Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.61□□□□□ -2.99
VPS13AQ96RL7 Y_RNA.22-201ENST00000362492 102 ntBASIC-3.62□□□□□ -2.99
VPS13AQ96RL7 SNORA20B-201ENST00000384220 132 ntBASIC-3.62□□□□□ -2.99
VPS13AQ96RL7 SNORA27-201ENST00000384323 126 ntBASIC-3.62□□□□□ -2.99
VPS13AQ96RL7 TPTE2P1-204ENST00000435256 593 ntBASIC-3.62□□□□□ -2.99
VPS13AQ96RL7 Y_RNA.159-201ENST00000363674 87 ntBASIC-3.63□□□□□ -2.99
VPS13AQ96RL7 RNU6-458P-201ENST00000384179 107 ntBASIC-3.63□□□□□ -2.99
VPS13AQ96RL7 RNU6-1000P-201ENST00000391066 106 ntBASIC-3.63□□□□□ -2.99
VPS13AQ96RL7 AL031003.1-201ENST00000404229 172 ntBASIC-3.63□□□□□ -2.99
VPS13AQ96RL7 U6.58-201ENST00000613107 107 ntBASIC-3.63□□□□□ -2.99
VPS13AQ96RL7 RNU6-309P-201ENST00000364573 106 ntBASIC-3.63□□□□□ -2.99
VPS13AQ96RL7 NDUFA5P7-201ENST00000452914 242 ntBASIC-3.63□□□□□ -2.99
VPS13AQ96RL7 AL118558.2-201ENST00000556294 238 ntBASIC-3.63□□□□□ -2.99
VPS13AQ96RL7 Y_RNA.404-201ENST00000383978 102 ntBASIC-3.64□□□□□ -2.99
VPS13AQ96RL7 RNU6-995P-201ENST00000391244 107 ntBASIC-3.64□□□□□ -2.99
VPS13AQ96RL7 MIR15A-201ENST00000607334 83 ntBASIC-3.64□□□□□ -2.99
VPS13AQ96RL7 SNORD60-201ENST00000383903 83 ntBASIC-3.65□□□□□ -2.99
VPS13AQ96RL7 MTND1P2-201ENST00000430604 821 ntBASIC-3.65□□□□□ -2.99
VPS13AQ96RL7 SNORA27.1-201ENST00000362604 124 ntBASIC-3.65□□□□□ -2.99
VPS13AQ96RL7 MTCYBP4-201ENST00000401524 249 ntBASIC-3.65□□□□□ -2.99
VPS13AQ96RL7 AL137792.2-201ENST00000443484 235 ntBASIC-3.65□□□□□ -2.99
VPS13AQ96RL7 MIR302B-201ENST00000362188 73 ntBASIC-3.66□□□□□ -3
VPS13AQ96RL7 SNORD116-25-201ENST00000516517 92 ntBASIC-3.66□□□□□ -3
VPS13AQ96RL7 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-3.66□□□□□ -3
VPS13AQ96RL7 MIR581-201ENST00000384895 96 ntBASIC-3.66□□□□□ -3
VPS13AQ96RL7 RNU6-1203P-201ENST00000410703 110 ntBASIC-3.66□□□□□ -3
VPS13AQ96RL7 MIR3170-201ENST00000582699 77 ntBASIC-3.66□□□□□ -3
VPS13AQ96RL7 AC099654.12-201ENST00000639868 649 ntBASIC-3.66□□□□□ -3
VPS13AQ96RL7 RNU6-117P-201ENST00000365415 107 ntBASIC-3.67□□□□□ -3
VPS13AQ96RL7 DLGAP5P1-201ENST00000430307 464 ntBASIC-3.67□□□□□ -3
VPS13AQ96RL7 AC090615.1-201ENST00000577519 154 ntBASIC-3.67□□□□□ -3
VPS13AQ96RL7 SNORA43.4-201ENST00000629559 138 ntBASIC-3.67□□□□□ -3
VPS13AQ96RL7 RNU6-433P-201ENST00000363216 104 ntBASIC-3.67□□□□□ -3
VPS13AQ96RL7 AL161932.1-201ENST00000437408 146 ntBASIC-3.67□□□□□ -3
VPS13AQ96RL7 RNU6-916P-201ENST00000516088 109 ntBASIC-3.67□□□□□ -3
VPS13AQ96RL7 AC005345.1-201ENST00000431868 217 ntBASIC-3.68□□□□□ -3
VPS13AQ96RL7 AC107399.1-201ENST00000451226 265 ntBASIC-3.68□□□□□ -3
VPS13AQ96RL7 AC107905.1-201ENST00000616204 426 ntBASIC-3.68□□□□□ -3
VPS13AQ96RL7 AC018710.1-201ENST00000506509 158 ntBASIC-3.68□□□□□ -3
VPS13AQ96RL7 AC072039.2-201ENST00000608883 439 ntBASIC-3.68□□□□□ -3
VPS13AQ96RL7 RNU6-832P-201ENST00000363319 107 ntBASIC-3.69□□□□□ -3
VPS13AQ96RL7 RNU6-1316P-201ENST00000384242 108 ntBASIC-3.69□□□□□ -3
VPS13AQ96RL7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-3.69□□□□□ -3
VPS13AQ96RL7 MIR3684-201ENST00000579779 74 ntBASIC-3.69□□□□□ -3
VPS13AQ96RL7 U6.42-201ENST00000618440 107 ntBASIC-3.69□□□□□ -3
VPS13AQ96RL7 RNU6-114P-201ENST00000384704 105 ntBASIC-3.69□□□□□ -3
VPS13AQ96RL7 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.69□□□□□ -3
VPS13AQ96RL7 Y_RNA.384-201ENST00000383909 102 ntBASIC-3.69□□□□□ -3
VPS13AQ96RL7 MIR320B2-201ENST00000408479 138 ntBASIC-3.7□□□□□ -3
VPS13AQ96RL7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-3.7□□□□□ -3
VPS13AQ96RL7 MTATP6P21-201ENST00000440681 189 ntBASIC-3.7□□□□□ -3
VPS13AQ96RL7 AL033528.1-201ENST00000453780 140 ntBASIC-3.7□□□□□ -3
VPS13AQ96RL7 AC022616.4-201ENST00000522985 181 ntBASIC-3.7□□□□□ -3
VPS13AQ96RL7 RNU6-757P-201ENST00000410334 100 ntBASIC-3.71□□□□□ -3
VPS13AQ96RL7 MTND2P18-201ENST00000419962 1030 ntBASIC-3.71□□□□□ -3
VPS13AQ96RL7 AL021707.8-201ENST00000609428 183 ntBASIC-3.71□□□□□ -3
VPS13AQ96RL7 RNU6-692P-201ENST00000384496 107 ntBASIC-3.71□□□□□ -3
VPS13AQ96RL7 RNU6-1086P-201ENST00000410930 100 ntBASIC-3.71□□□□□ -3
VPS13AQ96RL7 RNU6-781P-201ENST00000516377 101 ntBASIC-3.71□□□□□ -3
VPS13AQ96RL7 RNU6-407P-201ENST00000365280 104 ntBASIC-3.71□□□□□ -3
VPS13AQ96RL7 MIR548N-201ENST00000408742 75 ntBASIC-3.71□□□□□ -3
VPS13AQ96RL7 AC139453.2-201ENST00000487255 133 ntBASIC-3.71□□□□□ -3
VPS13AQ96RL7 AL133153.1-201ENST00000557756 303 ntBASIC-3.71□□□□□ -3
VPS13AQ96RL7 SNORA27.2-201ENST00000363365 126 ntBASIC-3.72□□□□□ -3
VPS13AQ96RL7 Y_RNA.401-201ENST00000383965 117 ntBASIC-3.72□□□□□ -3
VPS13AQ96RL7 MIR521-2-201ENST00000384818 87 ntBASIC-3.72□□□□□ -3
VPS13AQ96RL7 RNU7-96P-201ENST00000459535 64 ntBASIC-3.72□□□□□ -3
VPS13AQ96RL7 JPX_2.1-201ENST00000614161 69 ntBASIC-3.72□□□□□ -3
VPS13AQ96RL7 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-3.72□□□□□ -3.01
VPS13AQ96RL7 Y_RNA.241-201ENST00000364470 117 ntBASIC-3.73□□□□□ -3.01
VPS13AQ96RL7 SNORD87-201ENST00000364849 89 ntBASIC-3.73□□□□□ -3.01
VPS13AQ96RL7 RNU2-38P-201ENST00000410856 79 ntBASIC-3.73□□□□□ -3.01
VPS13AQ96RL7 SNORA72-201ENST00000384339 132 ntBASIC-3.73□□□□□ -3.01
VPS13AQ96RL7 Y_RNA.27-201ENST00000362540 103 ntBASIC-3.73□□□□□ -3.01
VPS13AQ96RL7 RNU6-359P-201ENST00000365466 108 ntBASIC-3.73□□□□□ -3.01
VPS13AQ96RL7 SEPT14P8-201ENST00000508026 178 ntBASIC-3.73□□□□□ -3.01
VPS13AQ96RL7 RNA5SP147-201ENST00000516493 109 ntBASIC-3.73□□□□□ -3.01
VPS13AQ96RL7 SNORD114-10-201ENST00000363409 72 ntBASIC-3.74□□□□□ -3.01
VPS13AQ96RL7 MIR217-201ENST00000384817 110 ntBASIC-3.74□□□□□ -3.01
VPS13AQ96RL7 RNU6-530P-201ENST00000391180 107 ntBASIC-3.74□□□□□ -3.01
VPS13AQ96RL7 MTND3P16-201ENST00000452205 344 ntBASIC-3.74□□□□□ -3.01
VPS13AQ96RL7 Y_RNA.677-201ENST00000516401 85 ntBASIC-3.74□□□□□ -3.01
VPS13AQ96RL7 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.74□□□□□ -3.01
VPS13AQ96RL7 U6.101-201ENST00000637707 76 ntBASIC-3.74□□□□□ -3.01
VPS13AQ96RL7 AL138825.1-201ENST00000618587 192 ntBASIC-3.75□□□□□ -3.01
VPS13AQ96RL7 RNU6-874P-201ENST00000362390 105 ntBASIC-3.75□□□□□ -3.01
VPS13AQ96RL7 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.75□□□□□ -3.01
VPS13AQ96RL7 RNU6-990P-201ENST00000364385 104 ntBASIC-3.75□□□□□ -3.01
VPS13AQ96RL7 SNORA20.2-201ENST00000383922 131 ntBASIC-3.75□□□□□ -3.01
VPS13AQ96RL7 RNU2-28P-201ENST00000410457 189 ntBASIC-3.75□□□□□ -3.01
VPS13AQ96RL7 RNU6-651P-201ENST00000411040 105 ntBASIC-3.75□□□□□ -3.01
VPS13AQ96RL7 MIR342-201ENST00000362212 99 ntBASIC-3.75□□□□□ -3.01
VPS13AQ96RL7 RNU6-495P-201ENST00000362995 107 ntBASIC-3.75□□□□□ -3.01
VPS13AQ96RL7 RNU6-518P-201ENST00000516056 96 ntBASIC-3.75□□□□□ -3.01
VPS13AQ96RL7 RNU6-664P-201ENST00000362381 107 ntBASIC-3.76□□□□□ -3.01
VPS13AQ96RL7 RNU6-170P-201ENST00000362832 104 ntBASIC-3.76□□□□□ -3.01
VPS13AQ96RL7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-3.76□□□□□ -3.01
VPS13AQ96RL7 AC093899.1-201ENST00000457984 376 ntBASIC-3.76□□□□□ -3.01
VPS13AQ96RL7 RNU7-106P-201ENST00000459514 67 ntBASIC-3.76□□□□□ -3.01
VPS13AQ96RL7 MIR203A-201ENST00000384836 110 ntBASIC-3.77□□□□□ -3.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms