Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 MIR1-2-201ENST00000384961 85 ntBASIC-3.98□□□□□ -3.05
SMCO4Q9NRQ5 Y_RNA.591-201ENST00000410228 104 ntBASIC-3.98□□□□□ -3.05
SMCO4Q9NRQ5 MTATP6P19-201ENST00000413797 659 ntBASIC-3.98□□□□□ -3.05
SMCO4Q9NRQ5 RNU6-762P-201ENST00000517107 102 ntBASIC-3.98□□□□□ -3.05
SMCO4Q9NRQ5 AC006566.1-201ENST00000608943 513 ntBASIC-3.98□□□□□ -3.05
SMCO4Q9NRQ5 Y_RNA.310-201ENST00000365063 113 ntBASIC-3.99□□□□□ -3.05
SMCO4Q9NRQ5 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-3.99□□□□□ -3.05
SMCO4Q9NRQ5 RPL35AP4-201ENST00000412007 102 ntBASIC-3.99□□□□□ -3.05
SMCO4Q9NRQ5 AC009878.1-201ENST00000621819 340 ntBASIC-3.99□□□□□ -3.05
SMCO4Q9NRQ5 FGF7P2-201ENST00000332473 296 ntBASIC-4□□□□□ -3.05
SMCO4Q9NRQ5 Y_RNA.54-201ENST00000362766 105 ntBASIC-4□□□□□ -3.05
SMCO4Q9NRQ5 Y_RNA.341-201ENST00000365341 102 ntBASIC-4□□□□□ -3.05
SMCO4Q9NRQ5 RNU6-710P-201ENST00000410424 105 ntBASIC-4□□□□□ -3.05
SMCO4Q9NRQ5 FGF7P4-201ENST00000509595 295 ntBASIC-4□□□□□ -3.05
SMCO4Q9NRQ5 Y_RNA.698-201ENST00000516798 118 ntBASIC-4□□□□□ -3.05
SMCO4Q9NRQ5 AP002795.1-201ENST00000534879 84 ntBASIC-4□□□□□ -3.05
SMCO4Q9NRQ5 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-4□□□□□ -3.05
SMCO4Q9NRQ5 Y_RNA.106-201ENST00000363189 100 ntBASIC-4.01□□□□□ -3.05
SMCO4Q9NRQ5 RNU4-80P-201ENST00000363200 141 ntBASIC-4.01□□□□□ -3.05
SMCO4Q9NRQ5 RNU6-108P-201ENST00000365558 107 ntBASIC-4.01□□□□□ -3.05
SMCO4Q9NRQ5 RNU6-54P-201ENST00000365563 107 ntBASIC-4.01□□□□□ -3.05
SMCO4Q9NRQ5 MIR216B-201ENST00000390186 82 ntBASIC-4.01□□□□□ -3.05
SMCO4Q9NRQ5 RNU4-88P-201ENST00000411220 86 ntBASIC-4.01□□□□□ -3.05
SMCO4Q9NRQ5 RNU6-436P-201ENST00000516171 114 ntBASIC-4.01□□□□□ -3.05
SMCO4Q9NRQ5 Y_RNA.706-201ENST00000516933 99 ntBASIC-4.01□□□□□ -3.05
SMCO4Q9NRQ5 AC084781.2-201ENST00000615568 161 ntBASIC-4.01□□□□□ -3.05
SMCO4Q9NRQ5 SNORD114-10-201ENST00000363409 72 ntBASIC-4.02□□□□□ -3.05
SMCO4Q9NRQ5 RNU6-1200P-201ENST00000384162 107 ntBASIC-4.02□□□□□ -3.05
SMCO4Q9NRQ5 AC144568.1-201ENST00000520139 137 ntBASIC-4.02□□□□□ -3.05
SMCO4Q9NRQ5 Y_RNA.182-201ENST00000363880 111 ntBASIC-4.03□□□□□ -3.05
SMCO4Q9NRQ5 Y_RNA.228-201ENST00000364346 98 ntBASIC-4.03□□□□□ -3.05
SMCO4Q9NRQ5 Y_RNA.342-201ENST00000365352 113 ntBASIC-4.03□□□□□ -3.05
SMCO4Q9NRQ5 RNU7-80P-201ENST00000459562 61 ntBASIC-4.03□□□□□ -3.05
SMCO4Q9NRQ5 SNORD67.1-201ENST00000516618 108 ntBASIC-4.03□□□□□ -3.05
SMCO4Q9NRQ5 AC021613.1-201ENST00000623880 111 ntBASIC-4.03□□□□□ -3.05
SMCO4Q9NRQ5 Y_RNA.76-201ENST00000362931 109 ntBASIC-4.04□□□□□ -3.06
SMCO4Q9NRQ5 RNU6-879P-201ENST00000364328 108 ntBASIC-4.04□□□□□ -3.06
SMCO4Q9NRQ5 Y_RNA.454-201ENST00000384224 113 ntBASIC-4.04□□□□□ -3.06
SMCO4Q9NRQ5 MIR181A1-201ENST00000385026 110 ntBASIC-4.04□□□□□ -3.06
SMCO4Q9NRQ5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-4.04□□□□□ -3.06
SMCO4Q9NRQ5 AF228730.3-201ENST00000436691 102 ntBASIC-4.04□□□□□ -3.06
SMCO4Q9NRQ5 MIR5696-201ENST00000578474 85 ntBASIC-4.04□□□□□ -3.06
SMCO4Q9NRQ5 MIR3123-201ENST00000583417 75 ntBASIC-4.04□□□□□ -3.06
SMCO4Q9NRQ5 HULC.1-201ENST00000612720 240 ntBASIC-4.04□□□□□ -3.06
SMCO4Q9NRQ5 MIR5683-201ENST00000636514 76 ntBASIC-4.04□□□□□ -3.06
SMCO4Q9NRQ5 RNU6-961P-201ENST00000363893 105 ntBASIC-4.05□□□□□ -3.06
SMCO4Q9NRQ5 RNU6-893P-201ENST00000458841 100 ntBASIC-4.05□□□□□ -3.06
SMCO4Q9NRQ5 RNU6-1170P-201ENST00000515974 106 ntBASIC-4.05□□□□□ -3.06
SMCO4Q9NRQ5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-4.05□□□□□ -3.06
SMCO4Q9NRQ5 AC091932.4-201ENST00000623386 200 ntBASIC-4.05□□□□□ -3.06
SMCO4Q9NRQ5 Y_RNA.400-201ENST00000383963 111 ntBASIC-4.06□□□□□ -3.06
SMCO4Q9NRQ5 SNORD61-201ENST00000384252 73 ntBASIC-4.06□□□□□ -3.06
SMCO4Q9NRQ5 RNU6-102P-201ENST00000384485 104 ntBASIC-4.06□□□□□ -3.06
SMCO4Q9NRQ5 RNU6-903P-201ENST00000391270 109 ntBASIC-4.06□□□□□ -3.06
SMCO4Q9NRQ5 Y_RNA.613-201ENST00000410726 97 ntBASIC-4.06□□□□□ -3.06
SMCO4Q9NRQ5 RNU7-106P-201ENST00000459514 67 ntBASIC-4.06□□□□□ -3.06
SMCO4Q9NRQ5 Y_RNA.631-201ENST00000459607 101 ntBASIC-4.06□□□□□ -3.06
SMCO4Q9NRQ5 RNU6-189P-201ENST00000516120 101 ntBASIC-4.06□□□□□ -3.06
SMCO4Q9NRQ5 MTATP6P24-201ENST00000576835 677 ntBASIC-4.06□□□□□ -3.06
SMCO4Q9NRQ5 AC099654.13-201ENST00000639774 207 ntBASIC-4.06□□□□□ -3.06
SMCO4Q9NRQ5 SNORA63.6-201ENST00000364921 119 ntBASIC-4.07□□□□□ -3.06
SMCO4Q9NRQ5 Y_RNA.358-201ENST00000365491 99 ntBASIC-4.07□□□□□ -3.06
SMCO4Q9NRQ5 RNU4-17P-201ENST00000365598 141 ntBASIC-4.07□□□□□ -3.06
SMCO4Q9NRQ5 Y_RNA.528-201ENST00000384575 108 ntBASIC-4.07□□□□□ -3.06
SMCO4Q9NRQ5 RNU6-1270P-201ENST00000517128 108 ntBASIC-4.07□□□□□ -3.06
SMCO4Q9NRQ5 MIR5692C1-201ENST00000585309 91 ntBASIC-4.07□□□□□ -3.06
SMCO4Q9NRQ5 RNU6-888P-201ENST00000363010 101 ntBASIC-4.08□□□□□ -3.06
SMCO4Q9NRQ5 Y_RNA.101-201ENST00000363154 102 ntBASIC-4.08□□□□□ -3.06
SMCO4Q9NRQ5 Y_RNA.207-201ENST00000364142 106 ntBASIC-4.08□□□□□ -3.06
SMCO4Q9NRQ5 RNU6-1163P-201ENST00000364516 107 ntBASIC-4.08□□□□□ -3.06
SMCO4Q9NRQ5 RNY4P28-201ENST00000365281 93 ntBASIC-4.08□□□□□ -3.06
SMCO4Q9NRQ5 Y_RNA.472-201ENST00000384322 102 ntBASIC-4.08□□□□□ -3.06
SMCO4Q9NRQ5 SNORA36B-201ENST00000410438 131 ntBASIC-4.08□□□□□ -3.06
SMCO4Q9NRQ5 RNU2-66P-201ENST00000410650 161 ntBASIC-4.08□□□□□ -3.06
SMCO4Q9NRQ5 SNORD113-7-201ENST00000363762 77 ntBASIC-4.09□□□□□ -3.06
SMCO4Q9NRQ5 Y_RNA.486-201ENST00000384398 107 ntBASIC-4.1□□□□□ -3.07
SMCO4Q9NRQ5 UBE2V1P7-201ENST00000446395 340 ntBASIC-4.1□□□□□ -3.07
SMCO4Q9NRQ5 CCDC34P1-201ENST00000507441 517 ntBASIC-4.1□□□□□ -3.07
SMCO4Q9NRQ5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-4.1□□□□□ -3.07
SMCO4Q9NRQ5 MIR4662B-201ENST00000579498 81 ntBASIC-4.1□□□□□ -3.07
SMCO4Q9NRQ5 MIR466-201ENST00000580653 84 ntBASIC-4.1□□□□□ -3.07
SMCO4Q9NRQ5 Z84480.1-201ENST00000605131 311 ntBASIC-4.1□□□□□ -3.07
SMCO4Q9NRQ5 MTND1P34-201ENST00000438556 671 ntBASIC-4.11□□□□□ -3.07
SMCO4Q9NRQ5 MTND3P1-201ENST00000441336 220 ntBASIC-4.11□□□□□ -3.07
SMCO4Q9NRQ5 RNU7-187P-201ENST00000458985 68 ntBASIC-4.11□□□□□ -3.07
SMCO4Q9NRQ5 RNU7-180P-201ENST00000459240 63 ntBASIC-4.11□□□□□ -3.07
SMCO4Q9NRQ5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-4.11□□□□□ -3.07
SMCO4Q9NRQ5 AC060780.3-201ENST00000589464 80 ntBASIC-4.11□□□□□ -3.07
SMCO4Q9NRQ5 AL121895.2-201ENST00000619558 447 ntBASIC-4.11□□□□□ -3.07
SMCO4Q9NRQ5 Y_RNA.53-201ENST00000362765 102 ntBASIC-4.12□□□□□ -3.07
SMCO4Q9NRQ5 Y_RNA.596-201ENST00000410462 109 ntBASIC-4.12□□□□□ -3.07
SMCO4Q9NRQ5 ACA59.1-201ENST00000515966 143 ntBASIC-4.12□□□□□ -3.07
SMCO4Q9NRQ5 MTND4P7-201ENST00000523876 130 ntBASIC-4.12□□□□□ -3.07
SMCO4Q9NRQ5 DLEU2_5.2-201ENST00000610606 84 ntBASIC-4.12□□□□□ -3.07
SMCO4Q9NRQ5 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-4.12□□□□□ -3.07
SMCO4Q9NRQ5 RNA5SP93-201ENST00000362525 114 ntBASIC-4.13□□□□□ -3.07
SMCO4Q9NRQ5 Y_RNA.525-201ENST00000384570 113 ntBASIC-4.13□□□□□ -3.07
SMCO4Q9NRQ5 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-4.13□□□□□ -3.07
SMCO4Q9NRQ5 PCMTD1P1-201ENST00000455560 355 ntBASIC-4.13□□□□□ -3.07
SMCO4Q9NRQ5 RNU6-408P-201ENST00000515910 100 ntBASIC-4.13□□□□□ -3.07
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms