Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 RNU6-602P-201ENST00000411155 105 ntBASIC1.53□□□□□ -2.16
NRIP3Q9NQ35 AL096861.1-201ENST00000610899 123 ntBASIC1.53□□□□□ -2.16
NRIP3Q9NQ35 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.53□□□□□ -2.16
NRIP3Q9NQ35 AC012531.4-201ENST00000616509 177 ntBASIC1.53□□□□□ -2.16
NRIP3Q9NQ35 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 SNORD114-1-201ENST00000362705 72 ntBASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 RNU6-363P-201ENST00000362895 105 ntBASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 Y_RNA.247-201ENST00000364500 92 ntBASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 SNORD1A-201ENST00000364968 72 ntBASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 RNA5SP259-201ENST00000365541 109 ntBASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 Y_RNA.369-201ENST00000365568 117 ntBASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 SNORA70.7-201ENST00000384159 133 ntBASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 RNU6-1065P-201ENST00000384513 106 ntBASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 MIR520C-201ENST00000385005 87 ntBASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 SNORA7.5-201ENST00000410672 110 ntBASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 RNU6-795P-201ENST00000516323 103 ntBASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 DNAJC19P9-201ENST00000555084 351 ntBASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 Z97988.1-201ENST00000637697 135 ntBASIC1.52□□□□□ -2.17
NRIP3Q9NQ35 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 MIR302D-201ENST00000362275 68 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 RNY3P2-201ENST00000362918 102 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 RNA5SP363-201ENST00000365072 115 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 SNORA70B-201ENST00000384210 135 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 Y_RNA.466-201ENST00000384294 113 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 SNORA40.18-201ENST00000391200 128 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 MTATP8P2-201ENST00000435212 202 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 AC009474.2-201ENST00000451383 136 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 snoU13.16-201ENST00000459350 104 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 RNU1-41P-201ENST00000516161 162 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 RNU1-48P-201ENST00000516400 162 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 RNU7-43P-201ENST00000516554 64 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 RNU6-762P-201ENST00000517107 102 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 AC015688.6-201ENST00000577737 104 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 AC006254.2-201ENST00000603259 279 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 AP000942.3-201ENST00000603702 160 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 AC084768.2-201ENST00000622736 221 ntBASIC1.51□□□□□ -2.17
NRIP3Q9NQ35 Y_RNA.78-201ENST00000362970 110 ntBASIC1.5□□□□□ -2.17
NRIP3Q9NQ35 Y_RNA.155-201ENST00000363632 101 ntBASIC1.5□□□□□ -2.17
NRIP3Q9NQ35 Y_RNA.342-201ENST00000365352 113 ntBASIC1.5□□□□□ -2.17
NRIP3Q9NQ35 MIR583-201ENST00000384846 75 ntBASIC1.5□□□□□ -2.17
NRIP3Q9NQ35 MIR1912-201ENST00000410389 80 ntBASIC1.5□□□□□ -2.17
NRIP3Q9NQ35 AC027119.1-201ENST00000440877 241 ntBASIC1.5□□□□□ -2.17
NRIP3Q9NQ35 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
NRIP3Q9NQ35 UBL5P1-201ENST00000507979 193 ntBASIC1.5□□□□□ -2.17
NRIP3Q9NQ35 RNU6-521P-201ENST00000516663 105 ntBASIC1.5□□□□□ -2.17
NRIP3Q9NQ35 MIR4255-201ENST00000579351 72 ntBASIC1.5□□□□□ -2.17
NRIP3Q9NQ35 MIR3937-201ENST00000580135 106 ntBASIC1.5□□□□□ -2.17
NRIP3Q9NQ35 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
NRIP3Q9NQ35 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
NRIP3Q9NQ35 AL161722.3-201ENST00000605789 2983 ntBASIC1.5□□□□□ -2.17
NRIP3Q9NQ35 SNORA25.3-201ENST00000363205 127 ntBASIC1.49□□□□□ -2.17
NRIP3Q9NQ35 RNU6-832P-201ENST00000363319 107 ntBASIC1.49□□□□□ -2.17
NRIP3Q9NQ35 SNORD73B-201ENST00000364394 72 ntBASIC1.49□□□□□ -2.17
NRIP3Q9NQ35 SNORA18-201ENST00000384416 132 ntBASIC1.49□□□□□ -2.17
NRIP3Q9NQ35 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
NRIP3Q9NQ35 U8.13-201ENST00000390842 128 ntBASIC1.49□□□□□ -2.17
NRIP3Q9NQ35 RNU6-733P-201ENST00000410759 104 ntBASIC1.49□□□□□ -2.17
NRIP3Q9NQ35 AC245047.7-201ENST00000440265 293 ntBASIC1.49□□□□□ -2.17
NRIP3Q9NQ35 RPS29P23-201ENST00000458635 123 ntBASIC1.49□□□□□ -2.17
NRIP3Q9NQ35 SNORA40.13-201ENST00000516379 120 ntBASIC1.49□□□□□ -2.17
NRIP3Q9NQ35 SNORD111.1-201ENST00000516421 86 ntBASIC1.49□□□□□ -2.17
NRIP3Q9NQ35 RNU6-250P-201ENST00000516958 103 ntBASIC1.49□□□□□ -2.17
NRIP3Q9NQ35 RNU7-35P-201ENST00000517174 62 ntBASIC1.49□□□□□ -2.17
NRIP3Q9NQ35 MIR3152-201ENST00000579801 74 ntBASIC1.49□□□□□ -2.17
NRIP3Q9NQ35 MIR4251-201ENST00000635819 61 ntBASIC1.49□□□□□ -2.17
NRIP3Q9NQ35 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
NRIP3Q9NQ35 RNU6-409P-201ENST00000384114 104 ntBASIC1.48□□□□□ -2.17
NRIP3Q9NQ35 RNU6-1201P-201ENST00000384227 107 ntBASIC1.48□□□□□ -2.17
NRIP3Q9NQ35 Y_RNA.544-201ENST00000384650 113 ntBASIC1.48□□□□□ -2.17
NRIP3Q9NQ35 AC244023.1-201ENST00000426884 112 ntBASIC1.48□□□□□ -2.17
NRIP3Q9NQ35 DEFB131E-201ENST00000532329 154 ntBASIC1.48□□□□□ -2.17
NRIP3Q9NQ35 MIR4694-201ENST00000578534 80 ntBASIC1.48□□□□□ -2.17
NRIP3Q9NQ35 MIR4777-201ENST00000583710 86 ntBASIC1.48□□□□□ -2.17
NRIP3Q9NQ35 AC242498.1-201ENST00000604134 111 ntBASIC1.48□□□□□ -2.17
NRIP3Q9NQ35 uc_338.6-201ENST00000613544 171 ntBASIC1.48□□□□□ -2.17
NRIP3Q9NQ35 MALAT1.1-201ENST00000618249 95 ntBASIC1.48□□□□□ -2.17
NRIP3Q9NQ35 Y_RNA.818-201ENST00000618813 71 ntBASIC1.48□□□□□ -2.17
NRIP3Q9NQ35 RNU6-294P-201ENST00000364999 102 ntBASIC1.47□□□□□ -2.17
NRIP3Q9NQ35 Y_RNA.388-201ENST00000383919 113 ntBASIC1.47□□□□□ -2.17
NRIP3Q9NQ35 RNU6-1237P-201ENST00000384777 107 ntBASIC1.47□□□□□ -2.17
NRIP3Q9NQ35 MIR206-201ENST00000384872 86 ntBASIC1.47□□□□□ -2.17
NRIP3Q9NQ35 RNU6-644P-201ENST00000391155 98 ntBASIC1.47□□□□□ -2.17
NRIP3Q9NQ35 MRPL35P3-201ENST00000421557 364 ntBASIC1.47□□□□□ -2.17
NRIP3Q9NQ35 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.47□□□□□ -2.17
NRIP3Q9NQ35 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.47□□□□□ -2.17
NRIP3Q9NQ35 RNU7-61P-201ENST00000515897 61 ntBASIC1.47□□□□□ -2.17
NRIP3Q9NQ35 SCARNA23-201ENST00000516060 130 ntBASIC1.47□□□□□ -2.17
NRIP3Q9NQ35 SNORD67.1-201ENST00000516618 108 ntBASIC1.47□□□□□ -2.17
NRIP3Q9NQ35 RNU6-1006P-201ENST00000516998 103 ntBASIC1.47□□□□□ -2.17
NRIP3Q9NQ35 PRELID3BP2-201ENST00000605362 201 ntBASIC1.47□□□□□ -2.17
NRIP3Q9NQ35 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.47□□□□□ -2.17
NRIP3Q9NQ35 AC105081.1-201ENST00000617727 106 ntBASIC1.47□□□□□ -2.17
NRIP3Q9NQ35 Y_RNA.290-201ENST00000364879 114 ntBASIC1.46□□□□□ -2.18
NRIP3Q9NQ35 Y_RNA.299-201ENST00000364973 94 ntBASIC1.46□□□□□ -2.18
NRIP3Q9NQ35 Y_RNA.467-201ENST00000384297 102 ntBASIC1.46□□□□□ -2.18
NRIP3Q9NQ35 RNU6-1113P-201ENST00000384348 107 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms