□□□□ -2.22
LRFN1Q9P244 RNU6-240P-201ENST00000516098 97 ntBASIC1.17□□□□□ -2.22
LRFN1Q9P244 RNU6-113P-201ENST00000516653 101 ntBASIC1.17□□□□□ -2.22
LRFN1Q9P244 RNU6-971P-201ENST00000516920 106 ntBASIC1.17□□□□□ -2.22
LRFN1Q9P244 AC036111.3-201ENST00000526389 112 ntBASIC1.17□□□□□ -2.22
LRFN1Q9P244 Z97988.1-201ENST00000637697 135 ntBASIC1.17□□□□□ -2.22
LRFN1Q9P244 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
LRFN1Q9P244 SNORD114-27-201ENST00000363766 70 ntBASIC1.16□□□□□ -2.22
LRFN1Q9P244 SNORA1.1-201ENST00000364671 133 ntBASIC1.16□□□□□ -2.22
LRFN1Q9P244 Y_RNA.280-201ENST00000364765 112 ntBASIC1.16□□□□□ -2.22
LRFN1Q9P244 MIR758-201ENST00000390227 88 ntBASIC1.16□□□□□ -2.22
LRFN1Q9P244 SNORD111-201ENST00000408139 94 ntBASIC1.16□□□□□ -2.22
LRFN1Q9P244 RNA5SP261-201ENST00000410536 106 ntBASIC1.16□□□□□ -2.22
LRFN1Q9P244 RNU4-61P-201ENST00000411243 107 ntBASIC1.16□□□□□ -2.22
LRFN1Q9P244 AL158147.1-201ENST00000443970 75 ntBASIC1.16□□□□□ -2.22
LRFN1Q9P244 SNORD124-201ENST00000459577 104 ntBASIC1.16□□□□□ -2.22
LRFN1Q9P244 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
LRFN1Q9P244 MIR3152-201ENST00000579801 74 ntBASIC1.16□□□□□ -2.22
LRFN1Q9P244 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
LRFN1Q9P244 RNU6-235P-201ENST00000362644 107 ntBASIC1.15□□□□□ -2.23
LRFN1Q9P244 Y_RNA.168-201ENST00000363740 102 ntBASIC1.15□□□□□ -2.23
LRFN1Q9P244 SNORD113.3-201ENST00000364630 78 ntBASIC1.15□□□□□ -2.23
LRFN1Q9P244 Y_RNA.366-201ENST00000365540 102 ntBASIC1.15□□□□□ -2.23
LRFN1Q9P244 RNU6-81P-201ENST00000365608 104 ntBASIC1.15□□□□□ -2.23
LRFN1Q9P244 MIR539-201ENST00000365690 78 ntBASIC1.15□□□□□ -2.23
LRFN1Q9P244 Y_RNA.540-201ENST00000384638 111 ntBASIC1.15□□□□□ -2.23
LRFN1Q9P244 SNORD38B-201ENST00000384690 67 ntBASIC1.15□□□□□ -2.23
LRFN1Q9P244 AC133485.4-201ENST00000561835 220 ntBASIC1.15□□□□□ -2.23
LRFN1Q9P244 AC023827.1-201ENST00000569247 97 ntBASIC1.15□□□□□ -2.23
LRFN1Q9P244 AC138907.4-201ENST00000570107 226 ntBASIC1.15□□□□□ -2.23
LRFN1Q9P244 MIR4264-201ENST00000583520 66 ntBASIC1.15□□□□□ -2.23
LRFN1Q9P244 AC012676.2-201ENST00000619258 186 ntBASIC1.15□□□□□ -2.23
LRFN1Q9P244 SNORD38B-202ENST00000625943 69 ntBASIC1.15□□□□□ -2.23
LRFN1Q9P244 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.15□□□□□ -2.23
LRFN1Q9P244 SNORA2B-201ENST00000384583 137 ntBASIC1.14□□□□□ -2.23
LRFN1Q9P244 RNU6-602P-201ENST00000411155 105 ntBASIC1.14□□□□□ -2.23
LRFN1Q9P244 RPS3AP1-201ENST00000413190 320 ntBASIC1.14□□□□□ -2.23
LRFN1Q9P244 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.14□□□□□ -2.23
LRFN1Q9P244 MIR6515-201ENST00000619843 57 ntBASIC1.14□□□□□ -2.23
LRFN1Q9P244 RNU6-647P-201ENST00000364243 107 ntBASIC1.13□□□□□ -2.23
LRFN1Q9P244 RNU6-580P-201ENST00000365159 107 ntBASIC1.13□□□□□ -2.23
LRFN1Q9P244 Y_RNA.430-201ENST00000384081 110 ntBASIC1.13□□□□□ -2.23
LRFN1Q9P244 RNU6-959P-201ENST00000384671 107 ntBASIC1.13□□□□□ -2.23
LRFN1Q9P244 RNA5SP144-201ENST00000410846 116 ntBASIC1.13□□□□□ -2.23
LRFN1Q9P244 POLR2J4-204ENST00000418424 324 ntBASIC1.13□□□□□ -2.23
LRFN1Q9P244 AC244023.1-201ENST00000426884 112 ntBASIC1.13□□□□□ -2.23
LRFN1Q9P244 FABP5P4-201ENST00000437203 171 ntBASIC1.13□□□□□ -2.23
LRFN1Q9P244 RPS29P1-201ENST00000465274 159 ntBASIC1.13□□□□□ -2.23
LRFN1Q9P244 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.13□□□□□ -2.23
LRFN1Q9P244 IGKV1-22-201ENST00000524313 326 ntBASIC1.13□□□□□ -2.23
LRFN1Q9P244 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.13□□□□□ -2.23
LRFN1Q9P244 MIR4305-201ENST00000583252 102 ntBASIC1.13□□□□□ -2.23
LRFN1Q9P244 AC242498.1-201ENST00000604134 111 ntBASIC1.13□□□□□ -2.23
LRFN1Q9P244 AC021443.1-201ENST00000604478 211 ntBASIC1.13□□□□□ -2.23
LRFN1Q9P244 AL137067.1-201ENST00000615933 120 ntBASIC1.13□□□□□ -2.23
LRFN1Q9P244 AC132825.6-201ENST00000638861 357 ntBASIC1.13□□□□□ -2.23
LRFN1Q9P244 SNORA22.1-201ENST00000362701 134 ntBASIC1.12□□□□□ -2.23
LRFN1Q9P244 Y_RNA.354-201ENST00000365448 111 ntBASIC1.12□□□□□ -2.23
LRFN1Q9P244 RNA5SP95-201ENST00000410319 137 ntBASIC1.12□□□□□ -2.23
LRFN1Q9P244 RN7SKP19-201ENST00000516016 252 ntBASIC1.12□□□□□ -2.23
LRFN1Q9P244 RNU2-35P-201ENST00000516446 142 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms