Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
HMG20AQ9NP66 RNU7-80P-201ENST00000459562 61 ntBASIC0.14□□□□□ -2.39
HMG20AQ9NP66 RNU6-863P-201ENST00000515989 104 ntBASIC0.14□□□□□ -2.39
HMG20AQ9NP66 RNA5SP436-201ENST00000516020 115 ntBASIC0.14□□□□□ -2.39
HMG20AQ9NP66 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.14□□□□□ -2.39
HMG20AQ9NP66 MIR4491-201ENST00000581087 68 ntBASIC0.14□□□□□ -2.39
HMG20AQ9NP66 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 RNU4-16P-201ENST00000364737 141 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 Y_RNA.277-201ENST00000364754 102 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 RNU6-728P-201ENST00000365375 104 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 RNU4-17P-201ENST00000365598 141 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 Y_RNA.430-201ENST00000384081 110 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 Y_RNA.461-201ENST00000384263 103 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 RNU6-472P-201ENST00000384299 107 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 AC073261.1-201ENST00000429409 121 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 RPL39P25-201ENST00000449384 154 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 SNORA31.14-201ENST00000516728 116 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 RNU6-1258P-201ENST00000516911 111 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 MTND5P34-201ENST00000568888 325 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 MIR6082-201ENST00000613604 109 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 MIR8062-201ENST00000621515 85 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 AC021613.1-201ENST00000623880 111 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 MIR6841-201ENST00000637129 72 ntBASIC0.13□□□□□ -2.39
HMG20AQ9NP66 MIR335-201ENST00000362173 94 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 Y_RNA.36-201ENST00000362602 112 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 SNORA22.1-201ENST00000362701 134 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 Y_RNA.54-201ENST00000362766 105 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 RNU6-1292P-201ENST00000383856 107 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 Y_RNA.393-201ENST00000383936 102 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 Y_RNA.396-201ENST00000383949 103 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 RNU6-1227P-201ENST00000383981 107 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 SNORA72.6-201ENST00000384520 129 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 RNY1P4-201ENST00000384595 115 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 MIR193B-201ENST00000384907 83 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 MIR1302-6-201ENST00000408466 90 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 RNA5SP261-201ENST00000410536 106 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 AL512326.2-201ENST00000426359 151 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 SUMO1P3-201ENST00000439961 304 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 AC069271.1-201ENST00000445577 156 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 AL121914.1-201ENST00000450188 156 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 SNORA25.16-201ENST00000516741 121 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 AC044792.1-201ENST00000593294 196 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 AL365205.2-201ENST00000594586 68 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 uc_338.16-201ENST00000621804 95 ntBASIC0.12□□□□□ -2.39
HMG20AQ9NP66 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.12□□□□□ -2.39
HMG20AQ9NP66 MTND5P32-201ENST00000560711 1802 ntBASIC0.11□□□□□ -2.39
HMG20AQ9NP66 RNU6-978P-201ENST00000364371 103 ntBASIC0.11□□□□□ -2.39
HMG20AQ9NP66 Y_RNA.454-201ENST00000384224 113 ntBASIC0.11□□□□□ -2.39
HMG20AQ9NP66 SNORA18-201ENST00000384416 132 ntBASIC0.11□□□□□ -2.39
HMG20AQ9NP66 RNA5SP268-201ENST00000516828 124 ntBASIC0.11□□□□□ -2.39
HMG20AQ9NP66 SCARNA15-202ENST00000516881 127 ntBASIC0.11□□□□□ -2.39
HMG20AQ9NP66 MIR3152-201ENST00000579801 74 ntBASIC0.11□□□□□ -2.39
HMG20AQ9NP66 PVT1_3.1-201ENST00000620853 95 ntBASIC0.11□□□□□ -2.39
HMG20AQ9NP66 Y_RNA.171-201ENST00000363760 102 ntBASIC0.1□□□□□ -2.39
HMG20AQ9NP66 RNU6-1336P-201ENST00000383886 109 ntBASIC0.1□□□□□ -2.39
HMG20AQ9NP66 RNU6-291P-201ENST00000384720 107 ntBASIC0.1□□□□□ -2.39
HMG20AQ9NP66 SNORA79-201ENST00000408376 140 ntBASIC0.1□□□□□ -2.39
HMG20AQ9NP66 RNU4-43P-201ENST00000410628 137 ntBASIC0.1□□□□□ -2.39
HMG20AQ9NP66 RNU6-469P-201ENST00000516253 101 ntBASIC0.1□□□□□ -2.39
HMG20AQ9NP66 RNU6-1149P-201ENST00000516810 97 ntBASIC0.1□□□□□ -2.39
HMG20AQ9NP66 AP003327.1-201ENST00000529684 127 ntBASIC0.1□□□□□ -2.39
HMG20AQ9NP66 AP003072.1-201ENST00000531740 145 ntBASIC0.1□□□□□ -2.39
HMG20AQ9NP66 MIR7107-201ENST00000611489 80 ntBASIC0.1□□□□□ -2.39
HMG20AQ9NP66 MIR6755-201ENST00000619993 66 ntBASIC0.1□□□□□ -2.39
HMG20AQ9NP66 MIR924-201ENST00000638017 53 ntBASIC0.1□□□□□ -2.39
HMG20AQ9NP66 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.262-201ENST00000364641 102 ntBASIC0.09□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.292-201ENST00000364904 97 ntBASIC0.09□□□□□ -2.4
HMG20AQ9NP66 RNY1P13-201ENST00000365030 105 ntBASIC0.09□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.308-201ENST00000365043 101 ntBASIC0.09□□□□□ -2.4
HMG20AQ9NP66 RNU6-949P-201ENST00000384040 107 ntBASIC0.09□□□□□ -2.4
HMG20AQ9NP66 RNU6-187P-201ENST00000384139 106 ntBASIC0.09□□□□□ -2.4
HMG20AQ9NP66 SNORA20-201ENST00000384662 132 ntBASIC0.09□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.574-201ENST00000384766 95 ntBASIC0.09□□□□□ -2.4
HMG20AQ9NP66 MIR489-201ENST00000384923 84 ntBASIC0.09□□□□□ -2.4
HMG20AQ9NP66 RNU6-493P-201ENST00000391321 108 ntBASIC0.09□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.720-201ENST00000517166 92 ntBASIC0.09□□□□□ -2.4
HMG20AQ9NP66 AC069113.3-201ENST00000521019 150 ntBASIC0.09□□□□□ -2.4
HMG20AQ9NP66 MIR378D2-201ENST00000580636 98 ntBASIC0.09□□□□□ -2.4
HMG20AQ9NP66 MIR4744-201ENST00000581563 82 ntBASIC0.09□□□□□ -2.4
HMG20AQ9NP66 RNU2-4P-201ENST00000606190 192 ntBASIC0.09□□□□□ -2.4
HMG20AQ9NP66 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.09□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.539-201ENST00000384635 107 ntBASIC0.08□□□□□ -2.4
HMG20AQ9NP66 MIR548F4-201ENST00000408515 105 ntBASIC0.08□□□□□ -2.4
HMG20AQ9NP66 RNU2-38P-201ENST00000410856 79 ntBASIC0.08□□□□□ -2.4
HMG20AQ9NP66 RNU7-70P-201ENST00000516941 66 ntBASIC0.08□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.757-201ENST00000578934 114 ntBASIC0.08□□□□□ -2.4
HMG20AQ9NP66 RNU6-103P-201ENST00000363686 107 ntBASIC0.07□□□□□ -2.4
HMG20AQ9NP66 RNA5SP245-201ENST00000364239 121 ntBASIC0.07□□□□□ -2.4
HMG20AQ9NP66 RNU6-923P-201ENST00000364753 107 ntBASIC0.07□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.518-201ENST00000384552 113 ntBASIC0.07□□□□□ -2.4
HMG20AQ9NP66 Y_RNA.536-201ENST00000384621 113 ntBASIC0.07□□□□□ -2.4
HMG20AQ9NP66 RNU6-535P-201ENST00000384722 107 ntBASIC0.07□□□□□ -2.4
HMG20AQ9NP66 RNU6-578P-201ENST00000390980 103 ntBASIC0.07□□□□□ -2.4
HMG20AQ9NP66 RNU2-59P-201ENST00000410482 191 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms