Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 RNU7-53P-201ENST00000516705 60 ntBASIC2.07□□□□□ -2.08
SMPD4Q9NXE4 AC121758.2-201ENST00000553271 193 ntBASIC2.07□□□□□ -2.08
SMPD4Q9NXE4 DNAJC19P9-201ENST00000555084 351 ntBASIC2.07□□□□□ -2.08
SMPD4Q9NXE4 MIR4712-201ENST00000583750 82 ntBASIC2.07□□□□□ -2.08
SMPD4Q9NXE4 SNORD38.1-201ENST00000363863 68 ntBASIC2.06□□□□□ -2.08
SMPD4Q9NXE4 RNA5SP99-201ENST00000364020 114 ntBASIC2.06□□□□□ -2.08
SMPD4Q9NXE4 RNU6-1229P-201ENST00000364295 107 ntBASIC2.06□□□□□ -2.08
SMPD4Q9NXE4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.06□□□□□ -2.08
SMPD4Q9NXE4 SNORA1.2-201ENST00000365189 134 ntBASIC2.06□□□□□ -2.08
SMPD4Q9NXE4 U8.13-201ENST00000390842 128 ntBASIC2.06□□□□□ -2.08
SMPD4Q9NXE4 RNA5SP338-201ENST00000410495 85 ntBASIC2.06□□□□□ -2.08
SMPD4Q9NXE4 RNU7-73P-201ENST00000458743 63 ntBASIC2.06□□□□□ -2.08
SMPD4Q9NXE4 RNU6-717P-201ENST00000459076 104 ntBASIC2.06□□□□□ -2.08
SMPD4Q9NXE4 RPL23AP42-201ENST00000471152 471 ntBASIC2.06□□□□□ -2.08
SMPD4Q9NXE4 RNU6-295P-201ENST00000516901 104 ntBASIC2.06□□□□□ -2.08
SMPD4Q9NXE4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SMPD4Q9NXE4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SMPD4Q9NXE4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
SMPD4Q9NXE4 AL596028.1-201ENST00000326971 197 ntBASIC2.05□□□□□ -2.08
SMPD4Q9NXE4 RNA5SP160-201ENST00000364866 120 ntBASIC2.05□□□□□ -2.08
SMPD4Q9NXE4 SNORA70.7-201ENST00000384159 133 ntBASIC2.05□□□□□ -2.08
SMPD4Q9NXE4 MIR526A1-201ENST00000384897 85 ntBASIC2.05□□□□□ -2.08
SMPD4Q9NXE4 AC019129.1-201ENST00000403786 261 ntBASIC2.05□□□□□ -2.08
SMPD4Q9NXE4 BX510359.4-201ENST00000423750 193 ntBASIC2.05□□□□□ -2.08
SMPD4Q9NXE4 MIR5094-201ENST00000578766 85 ntBASIC2.05□□□□□ -2.08
SMPD4Q9NXE4 MIR5089-201ENST00000580047 84 ntBASIC2.05□□□□□ -2.08
SMPD4Q9NXE4 MIR5694-201ENST00000581190 76 ntBASIC2.05□□□□□ -2.08
SMPD4Q9NXE4 AC005786.1-201ENST00000588553 154 ntBASIC2.05□□□□□ -2.08
SMPD4Q9NXE4 AC069114.2-201ENST00000604699 304 ntBASIC2.05□□□□□ -2.08
SMPD4Q9NXE4 AC243994.1-201ENST00000618627 109 ntBASIC2.05□□□□□ -2.08
SMPD4Q9NXE4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
SMPD4Q9NXE4 SNORA16B-201ENST00000364674 135 ntBASIC2.04□□□□□ -2.08
SMPD4Q9NXE4 SNORA6-201ENST00000384033 151 ntBASIC2.04□□□□□ -2.08
SMPD4Q9NXE4 MIR583-201ENST00000384846 75 ntBASIC2.04□□□□□ -2.08
SMPD4Q9NXE4 SNORA40.18-201ENST00000391200 128 ntBASIC2.04□□□□□ -2.08
SMPD4Q9NXE4 AL034345.1-201ENST00000407768 123 ntBASIC2.04□□□□□ -2.08
SMPD4Q9NXE4 RNA5SP270-201ENST00000411361 118 ntBASIC2.04□□□□□ -2.08
SMPD4Q9NXE4 RPL31P63-201ENST00000422565 375 ntBASIC2.04□□□□□ -2.08
SMPD4Q9NXE4 SNORD123-201ENST00000459473 70 ntBASIC2.04□□□□□ -2.08
SMPD4Q9NXE4 AC025033.1-201ENST00000463883 194 ntBASIC2.04□□□□□ -2.08
SMPD4Q9NXE4 RNU7-35P-201ENST00000517174 62 ntBASIC2.04□□□□□ -2.08
SMPD4Q9NXE4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.04□□□□□ -2.08
SMPD4Q9NXE4 MIR6845-201ENST00000613182 61 ntBASIC2.04□□□□□ -2.08
SMPD4Q9NXE4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SMPD4Q9NXE4 RNU1-58P-201ENST00000362413 163 ntBASIC2.03□□□□□ -2.08
SMPD4Q9NXE4 RNA5SP138-201ENST00000365098 114 ntBASIC2.03□□□□□ -2.08
SMPD4Q9NXE4 RNU6-1031P-201ENST00000384773 107 ntBASIC2.03□□□□□ -2.08
SMPD4Q9NXE4 MIR597-201ENST00000384968 97 ntBASIC2.03□□□□□ -2.08
SMPD4Q9NXE4 MIR452-201ENST00000385020 85 ntBASIC2.03□□□□□ -2.08
SMPD4Q9NXE4 MIR136-201ENST00000385207 82 ntBASIC2.03□□□□□ -2.08
SMPD4Q9NXE4 RNU6-788P-201ENST00000390967 104 ntBASIC2.03□□□□□ -2.08
SMPD4Q9NXE4 AC003989.2-201ENST00000440224 169 ntBASIC2.03□□□□□ -2.08
SMPD4Q9NXE4 RNU1-98P-201ENST00000458992 160 ntBASIC2.03□□□□□ -2.08
SMPD4Q9NXE4 RNU6-237P-201ENST00000515985 71 ntBASIC2.03□□□□□ -2.08
SMPD4Q9NXE4 SNORD67.1-201ENST00000516618 108 ntBASIC2.03□□□□□ -2.08
SMPD4Q9NXE4 RNU6-548P-201ENST00000517083 115 ntBASIC2.03□□□□□ -2.08
SMPD4Q9NXE4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 RNU6-457P-201ENST00000363999 107 ntBASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 Y_RNA.448-201ENST00000384185 108 ntBASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 Y_RNA.565-201ENST00000384719 101 ntBASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 Y_RNA.567-201ENST00000384736 106 ntBASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 RNU6-1321P-201ENST00000390905 107 ntBASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 MIR548G-201ENST00000408442 89 ntBASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 RNA5SP261-201ENST00000410536 106 ntBASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 AC245047.7-201ENST00000440265 293 ntBASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 RPS29P28-201ENST00000446439 141 ntBASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 HMGN2P23-201ENST00000456759 269 ntBASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 AL513043.2-201ENST00000573941 143 ntBASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 MIR8055-201ENST00000610739 97 ntBASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 MIR8065-201ENST00000620577 100 ntBASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SMPD4Q9NXE4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SMPD4Q9NXE4 SNORA31.25-201ENST00000517242 134 ntBASIC2.01□□□□□ -2.09
SMPD4Q9NXE4 MIR6840-201ENST00000611937 71 ntBASIC2.01□□□□□ -2.09
SMPD4Q9NXE4 AC105081.1-201ENST00000617727 106 ntBASIC2.01□□□□□ -2.09
SMPD4Q9NXE4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.01□□□□□ -2.09
SMPD4Q9NXE4 Y_RNA.173-201ENST00000363776 113 ntBASIC2□□□□□ -2.09
SMPD4Q9NXE4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2□□□□□ -2.09
SMPD4Q9NXE4 HMGN2P38-201ENST00000423806 265 ntBASIC2□□□□□ -2.09
SMPD4Q9NXE4 AL161932.1-201ENST00000437408 146 ntBASIC2□□□□□ -2.09
SMPD4Q9NXE4 RNA5SP437-201ENST00000517249 129 ntBASIC2□□□□□ -2.09
SMPD4Q9NXE4 AC021506.2-201ENST00000612354 169 ntBASIC2□□□□□ -2.09
SMPD4Q9NXE4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2□□□□□ -2.09
SMPD4Q9NXE4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SMPD4Q9NXE4 RNU4-52P-201ENST00000384209 138 ntBASIC1.99□□□□□ -2.09
SMPD4Q9NXE4 AC099513.1-201ENST00000490423 301 ntBASIC1.99□□□□□ -2.09
SMPD4Q9NXE4 AC093729.1-201ENST00000513074 128 ntBASIC1.99□□□□□ -2.09
SMPD4Q9NXE4 RNVU1-2-201ENST00000516326 135 ntBASIC1.99□□□□□ -2.09
SMPD4Q9NXE4 RNU7-137P-201ENST00000516788 62 ntBASIC1.99□□□□□ -2.09
SMPD4Q9NXE4 AC140658.3-201ENST00000567603 271 ntBASIC1.99□□□□□ -2.09
SMPD4Q9NXE4 MIR3126-201ENST00000577443 74 ntBASIC1.99□□□□□ -2.09
SMPD4Q9NXE4 AL353997.5-201ENST00000618886 171 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 202.4 ms