Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 Y_RNA.430-201ENST00000384081 110 ntBASIC1.43□□□□□ -2.18
SNX18Q96RF0 SNORD116-21-201ENST00000384507 92 ntBASIC1.43□□□□□ -2.18
SNX18Q96RF0 MIR759-201ENST00000390224 91 ntBASIC1.43□□□□□ -2.18
SNX18Q96RF0 MIR1287-201ENST00000408492 90 ntBASIC1.43□□□□□ -2.18
SNX18Q96RF0 RNU6-893P-201ENST00000458841 100 ntBASIC1.43□□□□□ -2.18
SNX18Q96RF0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.43□□□□□ -2.18
SNX18Q96RF0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SNX18Q96RF0 Y_RNA.470-201ENST00000384307 117 ntBASIC1.42□□□□□ -2.18
SNX18Q96RF0 MIR320A-201ENST00000385302 82 ntBASIC1.42□□□□□ -2.18
SNX18Q96RF0 RNU6-602P-201ENST00000411155 105 ntBASIC1.42□□□□□ -2.18
SNX18Q96RF0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.42□□□□□ -2.18
SNX18Q96RF0 RN7SKP88-201ENST00000516847 250 ntBASIC1.42□□□□□ -2.18
SNX18Q96RF0 RNU6-165P-201ENST00000517170 99 ntBASIC1.42□□□□□ -2.18
SNX18Q96RF0 7SK.8-201ENST00000612110 250 ntBASIC1.42□□□□□ -2.18
SNX18Q96RF0 7SK.11-201ENST00000615477 250 ntBASIC1.42□□□□□ -2.18
SNX18Q96RF0 7SK.13-201ENST00000622040 250 ntBASIC1.42□□□□□ -2.18
SNX18Q96RF0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.41□□□□□ -2.18
SNX18Q96RF0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.41□□□□□ -2.18
SNX18Q96RF0 Y_RNA.35-201ENST00000362601 101 ntBASIC1.41□□□□□ -2.18
SNX18Q96RF0 MIR1302-7-201ENST00000408841 72 ntBASIC1.41□□□□□ -2.18
SNX18Q96RF0 RNU4-62P-201ENST00000410125 130 ntBASIC1.41□□□□□ -2.18
SNX18Q96RF0 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
SNX18Q96RF0 AC245047.7-201ENST00000440265 293 ntBASIC1.41□□□□□ -2.18
SNX18Q96RF0 AL133373.1-201ENST00000497098 94 ntBASIC1.41□□□□□ -2.18
SNX18Q96RF0 AC113410.1-201ENST00000505029 247 ntBASIC1.41□□□□□ -2.18
SNX18Q96RF0 RNA5SP33-201ENST00000516687 98 ntBASIC1.41□□□□□ -2.18
SNX18Q96RF0 MIR4303-201ENST00000581299 66 ntBASIC1.41□□□□□ -2.18
SNX18Q96RF0 MIR4781-201ENST00000585250 76 ntBASIC1.41□□□□□ -2.18
SNX18Q96RF0 snoU13.31-201ENST00000607291 104 ntBASIC1.41□□□□□ -2.18
SNX18Q96RF0 SNORD38B-201ENST00000384690 67 ntBASIC1.4□□□□□ -2.19
SNX18Q96RF0 BTF3P4-201ENST00000418852 495 ntBASIC1.4□□□□□ -2.19
SNX18Q96RF0 RPS23P4-201ENST00000487908 423 ntBASIC1.4□□□□□ -2.19
SNX18Q96RF0 RNU6-919P-201ENST00000516731 104 ntBASIC1.4□□□□□ -2.19
SNX18Q96RF0 RNU7-6P-201ENST00000516845 62 ntBASIC1.4□□□□□ -2.19
SNX18Q96RF0 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.4□□□□□ -2.19
SNX18Q96RF0 AC007012.1-201ENST00000567192 175 ntBASIC1.4□□□□□ -2.19
SNX18Q96RF0 PRELID3BP2-201ENST00000605362 201 ntBASIC1.4□□□□□ -2.19
SNX18Q96RF0 MIR7111-201ENST00000619751 72 ntBASIC1.4□□□□□ -2.19
SNX18Q96RF0 MIR8065-201ENST00000620577 100 ntBASIC1.4□□□□□ -2.19
SNX18Q96RF0 SNORD38B-202ENST00000625943 69 ntBASIC1.4□□□□□ -2.19
SNX18Q96RF0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.4□□□□□ -2.19
SNX18Q96RF0 AL161722.3-201ENST00000605789 2983 ntBASIC1.39□□□□□ -2.19
SNX18Q96RF0 SNORA32-201ENST00000384072 121 ntBASIC1.39□□□□□ -2.19
SNX18Q96RF0 RNU6-880P-201ENST00000384526 107 ntBASIC1.39□□□□□ -2.19
SNX18Q96RF0 SNORA67.5-201ENST00000391036 107 ntBASIC1.39□□□□□ -2.19
SNX18Q96RF0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.39□□□□□ -2.19
SNX18Q96RF0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.39□□□□□ -2.19
SNX18Q96RF0 SNORD53B-201ENST00000577887 78 ntBASIC1.39□□□□□ -2.19
SNX18Q96RF0 MIR3163-201ENST00000581592 73 ntBASIC1.39□□□□□ -2.19
SNX18Q96RF0 MIR548AE2-201ENST00000583456 67 ntBASIC1.39□□□□□ -2.19
SNX18Q96RF0 BX248123.2-201ENST00000606318 124 ntBASIC1.39□□□□□ -2.19
SNX18Q96RF0 MIR103A2-201ENST00000362154 78 ntBASIC1.38□□□□□ -2.19
SNX18Q96RF0 SNORD115-2-201ENST00000362842 82 ntBASIC1.38□□□□□ -2.19
SNX18Q96RF0 RNA5SP264-201ENST00000363115 107 ntBASIC1.38□□□□□ -2.19
SNX18Q96RF0 Y_RNA.118-201ENST00000363300 101 ntBASIC1.38□□□□□ -2.19
SNX18Q96RF0 RNY4P6-201ENST00000363667 96 ntBASIC1.38□□□□□ -2.19
SNX18Q96RF0 SNORD115-20-201ENST00000365099 82 ntBASIC1.38□□□□□ -2.19
SNX18Q96RF0 Y_RNA.354-201ENST00000365448 111 ntBASIC1.38□□□□□ -2.19
SNX18Q96RF0 RNU6-44P-201ENST00000384045 107 ntBASIC1.38□□□□□ -2.19
SNX18Q96RF0 Y_RNA.549-201ENST00000384657 102 ntBASIC1.38□□□□□ -2.19
SNX18Q96RF0 MIR517C-201ENST00000385103 95 ntBASIC1.38□□□□□ -2.19
SNX18Q96RF0 SNORD12C-201ENST00000386307 89 ntBASIC1.38□□□□□ -2.19
SNX18Q96RF0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.38□□□□□ -2.19
SNX18Q96RF0 MIR1185-1-201ENST00000408598 86 ntBASIC1.38□□□□□ -2.19
SNX18Q96RF0 AL035461.1-201ENST00000421490 332 ntBASIC1.38□□□□□ -2.19
SNX18Q96RF0 RNU6-589P-201ENST00000516485 107 ntBASIC1.38□□□□□ -2.19
SNX18Q96RF0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SNX18Q96RF0 RNU1-42P-201ENST00000364033 160 ntBASIC1.37□□□□□ -2.19
SNX18Q96RF0 RNU6-396P-201ENST00000365369 105 ntBASIC1.37□□□□□ -2.19
SNX18Q96RF0 RNU6-342P-201ENST00000384521 104 ntBASIC1.37□□□□□ -2.19
SNX18Q96RF0 RNU4-69P-201ENST00000410677 143 ntBASIC1.37□□□□□ -2.19
SNX18Q96RF0 AC244023.1-201ENST00000426884 112 ntBASIC1.37□□□□□ -2.19
SNX18Q96RF0 Y_RNA.709-201ENST00000516952 92 ntBASIC1.37□□□□□ -2.19
SNX18Q96RF0 AC242498.1-201ENST00000604134 111 ntBASIC1.37□□□□□ -2.19
SNX18Q96RF0 AL512598.1-201ENST00000610158 273 ntBASIC1.37□□□□□ -2.19
SNX18Q96RF0 AL035470.1-201ENST00000622571 220 ntBASIC1.37□□□□□ -2.19
SNX18Q96RF0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.37□□□□□ -2.19
SNX18Q96RF0 RNY1P10-201ENST00000363268 113 ntBASIC1.36□□□□□ -2.19
SNX18Q96RF0 SNORA63.5-201ENST00000363548 123 ntBASIC1.36□□□□□ -2.19
SNX18Q96RF0 Y_RNA.299-201ENST00000364973 94 ntBASIC1.36□□□□□ -2.19
SNX18Q96RF0 Y_RNA.344-201ENST00000365381 112 ntBASIC1.36□□□□□ -2.19
SNX18Q96RF0 Y_RNA.362-201ENST00000365518 110 ntBASIC1.36□□□□□ -2.19
SNX18Q96RF0 SNORA18-201ENST00000384416 132 ntBASIC1.36□□□□□ -2.19
SNX18Q96RF0 RNU6-1237P-201ENST00000384777 107 ntBASIC1.36□□□□□ -2.19
SNX18Q96RF0 MIR548D2-201ENST00000384955 97 ntBASIC1.36□□□□□ -2.19
SNX18Q96RF0 RNY4P18-201ENST00000391107 89 ntBASIC1.36□□□□□ -2.19
SNX18Q96RF0 AC048334.1-201ENST00000477975 159 ntBASIC1.36□□□□□ -2.19
SNX18Q96RF0 AP003716.2-201ENST00000528260 108 ntBASIC1.36□□□□□ -2.19
SNX18Q96RF0 Y_RNA.508-201ENST00000384502 114 ntBASIC1.35□□□□□ -2.19
SNX18Q96RF0 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
SNX18Q96RF0 RNU6-205P-201ENST00000390858 107 ntBASIC1.35□□□□□ -2.19
SNX18Q96RF0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.35□□□□□ -2.19
SNX18Q96RF0 AP1B1P2-201ENST00000416196 106 ntBASIC1.35□□□□□ -2.19
SNX18Q96RF0 MIR1270-201ENST00000459320 83 ntBASIC1.35□□□□□ -2.19
SNX18Q96RF0 AC087741.2-201ENST00000619415 172 ntBASIC1.35□□□□□ -2.19
SNX18Q96RF0 MIR6516-201ENST00000630554 81 ntBASIC1.35□□□□□ -2.19
SNX18Q96RF0 SNORA63.4-201ENST00000362763 126 ntBASIC1.34□□□□□ -2.19
SNX18Q96RF0 Y_RNA.81-201ENST00000362997 102 ntBASIC1.34□□□□□ -2.19
SNX18Q96RF0 RNU6-654P-201ENST00000364373 107 ntBASIC1.34□□□□□ -2.19
SNX18Q96RF0 SNORA22-201ENST00000383907 134 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms