Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.04□□□□□ -2.24
PKP2Q99959 AC245047.7-201ENST00000440265 293 ntBASIC1.04□□□□□ -2.24
PKP2Q99959 TMSB4XP3-201ENST00000445144 114 ntBASIC1.04□□□□□ -2.24
PKP2Q99959 snoU13.16-201ENST00000459350 104 ntBASIC1.04□□□□□ -2.24
PKP2Q99959 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.04□□□□□ -2.24
PKP2Q99959 MIR3121-201ENST00000579680 77 ntBASIC1.04□□□□□ -2.24
PKP2Q99959 U7.2-201ENST00000607576 63 ntBASIC1.04□□□□□ -2.24
PKP2Q99959 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.04□□□□□ -2.24
PKP2Q99959 AC012676.2-201ENST00000619258 186 ntBASIC1.04□□□□□ -2.24
PKP2Q99959 RNY1P4-201ENST00000384595 115 ntBASIC1.03□□□□□ -2.24
PKP2Q99959 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.03□□□□□ -2.24
PKP2Q99959 MRPL35P3-201ENST00000421557 364 ntBASIC1.03□□□□□ -2.24
PKP2Q99959 UBL5P1-201ENST00000507979 193 ntBASIC1.03□□□□□ -2.24
PKP2Q99959 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.03□□□□□ -2.24
PKP2Q99959 Y_RNA.692-201ENST00000516627 105 ntBASIC1.03□□□□□ -2.24
PKP2Q99959 MIR548AO-201ENST00000579992 96 ntBASIC1.03□□□□□ -2.24
PKP2Q99959 MIR3910-1-201ENST00000580936 111 ntBASIC1.03□□□□□ -2.24
PKP2Q99959 TUG1_4.1-201ENST00000619464 181 ntBASIC1.03□□□□□ -2.24
PKP2Q99959 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.03□□□□□ -2.24
PKP2Q99959 MIR302B-201ENST00000362188 73 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 RNU6-349P-201ENST00000362402 107 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 Y_RNA.280-201ENST00000364765 112 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 Y_RNA.294-201ENST00000364916 102 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 RNY1P6-201ENST00000384193 109 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 MIR19B1-201ENST00000384829 87 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 SNORD12-201ENST00000391002 90 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 RNU6-1190P-201ENST00000410811 104 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 RNU4-61P-201ENST00000411243 107 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 RNU7-45P-201ENST00000459460 63 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 AP003716.2-201ENST00000528260 108 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 AL020996.3-201ENST00000606617 222 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 MIR8055-201ENST00000610739 97 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 AC011603.4-201ENST00000611325 277 ntBASIC1.02□□□□□ -2.25
PKP2Q99959 AL391516.1-201ENST00000554380 2449 ntBASIC1.01□□□□□ -2.25
PKP2Q99959 SNORA25.3-201ENST00000363205 127 ntBASIC1.01□□□□□ -2.25
PKP2Q99959 Y_RNA.114-201ENST00000363265 113 ntBASIC1.01□□□□□ -2.25
PKP2Q99959 Y_RNA.178-201ENST00000363832 102 ntBASIC1.01□□□□□ -2.25
PKP2Q99959 SNORA26.6-201ENST00000391256 115 ntBASIC1.01□□□□□ -2.25
PKP2Q99959 MIR1302-7-201ENST00000408841 72 ntBASIC1.01□□□□□ -2.25
PKP2Q99959 AC063976.4-201ENST00000421971 163 ntBASIC1.01□□□□□ -2.25
PKP2Q99959 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.01□□□□□ -2.25
PKP2Q99959 RNU6-113P-201ENST00000516653 101 ntBASIC1.01□□□□□ -2.25
PKP2Q99959 Y_RNA.757-201ENST00000578934 114 ntBASIC1.01□□□□□ -2.25
PKP2Q99959 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1□□□□□ -2.25
PKP2Q99959 RNU6-81P-201ENST00000365608 104 ntBASIC1□□□□□ -2.25
PKP2Q99959 RNU6-1319P-201ENST00000390855 104 ntBASIC1□□□□□ -2.25
PKP2Q99959 RNU6-747P-201ENST00000390928 104 ntBASIC1□□□□□ -2.25
PKP2Q99959 RNU6-241P-201ENST00000391148 104 ntBASIC1□□□□□ -2.25
PKP2Q99959 RNU6-177P-201ENST00000411257 104 ntBASIC1□□□□□ -2.25
PKP2Q99959 HMGN1P33-201ENST00000432945 451 ntBASIC1□□□□□ -2.25
PKP2Q99959 RNU5E-3P-201ENST00000515913 68 ntBASIC1□□□□□ -2.25
PKP2Q99959 RNA5SP436-201ENST00000516020 115 ntBASIC1□□□□□ -2.25
PKP2Q99959 RNU6-971P-201ENST00000516920 106 ntBASIC1□□□□□ -2.25
PKP2Q99959 MIR4661-201ENST00000582720 75 ntBASIC1□□□□□ -2.25
PKP2Q99959 RN7SL793P-201ENST00000583259 296 ntBASIC1□□□□□ -2.25
PKP2Q99959 AC108081.1-201ENST00000604358 221 ntBASIC1□□□□□ -2.25
PKP2Q99959 AC021613.1-201ENST00000623880 111 ntBASIC1□□□□□ -2.25
PKP2Q99959 Z97988.1-201ENST00000637697 135 ntBASIC1□□□□□ -2.25
PKP2Q99959 RNA5SP264-201ENST00000363115 107 ntBASIC0.99□□□□□ -2.25
PKP2Q99959 RNU4-16P-201ENST00000364737 141 ntBASIC0.99□□□□□ -2.25
PKP2Q99959 RNU6-690P-201ENST00000365242 106 ntBASIC0.99□□□□□ -2.25
PKP2Q99959 MIR539-201ENST00000365690 78 ntBASIC0.99□□□□□ -2.25
PKP2Q99959 MIR216A-201ENST00000385063 110 ntBASIC0.99□□□□□ -2.25
PKP2Q99959 MIR1185-1-201ENST00000408598 86 ntBASIC0.99□□□□□ -2.25
PKP2Q99959 AC090844.1-201ENST00000422019 156 ntBASIC0.99□□□□□ -2.25
PKP2Q99959 AC002429.1-201ENST00000437672 148 ntBASIC0.99□□□□□ -2.25
PKP2Q99959 AL158147.1-201ENST00000443970 75 ntBASIC0.99□□□□□ -2.25
PKP2Q99959 RNU6-1211P-201ENST00000459179 105 ntBASIC0.99□□□□□ -2.25
PKP2Q99959 SNORD79.1-201ENST00000516069 84 ntBASIC0.99□□□□□ -2.25
PKP2Q99959 RNU6-240P-201ENST00000516098 97 ntBASIC0.99□□□□□ -2.25
PKP2Q99959 RNU6-406P-201ENST00000516470 107 ntBASIC0.99□□□□□ -2.25
PKP2Q99959 PRELID3BP2-201ENST00000605362 201 ntBASIC0.99□□□□□ -2.25
PKP2Q99959 MIR6717-201ENST00000622747 73 ntBASIC0.99□□□□□ -2.25
PKP2Q99959 AC132825.6-201ENST00000638861 357 ntBASIC0.99□□□□□ -2.25
PKP2Q99959 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
PKP2Q99959 RNU6-647P-201ENST00000364243 107 ntBASIC0.98□□□□□ -2.25
PKP2Q99959 SNORA1.1-201ENST00000364671 133 ntBASIC0.98□□□□□ -2.25
PKP2Q99959 Y_RNA.366-201ENST00000365540 102 ntBASIC0.98□□□□□ -2.25
PKP2Q99959 SNORA80D-201ENST00000384488 135 ntBASIC0.98□□□□□ -2.25
PKP2Q99959 RNU6-959P-201ENST00000384671 107 ntBASIC0.98□□□□□ -2.25
PKP2Q99959 RNA5SP261-201ENST00000410536 106 ntBASIC0.98□□□□□ -2.25
PKP2Q99959 RNU6-789P-201ENST00000517105 102 ntBASIC0.98□□□□□ -2.25
PKP2Q99959 AC133485.4-201ENST00000561835 220 ntBASIC0.98□□□□□ -2.25
PKP2Q99959 AC138907.4-201ENST00000570107 226 ntBASIC0.98□□□□□ -2.25
PKP2Q99959 MIR3152-201ENST00000579801 74 ntBASIC0.98□□□□□ -2.25
PKP2Q99959 SNORD114-21-201ENST00000606412 72 ntBASIC0.98□□□□□ -2.25
PKP2Q99959 MIR6841-201ENST00000637129 72 ntBASIC0.98□□□□□ -2.25
PKP2Q99959 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
PKP2Q99959 MIR103A2-201ENST00000362154 78 ntBASIC0.97□□□□□ -2.25
PKP2Q99959 RNU6-235P-201ENST00000362644 107 ntBASIC0.97□□□□□ -2.25
PKP2Q99959 Y_RNA.218-201ENST00000364218 104 ntBASIC0.97□□□□□ -2.25
PKP2Q99959 Y_RNA.430-201ENST00000384081 110 ntBASIC0.97□□□□□ -2.25
PKP2Q99959 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.97□□□□□ -2.25
PKP2Q99959 RNA5SP144-201ENST00000410846 116 ntBASIC0.97□□□□□ -2.25
PKP2Q99959 RNU6-602P-201ENST00000411155 105 ntBASIC0.97□□□□□ -2.25
PKP2Q99959 RPS3AP1-201ENST00000413190 320 ntBASIC0.97□□□□□ -2.25
PKP2Q99959 IGKV1-22-201ENST00000524313 326 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms