Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 SNORA18-201ENST00000384416 132 ntBASIC-0.37□□□□□ -2.47
USP42Q9H9J4 MIR106A-201ENST00000384870 81 ntBASIC-0.37□□□□□ -2.47
USP42Q9H9J4 SNORD115-46-201ENST00000390982 71 ntBASIC-0.37□□□□□ -2.47
USP42Q9H9J4 RPS29P8-201ENST00000445109 171 ntBASIC-0.37□□□□□ -2.47
USP42Q9H9J4 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.37□□□□□ -2.47
USP42Q9H9J4 RNU6-126P-201ENST00000516685 103 ntBASIC-0.37□□□□□ -2.47
USP42Q9H9J4 RNU6-531P-201ENST00000516694 104 ntBASIC-0.37□□□□□ -2.47
USP42Q9H9J4 RNU2-60P-201ENST00000517290 128 ntBASIC-0.37□□□□□ -2.47
USP42Q9H9J4 AC006157.1-201ENST00000611750 366 ntBASIC-0.37□□□□□ -2.47
USP42Q9H9J4 AC093783.1-201ENST00000612976 329 ntBASIC-0.37□□□□□ -2.47
USP42Q9H9J4 AL442067.1-201ENST00000613261 223 ntBASIC-0.37□□□□□ -2.47
USP42Q9H9J4 MIR376A1-201ENST00000616574 68 ntBASIC-0.37□□□□□ -2.47
USP42Q9H9J4 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 SNORD115-24-201ENST00000363528 82 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 RNU6-30P-201ENST00000384561 107 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
USP42Q9H9J4 SNRPGP8-201ENST00000454064 226 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 AP003072.1-201ENST00000531740 145 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.38□□□□□ -2.47
USP42Q9H9J4 MIR5706-201ENST00000579841 80 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 MIR4677-201ENST00000584153 80 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 AC097639.2-201ENST00000603159 172 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 snoU18.1-201ENST00000629629 71 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 SNORA22.1-201ENST00000362701 134 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 RNU6-702P-201ENST00000364982 107 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 SNORD14C-201ENST00000365382 88 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 SNORA22B-201ENST00000383876 138 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 RNA5SP300-201ENST00000391197 107 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 MTND4LP11-201ENST00000422184 280 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 RNU7-161P-201ENST00000517289 62 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 AC011921.3-201ENST00000605540 361 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 uc_338.28-201ENST00000612082 187 ntBASIC-0.38□□□□□ -2.47
USP42Q9H9J4 RNU4-90P-201ENST00000362773 141 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 MIR548L-201ENST00000408303 86 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 RNU6-121P-201ENST00000410525 99 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 AC244505.6-201ENST00000452829 130 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 SNORD126-201ENST00000459475 77 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 RNU7-80P-201ENST00000459562 61 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 RNA5SP153-201ENST00000516498 76 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 MIR3129-201ENST00000581095 76 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 MIR5197-201ENST00000583721 112 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 U7.6-201ENST00000610841 64 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 MIR6514-201ENST00000622549 70 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 AC021613.1-201ENST00000623880 111 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 MIR1302-1-201ENST00000637932 143 ntBASIC-0.39□□□□□ -2.47
USP42Q9H9J4 MTND5P32-201ENST00000560711 1802 ntBASIC-0.4□□□□□ -2.47
USP42Q9H9J4 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.4□□□□□ -2.47
USP42Q9H9J4 SNORD49B-201ENST00000365172 72 ntBASIC-0.4□□□□□ -2.47
USP42Q9H9J4 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.4□□□□□ -2.47
USP42Q9H9J4 MIR626-201ENST00000385032 94 ntBASIC-0.4□□□□□ -2.47
USP42Q9H9J4 MT-TT-201ENST00000387460 66 ntBASIC-0.4□□□□□ -2.47
USP42Q9H9J4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.4□□□□□ -2.47
USP42Q9H9J4 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.4□□□□□ -2.47
USP42Q9H9J4 RNU2-55P-201ENST00000411146 174 ntBASIC-0.4□□□□□ -2.47
USP42Q9H9J4 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.4□□□□□ -2.47
USP42Q9H9J4 MIR5688-201ENST00000580619 83 ntBASIC-0.4□□□□□ -2.47
USP42Q9H9J4 AC006006.1-201ENST00000603082 144 ntBASIC-0.4□□□□□ -2.47
USP42Q9H9J4 MIR3666-201ENST00000607845 111 ntBASIC-0.4□□□□□ -2.47
USP42Q9H9J4 AL132765.2-201ENST00000610812 351 ntBASIC-0.4□□□□□ -2.47
USP42Q9H9J4 RNA5SP133-201ENST00000363368 119 ntBASIC-0.41□□□□□ -2.48
USP42Q9H9J4 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.41□□□□□ -2.48
USP42Q9H9J4 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.41□□□□□ -2.48
USP42Q9H9J4 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.41□□□□□ -2.48
USP42Q9H9J4 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.41□□□□□ -2.48
USP42Q9H9J4 SNORA32.3-201ENST00000384772 121 ntBASIC-0.41□□□□□ -2.48
USP42Q9H9J4 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.41□□□□□ -2.48
USP42Q9H9J4 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.41□□□□□ -2.48
USP42Q9H9J4 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.41□□□□□ -2.48
USP42Q9H9J4 RPL21P38-201ENST00000418090 167 ntBASIC-0.41□□□□□ -2.48
USP42Q9H9J4 RNU7-79P-201ENST00000516082 62 ntBASIC-0.41□□□□□ -2.48
USP42Q9H9J4 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.41□□□□□ -2.48
USP42Q9H9J4 RNU6-897P-201ENST00000517135 105 ntBASIC-0.41□□□□□ -2.48
USP42Q9H9J4 DEFB131E-201ENST00000532329 154 ntBASIC-0.41□□□□□ -2.48
USP42Q9H9J4 AC138749.4-201ENST00000563970 127 ntBASIC-0.41□□□□□ -2.48
USP42Q9H9J4 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.42□□□□□ -2.48
USP42Q9H9J4 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.42□□□□□ -2.48
USP42Q9H9J4 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.42□□□□□ -2.48
USP42Q9H9J4 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.42□□□□□ -2.48
USP42Q9H9J4 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.42□□□□□ -2.48
USP42Q9H9J4 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.42□□□□□ -2.48
USP42Q9H9J4 MIR224-201ENST00000384889 81 ntBASIC-0.42□□□□□ -2.48
USP42Q9H9J4 MIR196A2-201ENST00000385189 110 ntBASIC-0.42□□□□□ -2.48
USP42Q9H9J4 SNORA75.1-201ENST00000391130 148 ntBASIC-0.42□□□□□ -2.48
USP42Q9H9J4 MIR1302-11-201ENST00000408051 138 ntBASIC-0.42□□□□□ -2.48
USP42Q9H9J4 MIR1302-9-201ENST00000408365 138 ntBASIC-0.42□□□□□ -2.48
USP42Q9H9J4 MIR1302-10-201ENST00000408734 138 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms