Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC012676.2-201ENST00000619258 186 ntBASIC1.34□□□□□ -2.19
MKS1Q9NXB0 RNU6-235P-201ENST00000362644 107 ntBASIC1.33□□□□□ -2.2
MKS1Q9NXB0 RNU1-17P-201ENST00000363022 152 ntBASIC1.33□□□□□ -2.2
MKS1Q9NXB0 Y_RNA.470-201ENST00000384307 117 ntBASIC1.33□□□□□ -2.2
MKS1Q9NXB0 MIR563-201ENST00000385080 79 ntBASIC1.33□□□□□ -2.2
MKS1Q9NXB0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.33□□□□□ -2.2
MKS1Q9NXB0 Y_RNA.617-201ENST00000410920 90 ntBASIC1.33□□□□□ -2.2
MKS1Q9NXB0 TMSB4XP3-201ENST00000445144 114 ntBASIC1.33□□□□□ -2.2
MKS1Q9NXB0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
MKS1Q9NXB0 RNU6-1165P-201ENST00000410119 107 ntBASIC1.32□□□□□ -2.2
MKS1Q9NXB0 RPS23P4-201ENST00000487908 423 ntBASIC1.32□□□□□ -2.2
MKS1Q9NXB0 RNY4P20-201ENST00000516678 93 ntBASIC1.32□□□□□ -2.2
MKS1Q9NXB0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MKS1Q9NXB0 SNORA18-201ENST00000384416 132 ntBASIC1.31□□□□□ -2.2
MKS1Q9NXB0 RNU6-1237P-201ENST00000384777 107 ntBASIC1.31□□□□□ -2.2
MKS1Q9NXB0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.31□□□□□ -2.2
MKS1Q9NXB0 RNA5SP237-201ENST00000410414 113 ntBASIC1.31□□□□□ -2.2
MKS1Q9NXB0 RNA5SP33-201ENST00000516687 98 ntBASIC1.31□□□□□ -2.2
MKS1Q9NXB0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.31□□□□□ -2.2
MKS1Q9NXB0 RNU6-94P-201ENST00000607728 107 ntBASIC1.31□□□□□ -2.2
MKS1Q9NXB0 uc_338.6-201ENST00000613544 171 ntBASIC1.31□□□□□ -2.2
MKS1Q9NXB0 AL353997.5-201ENST00000618886 171 ntBASIC1.31□□□□□ -2.2
MKS1Q9NXB0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MKS1Q9NXB0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MKS1Q9NXB0 RNU6-342P-201ENST00000384521 104 ntBASIC1.3□□□□□ -2.2
MKS1Q9NXB0 RNU6-482P-201ENST00000391068 107 ntBASIC1.3□□□□□ -2.2
MKS1Q9NXB0 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.3□□□□□ -2.2
MKS1Q9NXB0 AL645939.4-201ENST00000604495 135 ntBASIC1.3□□□□□ -2.2
MKS1Q9NXB0 MIR200A-201ENST00000384875 90 ntBASIC1.29□□□□□ -2.2
MKS1Q9NXB0 RNU1-123P-201ENST00000458950 160 ntBASIC1.29□□□□□ -2.2
MKS1Q9NXB0 snoU13.21-201ENST00000459368 105 ntBASIC1.29□□□□□ -2.2
MKS1Q9NXB0 RNU6-781P-201ENST00000516377 101 ntBASIC1.29□□□□□ -2.2
MKS1Q9NXB0 AL662814.1-201ENST00000617364 121 ntBASIC1.29□□□□□ -2.2
MKS1Q9NXB0 MIR30D-201ENST00000362283 70 ntBASIC1.28□□□□□ -2.2
MKS1Q9NXB0 RNU6-81P-201ENST00000365608 104 ntBASIC1.28□□□□□ -2.2
MKS1Q9NXB0 MIR1263-201ENST00000408324 86 ntBASIC1.28□□□□□ -2.2
MKS1Q9NXB0 RNU6-994P-201ENST00000410507 111 ntBASIC1.28□□□□□ -2.2
MKS1Q9NXB0 MIR18B-201ENST00000454574 71 ntBASIC1.28□□□□□ -2.2
MKS1Q9NXB0 SNORD124-201ENST00000459577 104 ntBASIC1.28□□□□□ -2.2
MKS1Q9NXB0 AC004223.1-201ENST00000479840 271 ntBASIC1.28□□□□□ -2.2
MKS1Q9NXB0 MIR548AE2-201ENST00000583456 67 ntBASIC1.28□□□□□ -2.2
MKS1Q9NXB0 MIR3660-201ENST00000584845 100 ntBASIC1.28□□□□□ -2.2
MKS1Q9NXB0 RNU6-934P-201ENST00000365154 107 ntBASIC1.27□□□□□ -2.21
MKS1Q9NXB0 RNU6-80P-201ENST00000384195 107 ntBASIC1.27□□□□□ -2.21
MKS1Q9NXB0 MT-TF-201ENST00000387314 71 ntBASIC1.27□□□□□ -2.21
MKS1Q9NXB0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.27□□□□□ -2.21
MKS1Q9NXB0 RNA5SP136-201ENST00000410906 107 ntBASIC1.27□□□□□ -2.21
MKS1Q9NXB0 SNORD83.1-201ENST00000411362 77 ntBASIC1.27□□□□□ -2.21
MKS1Q9NXB0 RNU6-1061P-201ENST00000516530 99 ntBASIC1.27□□□□□ -2.21
MKS1Q9NXB0 AC022523.2-201ENST00000561045 150 ntBASIC1.27□□□□□ -2.21
MKS1Q9NXB0 AC141846.1-201ENST00000568348 142 ntBASIC1.27□□□□□ -2.21
MKS1Q9NXB0 MIR3910-1-201ENST00000580936 111 ntBASIC1.27□□□□□ -2.21
MKS1Q9NXB0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.27□□□□□ -2.21
MKS1Q9NXB0 RNA5SP99-201ENST00000364020 114 ntBASIC1.26□□□□□ -2.21
MKS1Q9NXB0 Y_RNA.218-201ENST00000364218 104 ntBASIC1.26□□□□□ -2.21
MKS1Q9NXB0 Y_RNA.299-201ENST00000364973 94 ntBASIC1.26□□□□□ -2.21
MKS1Q9NXB0 SNORD58C-201ENST00000365223 64 ntBASIC1.26□□□□□ -2.21
MKS1Q9NXB0 RNU6-1104P-201ENST00000384723 104 ntBASIC1.26□□□□□ -2.21
MKS1Q9NXB0 RNU4-69P-201ENST00000410677 143 ntBASIC1.26□□□□□ -2.21
MKS1Q9NXB0 RNU6-1086P-201ENST00000410930 100 ntBASIC1.26□□□□□ -2.21
MKS1Q9NXB0 RN7SKP179-201ENST00000516126 217 ntBASIC1.26□□□□□ -2.21
MKS1Q9NXB0 RNU6-1234P-201ENST00000516877 103 ntBASIC1.26□□□□□ -2.21
MKS1Q9NXB0 RNU7-35P-201ENST00000517174 62 ntBASIC1.26□□□□□ -2.21
MKS1Q9NXB0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
MKS1Q9NXB0 Y_RNA.71-201ENST00000362892 104 ntBASIC1.25□□□□□ -2.21
MKS1Q9NXB0 SNORD114-24-201ENST00000365029 72 ntBASIC1.25□□□□□ -2.21
MKS1Q9NXB0 RNU6-959P-201ENST00000384671 107 ntBASIC1.25□□□□□ -2.21
MKS1Q9NXB0 MIRLET7F2-201ENST00000385277 83 ntBASIC1.25□□□□□ -2.21
MKS1Q9NXB0 SNORA17.3-201ENST00000391159 129 ntBASIC1.25□□□□□ -2.21
MKS1Q9NXB0 RPS26P5-201ENST00000418544 335 ntBASIC1.25□□□□□ -2.21
MKS1Q9NXB0 FABP5P4-201ENST00000437203 171 ntBASIC1.25□□□□□ -2.21
MKS1Q9NXB0 RPS29P28-201ENST00000446439 141 ntBASIC1.25□□□□□ -2.21
MKS1Q9NXB0 AC067940.1-201ENST00000458411 300 ntBASIC1.25□□□□□ -2.21
MKS1Q9NXB0 MIR4303-201ENST00000581299 66 ntBASIC1.25□□□□□ -2.21
MKS1Q9NXB0 MIR4769-201ENST00000584126 77 ntBASIC1.25□□□□□ -2.21
MKS1Q9NXB0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.25□□□□□ -2.21
MKS1Q9NXB0 SNORA32-201ENST00000384072 121 ntBASIC1.24□□□□□ -2.21
MKS1Q9NXB0 SNORA40.6-201ENST00000391153 128 ntBASIC1.24□□□□□ -2.21
MKS1Q9NXB0 MIR942-201ENST00000401111 86 ntBASIC1.24□□□□□ -2.21
MKS1Q9NXB0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.24□□□□□ -2.21
MKS1Q9NXB0 RNU7-107P-201ENST00000459121 61 ntBASIC1.24□□□□□ -2.21
MKS1Q9NXB0 RNU6-772P-201ENST00000516042 105 ntBASIC1.24□□□□□ -2.21
MKS1Q9NXB0 RNU7-79P-201ENST00000516082 62 ntBASIC1.24□□□□□ -2.21
MKS1Q9NXB0 SNORA4-201ENST00000584302 138 ntBASIC1.24□□□□□ -2.21
MKS1Q9NXB0 AC025166.1-201ENST00000612411 163 ntBASIC1.24□□□□□ -2.21
MKS1Q9NXB0 Y_RNA.528-201ENST00000384575 108 ntBASIC1.23□□□□□ -2.21
MKS1Q9NXB0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.23□□□□□ -2.21
MKS1Q9NXB0 COX6CP6-201ENST00000490840 228 ntBASIC1.23□□□□□ -2.21
MKS1Q9NXB0 AC132825.6-201ENST00000638861 357 ntBASIC1.23□□□□□ -2.21
MKS1Q9NXB0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.23□□□□□ -2.21
MKS1Q9NXB0 Y_RNA.198-201ENST00000364013 98 ntBASIC1.22□□□□□ -2.21
MKS1Q9NXB0 Y_RNA.213-201ENST00000364178 111 ntBASIC1.22□□□□□ -2.21
MKS1Q9NXB0 RNY1P13-201ENST00000365030 105 ntBASIC1.22□□□□□ -2.21
MKS1Q9NXB0 RNU6-949P-201ENST00000384040 107 ntBASIC1.22□□□□□ -2.21
MKS1Q9NXB0 MIR1827-201ENST00000408549 66 ntBASIC1.22□□□□□ -2.21
MKS1Q9NXB0 MIR4771-2-201ENST00000577758 74 ntBASIC1.22□□□□□ -2.21
MKS1Q9NXB0 MIR4771-1-201ENST00000582617 74 ntBASIC1.22□□□□□ -2.21
MKS1Q9NXB0 AL512598.1-201ENST00000610158 273 ntBASIC1.22□□□□□ -2.21
MKS1Q9NXB0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
MKS1Q9NXB0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms