Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 U8.15-201ENST00000390947 134 ntBASIC2.72□□□□□ -1.97
CCDC85AQ96PX6 RPS29P28-201ENST00000446439 141 ntBASIC2.72□□□□□ -1.97
CCDC85AQ96PX6 RPL39P39-201ENST00000455840 151 ntBASIC2.72□□□□□ -1.97
CCDC85AQ96PX6 RNU6-917P-201ENST00000516294 104 ntBASIC2.72□□□□□ -1.97
CCDC85AQ96PX6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC85AQ96PX6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
CCDC85AQ96PX6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC85AQ96PX6 SNORA16B-201ENST00000364674 135 ntBASIC2.71□□□□□ -1.98
CCDC85AQ96PX6 SNORD58A-201ENST00000383875 65 ntBASIC2.71□□□□□ -1.98
CCDC85AQ96PX6 AL591806.2-201ENST00000433122 173 ntBASIC2.71□□□□□ -1.98
CCDC85AQ96PX6 AC055731.1-201ENST00000474387 401 ntBASIC2.71□□□□□ -1.98
CCDC85AQ96PX6 RNU7-79P-201ENST00000516082 62 ntBASIC2.71□□□□□ -1.98
CCDC85AQ96PX6 SNORA31.11-201ENST00000516528 139 ntBASIC2.71□□□□□ -1.98
CCDC85AQ96PX6 RNU6-1006P-201ENST00000516998 103 ntBASIC2.71□□□□□ -1.98
CCDC85AQ96PX6 RNU2-19P-201ENST00000517288 84 ntBASIC2.71□□□□□ -1.98
CCDC85AQ96PX6 MIR4769-201ENST00000584126 77 ntBASIC2.71□□□□□ -1.98
CCDC85AQ96PX6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CCDC85AQ96PX6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CCDC85AQ96PX6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC85AQ96PX6 DEFA7P-201ENST00000382676 285 ntBASIC2.7□□□□□ -1.98
CCDC85AQ96PX6 SNORD38.2-201ENST00000384470 69 ntBASIC2.7□□□□□ -1.98
CCDC85AQ96PX6 SNORD38B-201ENST00000384690 67 ntBASIC2.7□□□□□ -1.98
CCDC85AQ96PX6 MIR17-201ENST00000385012 84 ntBASIC2.7□□□□□ -1.98
CCDC85AQ96PX6 UBL5P1-201ENST00000507979 193 ntBASIC2.7□□□□□ -1.98
CCDC85AQ96PX6 DEFB122-202ENST00000569013 197 ntBASIC2.7□□□□□ -1.98
CCDC85AQ96PX6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC85AQ96PX6 MIR3935-201ENST00000583472 104 ntBASIC2.7□□□□□ -1.98
CCDC85AQ96PX6 SNORD38B-202ENST00000625943 69 ntBASIC2.7□□□□□ -1.98
CCDC85AQ96PX6 MIR4251-201ENST00000635819 61 ntBASIC2.7□□□□□ -1.98
CCDC85AQ96PX6 RNU6-1276P-201ENST00000365372 104 ntBASIC2.69□□□□□ -1.98
CCDC85AQ96PX6 MIR653-201ENST00000385279 96 ntBASIC2.69□□□□□ -1.98
CCDC85AQ96PX6 AC004965.1-201ENST00000413033 213 ntBASIC2.69□□□□□ -1.98
CCDC85AQ96PX6 RPS27P21-201ENST00000486977 252 ntBASIC2.69□□□□□ -1.98
CCDC85AQ96PX6 SNORD67.1-201ENST00000516618 108 ntBASIC2.69□□□□□ -1.98
CCDC85AQ96PX6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC85AQ96PX6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC85AQ96PX6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC85AQ96PX6 Y_RNA.448-201ENST00000384185 108 ntBASIC2.68□□□□□ -1.98
CCDC85AQ96PX6 RNU6-402P-201ENST00000410678 103 ntBASIC2.68□□□□□ -1.98
CCDC85AQ96PX6 MIR4287-201ENST00000579398 78 ntBASIC2.68□□□□□ -1.98
CCDC85AQ96PX6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CCDC85AQ96PX6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CCDC85AQ96PX6 Y_RNA.247-201ENST00000364500 92 ntBASIC2.67□□□□□ -1.98
CCDC85AQ96PX6 RNU6-1124P-201ENST00000384169 107 ntBASIC2.67□□□□□ -1.98
CCDC85AQ96PX6 MIR194-1-201ENST00000384892 85 ntBASIC2.67□□□□□ -1.98
CCDC85AQ96PX6 MIR4668-201ENST00000582284 70 ntBASIC2.67□□□□□ -1.98
CCDC85AQ96PX6 RNU6-86P-201ENST00000606534 107 ntBASIC2.67□□□□□ -1.98
CCDC85AQ96PX6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CCDC85AQ96PX6 Y_RNA.98-201ENST00000363109 102 ntBASIC2.66□□□□□ -1.98
CCDC85AQ96PX6 RNA5SP99-201ENST00000364020 114 ntBASIC2.66□□□□□ -1.98
CCDC85AQ96PX6 RNU6-1163P-201ENST00000364516 107 ntBASIC2.66□□□□□ -1.98
CCDC85AQ96PX6 RNU6-203P-201ENST00000384038 104 ntBASIC2.66□□□□□ -1.98
CCDC85AQ96PX6 MIR34C-201ENST00000384831 77 ntBASIC2.66□□□□□ -1.98
CCDC85AQ96PX6 RNU7-137P-201ENST00000516788 62 ntBASIC2.66□□□□□ -1.98
CCDC85AQ96PX6 MIR548AO-201ENST00000579992 96 ntBASIC2.66□□□□□ -1.98
CCDC85AQ96PX6 RNU6-90P-201ENST00000606352 106 ntBASIC2.66□□□□□ -1.98
CCDC85AQ96PX6 AC103810.7-201ENST00000607821 91 ntBASIC2.66□□□□□ -1.98
CCDC85AQ96PX6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.66□□□□□ -1.98
CCDC85AQ96PX6 RNA5SP48-201ENST00000363969 126 ntBASIC2.65□□□□□ -1.99
CCDC85AQ96PX6 RNU6-219P-201ENST00000364728 107 ntBASIC2.65□□□□□ -1.99
CCDC85AQ96PX6 RNU6-497P-201ENST00000365316 104 ntBASIC2.65□□□□□ -1.99
CCDC85AQ96PX6 MIR548G-201ENST00000408442 89 ntBASIC2.65□□□□□ -1.99
CCDC85AQ96PX6 MIR219B-201ENST00000637023 88 ntBASIC2.65□□□□□ -1.99
CCDC85AQ96PX6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC85AQ96PX6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 RNU6-228P-201ENST00000362700 106 ntBASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 Y_RNA.73-201ENST00000362910 113 ntBASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 RNU6-979P-201ENST00000383896 107 ntBASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 RNU6-1321P-201ENST00000390905 107 ntBASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 RNA5SP181-201ENST00000410246 98 ntBASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 Y_RNA.620-201ENST00000411009 88 ntBASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 RPL31P63-201ENST00000422565 375 ntBASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 RNU7-48P-201ENST00000458875 63 ntBASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 RNA5SP200-201ENST00000516360 103 ntBASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 AC015712.3-201ENST00000559380 164 ntBASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 MIR5588-201ENST00000581890 63 ntBASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 MIR6132-201ENST00000622083 109 ntBASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC85AQ96PX6 Y_RNA.567-201ENST00000384736 106 ntBASIC2.63□□□□□ -1.99
CCDC85AQ96PX6 RNU6-1307P-201ENST00000391012 103 ntBASIC2.63□□□□□ -1.99
CCDC85AQ96PX6 RNA5SP237-201ENST00000410414 113 ntBASIC2.63□□□□□ -1.99
CCDC85AQ96PX6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC85AQ96PX6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC85AQ96PX6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC85AQ96PX6 Y_RNA.426-201ENST00000384068 113 ntBASIC2.62□□□□□ -1.99
CCDC85AQ96PX6 snoU13.23-201ENST00000458863 104 ntBASIC2.62□□□□□ -1.99
CCDC85AQ96PX6 MIR514B-201ENST00000516774 80 ntBASIC2.62□□□□□ -1.99
CCDC85AQ96PX6 SNRPGP19-201ENST00000603826 189 ntBASIC2.62□□□□□ -1.99
CCDC85AQ96PX6 AL137847.3-201ENST00000611521 109 ntBASIC2.62□□□□□ -1.99
CCDC85AQ96PX6 AC025521.1-201ENST00000621624 286 ntBASIC2.62□□□□□ -1.99
CCDC85AQ96PX6 AP001362.1-201ENST00000625165 124 ntBASIC2.62□□□□□ -1.99
CCDC85AQ96PX6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC85AQ96PX6 RNU6-1244P-201ENST00000363614 108 ntBASIC2.61□□□□□ -1.99
CCDC85AQ96PX6 MIR513A1-201ENST00000385138 129 ntBASIC2.61□□□□□ -1.99
CCDC85AQ96PX6 RNA5SP212-201ENST00000391223 107 ntBASIC2.61□□□□□ -1.99
CCDC85AQ96PX6 AL356379.1-201ENST00000414105 126 ntBASIC2.61□□□□□ -1.99
CCDC85AQ96PX6 JTBP1-201ENST00000441314 247 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms