Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RNA5SP325-201ENST00000363756 130 ntBASIC0.85□□□□□ -2.27
NDE1Q9NXR1 RNU1-124P-201ENST00000363861 145 ntBASIC0.85□□□□□ -2.27
NDE1Q9NXR1 RNU1-93P-201ENST00000364704 169 ntBASIC0.85□□□□□ -2.27
NDE1Q9NXR1 RNU6-449P-201ENST00000383914 107 ntBASIC0.85□□□□□ -2.27
NDE1Q9NXR1 MIR19B1-201ENST00000384829 87 ntBASIC0.85□□□□□ -2.27
NDE1Q9NXR1 SNORD12C-201ENST00000386307 89 ntBASIC0.85□□□□□ -2.27
NDE1Q9NXR1 RNA5SP236-201ENST00000516169 116 ntBASIC0.85□□□□□ -2.27
NDE1Q9NXR1 Y_RNA.686-201ENST00000516548 134 ntBASIC0.85□□□□□ -2.27
NDE1Q9NXR1 AC112693.2-201ENST00000556538 232 ntBASIC0.85□□□□□ -2.27
NDE1Q9NXR1 MIR3646-201ENST00000578301 84 ntBASIC0.85□□□□□ -2.27
NDE1Q9NXR1 AP000753.3-201ENST00000604083 169 ntBASIC0.85□□□□□ -2.27
NDE1Q9NXR1 uc_338.6-201ENST00000613544 171 ntBASIC0.85□□□□□ -2.27
NDE1Q9NXR1 MIR6788-201ENST00000618842 66 ntBASIC0.85□□□□□ -2.27
NDE1Q9NXR1 Y_RNA.778-201ENST00000620203 90 ntBASIC0.85□□□□□ -2.27
NDE1Q9NXR1 RNU6-342P-201ENST00000384521 104 ntBASIC0.84□□□□□ -2.27
NDE1Q9NXR1 Y_RNA.555-201ENST00000384673 110 ntBASIC0.84□□□□□ -2.27
NDE1Q9NXR1 SNORD38B-201ENST00000384690 67 ntBASIC0.84□□□□□ -2.27
NDE1Q9NXR1 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
NDE1Q9NXR1 RNU6-460P-201ENST00000391158 108 ntBASIC0.84□□□□□ -2.27
NDE1Q9NXR1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.84□□□□□ -2.27
NDE1Q9NXR1 SNORA25.12-201ENST00000516202 82 ntBASIC0.84□□□□□ -2.27
NDE1Q9NXR1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.84□□□□□ -2.27
NDE1Q9NXR1 AC106800.4-201ENST00000614905 153 ntBASIC0.84□□□□□ -2.27
NDE1Q9NXR1 MIR6740-201ENST00000618268 113 ntBASIC0.84□□□□□ -2.27
NDE1Q9NXR1 AC021613.1-201ENST00000623880 111 ntBASIC0.84□□□□□ -2.27
NDE1Q9NXR1 SNORD38B-202ENST00000625943 69 ntBASIC0.84□□□□□ -2.27
NDE1Q9NXR1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.84□□□□□ -2.28
NDE1Q9NXR1 SNORD113.3-201ENST00000364630 78 ntBASIC0.83□□□□□ -2.28
NDE1Q9NXR1 Y_RNA.584-201ENST00000391090 114 ntBASIC0.83□□□□□ -2.28
NDE1Q9NXR1 MIR942-201ENST00000401111 86 ntBASIC0.83□□□□□ -2.28
NDE1Q9NXR1 MIR548J-201ENST00000408833 112 ntBASIC0.83□□□□□ -2.28
NDE1Q9NXR1 RNU6-994P-201ENST00000410507 111 ntBASIC0.83□□□□□ -2.28
NDE1Q9NXR1 SNORD83.1-201ENST00000411362 77 ntBASIC0.83□□□□□ -2.28
NDE1Q9NXR1 RPS3AP1-201ENST00000413190 320 ntBASIC0.83□□□□□ -2.28
NDE1Q9NXR1 RNU7-62P-201ENST00000458856 62 ntBASIC0.83□□□□□ -2.28
NDE1Q9NXR1 RNA5SP272-201ENST00000516095 111 ntBASIC0.83□□□□□ -2.28
NDE1Q9NXR1 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
NDE1Q9NXR1 MIR4264-201ENST00000583520 66 ntBASIC0.83□□□□□ -2.28
NDE1Q9NXR1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.83□□□□□ -2.28
NDE1Q9NXR1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.83□□□□□ -2.28
NDE1Q9NXR1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
NDE1Q9NXR1 Y_RNA.168-201ENST00000363740 102 ntBASIC0.82□□□□□ -2.28
NDE1Q9NXR1 Y_RNA.251-201ENST00000364551 99 ntBASIC0.82□□□□□ -2.28
NDE1Q9NXR1 RNY1P6-201ENST00000384193 109 ntBASIC0.82□□□□□ -2.28
NDE1Q9NXR1 SNORA20-201ENST00000384662 132 ntBASIC0.82□□□□□ -2.28
NDE1Q9NXR1 MT-TN-201ENST00000387400 73 ntBASIC0.82□□□□□ -2.28
NDE1Q9NXR1 Y_RNA.580-201ENST00000391004 95 ntBASIC0.82□□□□□ -2.28
NDE1Q9NXR1 RNU5E-3P-201ENST00000515913 68 ntBASIC0.82□□□□□ -2.28
NDE1Q9NXR1 AC010332.2-201ENST00000613083 1904 ntBASIC0.81□□□□□ -2.28
NDE1Q9NXR1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
NDE1Q9NXR1 SNORA22.1-201ENST00000362701 134 ntBASIC0.81□□□□□ -2.28
NDE1Q9NXR1 Y_RNA.180-201ENST00000363867 113 ntBASIC0.81□□□□□ -2.28
NDE1Q9NXR1 RNU6-309P-201ENST00000364573 106 ntBASIC0.81□□□□□ -2.28
NDE1Q9NXR1 RNU6-1335P-201ENST00000365426 107 ntBASIC0.81□□□□□ -2.28
NDE1Q9NXR1 Y_RNA.354-201ENST00000365448 111 ntBASIC0.81□□□□□ -2.28
NDE1Q9NXR1 RNU6-209P-201ENST00000384118 107 ntBASIC0.81□□□□□ -2.28
NDE1Q9NXR1 RNU6-1237P-201ENST00000384777 107 ntBASIC0.81□□□□□ -2.28
NDE1Q9NXR1 MIR588-201ENST00000384900 83 ntBASIC0.81□□□□□ -2.28
NDE1Q9NXR1 RNU6-1319P-201ENST00000390855 104 ntBASIC0.81□□□□□ -2.28
NDE1Q9NXR1 RNU6-747P-201ENST00000390928 104 ntBASIC0.81□□□□□ -2.28
NDE1Q9NXR1 RNU6-241P-201ENST00000391148 104 ntBASIC0.81□□□□□ -2.28
NDE1Q9NXR1 RNU6-177P-201ENST00000411257 104 ntBASIC0.81□□□□□ -2.28
NDE1Q9NXR1 RNU7-197P-201ENST00000458836 62 ntBASIC0.81□□□□□ -2.28
NDE1Q9NXR1 RNU6-113P-201ENST00000516653 101 ntBASIC0.81□□□□□ -2.28
NDE1Q9NXR1 RNU6-255P-201ENST00000516957 105 ntBASIC0.81□□□□□ -2.28
NDE1Q9NXR1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.81□□□□□ -2.28
NDE1Q9NXR1 MIR377-201ENST00000362145 69 ntBASIC0.8□□□□□ -2.28
NDE1Q9NXR1 RNU6-349P-201ENST00000362402 107 ntBASIC0.8□□□□□ -2.28
NDE1Q9NXR1 Y_RNA.170-201ENST00000363746 110 ntBASIC0.8□□□□□ -2.28
NDE1Q9NXR1 Y_RNA.171-201ENST00000363760 102 ntBASIC0.8□□□□□ -2.28
NDE1Q9NXR1 RNU6-690P-201ENST00000365242 106 ntBASIC0.8□□□□□ -2.28
NDE1Q9NXR1 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
NDE1Q9NXR1 SNORD111-201ENST00000408139 94 ntBASIC0.8□□□□□ -2.28
NDE1Q9NXR1 Y_RNA.651-201ENST00000459380 103 ntBASIC0.8□□□□□ -2.28
NDE1Q9NXR1 RNU6-240P-201ENST00000516098 97 ntBASIC0.8□□□□□ -2.28
NDE1Q9NXR1 ACA64.5-201ENST00000516207 127 ntBASIC0.8□□□□□ -2.28
NDE1Q9NXR1 Y_RNA.690-201ENST00000516603 95 ntBASIC0.8□□□□□ -2.28
NDE1Q9NXR1 RNU6-1258P-201ENST00000516911 111 ntBASIC0.8□□□□□ -2.28
NDE1Q9NXR1 MIR6841-201ENST00000637129 72 ntBASIC0.8□□□□□ -2.28
NDE1Q9NXR1 RNU1-36P-201ENST00000365130 165 ntBASIC0.79□□□□□ -2.28
NDE1Q9NXR1 MIR100-201ENST00000385259 80 ntBASIC0.79□□□□□ -2.28
NDE1Q9NXR1 SNORD89-201ENST00000390981 114 ntBASIC0.79□□□□□ -2.28
NDE1Q9NXR1 POLR2J4-204ENST00000418424 324 ntBASIC0.79□□□□□ -2.28
NDE1Q9NXR1 AC113410.1-201ENST00000505029 247 ntBASIC0.79□□□□□ -2.28
NDE1Q9NXR1 FAM71BP1-201ENST00000604431 523 ntBASIC0.79□□□□□ -2.28
NDE1Q9NXR1 AC211469.2-201ENST00000605461 205 ntBASIC0.79□□□□□ -2.28
NDE1Q9NXR1 Y_RNA.205-201ENST00000364128 113 ntBASIC0.78□□□□□ -2.28
NDE1Q9NXR1 SNORD114-24-201ENST00000365029 72 ntBASIC0.78□□□□□ -2.28
NDE1Q9NXR1 RNU6-580P-201ENST00000365159 107 ntBASIC0.78□□□□□ -2.28
NDE1Q9NXR1 SNORD18B-201ENST00000365659 72 ntBASIC0.78□□□□□ -2.28
NDE1Q9NXR1 Y_RNA.400-201ENST00000383963 111 ntBASIC0.78□□□□□ -2.28
NDE1Q9NXR1 MIR200A-201ENST00000384875 90 ntBASIC0.78□□□□□ -2.28
NDE1Q9NXR1 MIR513C-201ENST00000401352 84 ntBASIC0.78□□□□□ -2.28
NDE1Q9NXR1 MIR548I1-201ENST00000408810 149 ntBASIC0.78□□□□□ -2.28
NDE1Q9NXR1 RNU6-1165P-201ENST00000410119 107 ntBASIC0.78□□□□□ -2.28
NDE1Q9NXR1 RNA5SP261-201ENST00000410536 106 ntBASIC0.78□□□□□ -2.28
NDE1Q9NXR1 snoU13.2-201ENST00000459201 104 ntBASIC0.78□□□□□ -2.28
NDE1Q9NXR1 RNU6-346P-201ENST00000516288 111 ntBASIC0.78□□□□□ -2.28
NDE1Q9NXR1 MIR4771-2-201ENST00000577758 74 ntBASIC0.78□□□□□ -2.28
NDE1Q9NXR1 Y_RNA.757-201ENST00000578934 114 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms