Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 RNU6-1064P-201ENST00000410626 104 ntBASIC1.44□□□□□ -2.18
CIPCQ9C0C6 AL022718.1-201ENST00000412004 84 ntBASIC1.44□□□□□ -2.18
CIPCQ9C0C6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.44□□□□□ -2.18
CIPCQ9C0C6 AC245517.4-201ENST00000448601 281 ntBASIC1.44□□□□□ -2.18
CIPCQ9C0C6 RPL39P39-201ENST00000455840 151 ntBASIC1.44□□□□□ -2.18
CIPCQ9C0C6 RNA5SP445-201ENST00000515889 115 ntBASIC1.44□□□□□ -2.18
CIPCQ9C0C6 AP003716.2-201ENST00000528260 108 ntBASIC1.44□□□□□ -2.18
CIPCQ9C0C6 MIR4422-201ENST00000581938 83 ntBASIC1.44□□□□□ -2.18
CIPCQ9C0C6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
CIPCQ9C0C6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CIPCQ9C0C6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.43□□□□□ -2.18
CIPCQ9C0C6 SNORA25.3-201ENST00000363205 127 ntBASIC1.43□□□□□ -2.18
CIPCQ9C0C6 Y_RNA.198-201ENST00000364013 98 ntBASIC1.43□□□□□ -2.18
CIPCQ9C0C6 RNU6-1056P-201ENST00000383996 107 ntBASIC1.43□□□□□ -2.18
CIPCQ9C0C6 RNU6-429P-201ENST00000384582 108 ntBASIC1.43□□□□□ -2.18
CIPCQ9C0C6 RNU6-602P-201ENST00000411155 105 ntBASIC1.43□□□□□ -2.18
CIPCQ9C0C6 RPS3AP1-201ENST00000413190 320 ntBASIC1.43□□□□□ -2.18
CIPCQ9C0C6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.43□□□□□ -2.18
CIPCQ9C0C6 AC004812.1-201ENST00000540773 146 ntBASIC1.43□□□□□ -2.18
CIPCQ9C0C6 MIR4285-201ENST00000581001 85 ntBASIC1.43□□□□□ -2.18
CIPCQ9C0C6 AL670379.3-201ENST00000605040 251 ntBASIC1.43□□□□□ -2.18
CIPCQ9C0C6 MIR8065-201ENST00000620577 100 ntBASIC1.43□□□□□ -2.18
CIPCQ9C0C6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.43□□□□□ -2.18
CIPCQ9C0C6 Y_RNA.531-201ENST00000384589 121 ntBASIC1.42□□□□□ -2.18
CIPCQ9C0C6 MIR548A3-201ENST00000385297 97 ntBASIC1.42□□□□□ -2.18
CIPCQ9C0C6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CIPCQ9C0C6 RNU6-893P-201ENST00000458841 100 ntBASIC1.42□□□□□ -2.18
CIPCQ9C0C6 Y_RNA.649-201ENST00000459077 103 ntBASIC1.42□□□□□ -2.18
CIPCQ9C0C6 AL133373.1-201ENST00000497098 94 ntBASIC1.42□□□□□ -2.18
CIPCQ9C0C6 RNU6-902P-201ENST00000517212 91 ntBASIC1.42□□□□□ -2.18
CIPCQ9C0C6 MTND5P34-201ENST00000568888 325 ntBASIC1.42□□□□□ -2.18
CIPCQ9C0C6 AL353770.2-201ENST00000620024 78 ntBASIC1.42□□□□□ -2.18
CIPCQ9C0C6 AL121890.5-201ENST00000620848 304 ntBASIC1.42□□□□□ -2.18
CIPCQ9C0C6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CIPCQ9C0C6 SNORD115-2-201ENST00000362842 82 ntBASIC1.41□□□□□ -2.18
CIPCQ9C0C6 SNORD115-20-201ENST00000365099 82 ntBASIC1.41□□□□□ -2.18
CIPCQ9C0C6 Y_RNA.470-201ENST00000384307 117 ntBASIC1.41□□□□□ -2.18
CIPCQ9C0C6 SNORD20-201ENST00000384550 80 ntBASIC1.41□□□□□ -2.18
CIPCQ9C0C6 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
CIPCQ9C0C6 RNA5SP247-201ENST00000411181 105 ntBASIC1.41□□□□□ -2.18
CIPCQ9C0C6 PRELID3BP2-201ENST00000605362 201 ntBASIC1.41□□□□□ -2.18
CIPCQ9C0C6 MIR6129-201ENST00000616087 109 ntBASIC1.41□□□□□ -2.18
CIPCQ9C0C6 Y_RNA.213-201ENST00000364178 111 ntBASIC1.4□□□□□ -2.19
CIPCQ9C0C6 RNU6-215P-201ENST00000365169 102 ntBASIC1.4□□□□□ -2.19
CIPCQ9C0C6 MIR1185-1-201ENST00000408598 86 ntBASIC1.4□□□□□ -2.19
CIPCQ9C0C6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.4□□□□□ -2.19
CIPCQ9C0C6 RNU7-113P-201ENST00000459273 62 ntBASIC1.4□□□□□ -2.19
CIPCQ9C0C6 RPS23P4-201ENST00000487908 423 ntBASIC1.4□□□□□ -2.19
CIPCQ9C0C6 AC113410.1-201ENST00000505029 247 ntBASIC1.4□□□□□ -2.19
CIPCQ9C0C6 CYP3A52P-201ENST00000563326 91 ntBASIC1.4□□□□□ -2.19
CIPCQ9C0C6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CIPCQ9C0C6 RNU6-1325P-201ENST00000364905 105 ntBASIC1.39□□□□□ -2.19
CIPCQ9C0C6 MIR548A1-201ENST00000385041 97 ntBASIC1.39□□□□□ -2.19
CIPCQ9C0C6 RNU1-98P-201ENST00000458992 160 ntBASIC1.39□□□□□ -2.19
CIPCQ9C0C6 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.39□□□□□ -2.19
CIPCQ9C0C6 RNA5SP264-201ENST00000363115 107 ntBASIC1.38□□□□□ -2.19
CIPCQ9C0C6 SNORD116-21-201ENST00000384507 92 ntBASIC1.38□□□□□ -2.19
CIPCQ9C0C6 AC244023.1-201ENST00000426884 112 ntBASIC1.38□□□□□ -2.19
CIPCQ9C0C6 AC245047.7-201ENST00000440265 293 ntBASIC1.38□□□□□ -2.19
CIPCQ9C0C6 AC242498.1-201ENST00000604134 111 ntBASIC1.38□□□□□ -2.19
CIPCQ9C0C6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.38□□□□□ -2.19
CIPCQ9C0C6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.38□□□□□ -2.19
CIPCQ9C0C6 Y_RNA.35-201ENST00000362601 101 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 Y_RNA.354-201ENST00000365448 111 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 SNORD38B-201ENST00000384690 67 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 RNU6-1054P-201ENST00000411293 104 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 RNU1-123P-201ENST00000458950 160 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 MIR1270-201ENST00000459320 83 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 RNU6-970P-201ENST00000516312 107 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 RNA5SP61-201ENST00000516453 100 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 RNU6-589P-201ENST00000516485 107 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 RN7SKP88-201ENST00000516847 250 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 MIR3163-201ENST00000581592 73 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 MIR548AE2-201ENST00000583456 67 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 MIR6078-201ENST00000611069 100 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 7SK.8-201ENST00000612110 250 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 7SK.11-201ENST00000615477 250 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 7SK.13-201ENST00000622040 250 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 SNORD38B-202ENST00000625943 69 ntBASIC1.37□□□□□ -2.19
CIPCQ9C0C6 MIR103A2-201ENST00000362154 78 ntBASIC1.36□□□□□ -2.19
CIPCQ9C0C6 RNU6-392P-201ENST00000364926 101 ntBASIC1.36□□□□□ -2.19
CIPCQ9C0C6 RNU6-880P-201ENST00000384526 107 ntBASIC1.36□□□□□ -2.19
CIPCQ9C0C6 SNORD12C-201ENST00000386307 89 ntBASIC1.36□□□□□ -2.19
CIPCQ9C0C6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.36□□□□□ -2.19
CIPCQ9C0C6 AC048334.1-201ENST00000477975 159 ntBASIC1.36□□□□□ -2.19
CIPCQ9C0C6 RNA5SP33-201ENST00000516687 98 ntBASIC1.36□□□□□ -2.19
CIPCQ9C0C6 AC007012.1-201ENST00000567192 175 ntBASIC1.36□□□□□ -2.19
CIPCQ9C0C6 MIR8070-201ENST00000616510 88 ntBASIC1.36□□□□□ -2.19
CIPCQ9C0C6 MIR6516-201ENST00000630554 81 ntBASIC1.36□□□□□ -2.19
CIPCQ9C0C6 RNY4P6-201ENST00000363667 96 ntBASIC1.35□□□□□ -2.19
CIPCQ9C0C6 Y_RNA.299-201ENST00000364973 94 ntBASIC1.35□□□□□ -2.19
CIPCQ9C0C6 RNU6-396P-201ENST00000365369 105 ntBASIC1.35□□□□□ -2.19
CIPCQ9C0C6 RNU6-342P-201ENST00000384521 104 ntBASIC1.35□□□□□ -2.19
CIPCQ9C0C6 Y_RNA.549-201ENST00000384657 102 ntBASIC1.35□□□□□ -2.19
CIPCQ9C0C6 MIR548D2-201ENST00000384955 97 ntBASIC1.35□□□□□ -2.19
CIPCQ9C0C6 MIR759-201ENST00000390224 91 ntBASIC1.35□□□□□ -2.19
CIPCQ9C0C6 RNU4-69P-201ENST00000410677 143 ntBASIC1.35□□□□□ -2.19
CIPCQ9C0C6 RNU7-6P-201ENST00000516845 62 ntBASIC1.35□□□□□ -2.19
CIPCQ9C0C6 RNU11-2P-201ENST00000516898 142 ntBASIC1.35□□□□□ -2.19
CIPCQ9C0C6 AC087741.2-201ENST00000619415 172 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 245.6 ms