Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 DEFB131E-201ENST00000532329 154 ntBASIC1.95□□□□□ -2.1
ZSWIM3Q96MP5 AL513534.2-201ENST00000603836 250 ntBASIC1.95□□□□□ -2.1
ZSWIM3Q96MP5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
ZSWIM3Q96MP5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 RNA5SP276-201ENST00000362580 94 ntBASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 RNU6-1131P-201ENST00000364955 107 ntBASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 RNA5SP190-201ENST00000365222 118 ntBASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 RNU6-409P-201ENST00000384114 104 ntBASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 RNU6-616P-201ENST00000384353 107 ntBASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 RNU6-679P-201ENST00000391003 106 ntBASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 SNORD77B-201ENST00000391112 67 ntBASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 Y_RNA.601-201ENST00000410500 113 ntBASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 SNORD13-201ENST00000459299 104 ntBASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 RNA5SP57-201ENST00000459463 123 ntBASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 SCARNA23-201ENST00000516060 130 ntBASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 RNU6-1018P-201ENST00000516577 106 ntBASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 MIR3935-201ENST00000583472 104 ntBASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.94□□□□□ -2.1
ZSWIM3Q96MP5 Y_RNA.10-201ENST00000362371 110 ntBASIC1.93□□□□□ -2.1
ZSWIM3Q96MP5 RNU6-832P-201ENST00000363319 107 ntBASIC1.93□□□□□ -2.1
ZSWIM3Q96MP5 Y_RNA.164-201ENST00000363709 102 ntBASIC1.93□□□□□ -2.1
ZSWIM3Q96MP5 SNORA1.1-201ENST00000364671 133 ntBASIC1.93□□□□□ -2.1
ZSWIM3Q96MP5 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
ZSWIM3Q96MP5 JTBP1-201ENST00000441314 247 ntBASIC1.93□□□□□ -2.1
ZSWIM3Q96MP5 AC025033.1-201ENST00000463883 194 ntBASIC1.93□□□□□ -2.1
ZSWIM3Q96MP5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.93□□□□□ -2.1
ZSWIM3Q96MP5 AC084768.2-201ENST00000622736 221 ntBASIC1.93□□□□□ -2.1
ZSWIM3Q96MP5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.93□□□□□ -2.1
ZSWIM3Q96MP5 Y_RNA.4-201ENST00000362333 112 ntBASIC1.92□□□□□ -2.1
ZSWIM3Q96MP5 Y_RNA.155-201ENST00000363632 101 ntBASIC1.92□□□□□ -2.1
ZSWIM3Q96MP5 RNU6-294P-201ENST00000364999 102 ntBASIC1.92□□□□□ -2.1
ZSWIM3Q96MP5 Y_RNA.342-201ENST00000365352 113 ntBASIC1.92□□□□□ -2.1
ZSWIM3Q96MP5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
ZSWIM3Q96MP5 RNU6-250P-201ENST00000516958 103 ntBASIC1.92□□□□□ -2.1
ZSWIM3Q96MP5 AL096840.1-201ENST00000603287 93 ntBASIC1.92□□□□□ -2.1
ZSWIM3Q96MP5 FAM71BP1-201ENST00000604431 523 ntBASIC1.92□□□□□ -2.1
ZSWIM3Q96MP5 MALAT1.1-201ENST00000618249 95 ntBASIC1.92□□□□□ -2.1
ZSWIM3Q96MP5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
ZSWIM3Q96MP5 RNU6-1201P-201ENST00000384227 107 ntBASIC1.91□□□□□ -2.1
ZSWIM3Q96MP5 Y_RNA.558-201ENST00000384685 113 ntBASIC1.91□□□□□ -2.1
ZSWIM3Q96MP5 MIR520C-201ENST00000385005 87 ntBASIC1.91□□□□□ -2.1
ZSWIM3Q96MP5 SNORD41-201ENST00000386967 70 ntBASIC1.91□□□□□ -2.1
ZSWIM3Q96MP5 RNA5SP212-201ENST00000391223 107 ntBASIC1.91□□□□□ -2.1
ZSWIM3Q96MP5 RNU6-602P-201ENST00000411155 105 ntBASIC1.91□□□□□ -2.1
ZSWIM3Q96MP5 SNORA25.15-201ENST00000516487 89 ntBASIC1.91□□□□□ -2.1
ZSWIM3Q96MP5 RNU7-35P-201ENST00000517174 62 ntBASIC1.91□□□□□ -2.1
ZSWIM3Q96MP5 MIR4498-201ENST00000577599 66 ntBASIC1.91□□□□□ -2.1
ZSWIM3Q96MP5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.91□□□□□ -2.1
ZSWIM3Q96MP5 RNU6-1313P-201ENST00000362622 102 ntBASIC1.9□□□□□ -2.11
ZSWIM3Q96MP5 MIR605-201ENST00000385078 83 ntBASIC1.9□□□□□ -2.11
ZSWIM3Q96MP5 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
ZSWIM3Q96MP5 RNU6-322P-201ENST00000516010 103 ntBASIC1.9□□□□□ -2.11
ZSWIM3Q96MP5 MIR548AO-201ENST00000579992 96 ntBASIC1.9□□□□□ -2.11
ZSWIM3Q96MP5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
ZSWIM3Q96MP5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
ZSWIM3Q96MP5 Y_RNA.220-201ENST00000364244 109 ntBASIC1.89□□□□□ -2.11
ZSWIM3Q96MP5 Y_RNA.354-201ENST00000365448 111 ntBASIC1.89□□□□□ -2.11
ZSWIM3Q96MP5 RNU6-342P-201ENST00000384521 104 ntBASIC1.89□□□□□ -2.11
ZSWIM3Q96MP5 MIR513A1-201ENST00000385138 129 ntBASIC1.89□□□□□ -2.11
ZSWIM3Q96MP5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
ZSWIM3Q96MP5 AC004941.2-201ENST00000427009 228 ntBASIC1.89□□□□□ -2.11
ZSWIM3Q96MP5 RNU7-41P-201ENST00000515917 61 ntBASIC1.89□□□□□ -2.11
ZSWIM3Q96MP5 SNORD111.1-201ENST00000516421 86 ntBASIC1.89□□□□□ -2.11
ZSWIM3Q96MP5 RNU6-844P-201ENST00000517175 102 ntBASIC1.89□□□□□ -2.11
ZSWIM3Q96MP5 MIR4299-201ENST00000577899 72 ntBASIC1.89□□□□□ -2.11
ZSWIM3Q96MP5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
ZSWIM3Q96MP5 AL442128.1-201ENST00000615151 90 ntBASIC1.89□□□□□ -2.11
ZSWIM3Q96MP5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ZSWIM3Q96MP5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
ZSWIM3Q96MP5 RNU6-170P-201ENST00000362832 104 ntBASIC1.88□□□□□ -2.11
ZSWIM3Q96MP5 RNA5SP48-201ENST00000363969 126 ntBASIC1.88□□□□□ -2.11
ZSWIM3Q96MP5 SNORA32-201ENST00000384072 121 ntBASIC1.88□□□□□ -2.11
ZSWIM3Q96MP5 RNU6-439P-201ENST00000384188 106 ntBASIC1.88□□□□□ -2.11
ZSWIM3Q96MP5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
ZSWIM3Q96MP5 AL451046.2-201ENST00000403074 277 ntBASIC1.88□□□□□ -2.11
ZSWIM3Q96MP5 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
ZSWIM3Q96MP5 AC244636.1-201ENST00000421152 228 ntBASIC1.88□□□□□ -2.11
ZSWIM3Q96MP5 RNU6-521P-201ENST00000516663 105 ntBASIC1.88□□□□□ -2.11
ZSWIM3Q96MP5 AC015688.6-201ENST00000577737 104 ntBASIC1.88□□□□□ -2.11
ZSWIM3Q96MP5 SNORA77B-201ENST00000578179 125 ntBASIC1.88□□□□□ -2.11
ZSWIM3Q96MP5 MIR4251-201ENST00000635819 61 ntBASIC1.88□□□□□ -2.11
ZSWIM3Q96MP5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.88□□□□□ -2.11
ZSWIM3Q96MP5 SNORD73B-201ENST00000364394 72 ntBASIC1.87□□□□□ -2.11
ZSWIM3Q96MP5 SNORA7.5-201ENST00000410672 110 ntBASIC1.87□□□□□ -2.11
ZSWIM3Q96MP5 BTF3P4-201ENST00000418852 495 ntBASIC1.87□□□□□ -2.11
ZSWIM3Q96MP5 AC108729.3-201ENST00000513484 108 ntBASIC1.87□□□□□ -2.11
ZSWIM3Q96MP5 CYP3A52P-201ENST00000563326 91 ntBASIC1.87□□□□□ -2.11
ZSWIM3Q96MP5 MIR4713-201ENST00000582691 75 ntBASIC1.87□□□□□ -2.11
ZSWIM3Q96MP5 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
ZSWIM3Q96MP5 AL773524.1-201ENST00000614065 229 ntBASIC1.87□□□□□ -2.11
ZSWIM3Q96MP5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
ZSWIM3Q96MP5 SNORD115-35-201ENST00000365122 82 ntBASIC1.86□□□□□ -2.11
ZSWIM3Q96MP5 SNORA18-201ENST00000384416 132 ntBASIC1.86□□□□□ -2.11
ZSWIM3Q96MP5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.86□□□□□ -2.11
ZSWIM3Q96MP5 RNU4-62P-201ENST00000410125 130 ntBASIC1.86□□□□□ -2.11
ZSWIM3Q96MP5 RNU6-1086P-201ENST00000410930 100 ntBASIC1.86□□□□□ -2.11
ZSWIM3Q96MP5 AC090844.1-201ENST00000422019 156 ntBASIC1.86□□□□□ -2.11
ZSWIM3Q96MP5 AC245047.7-201ENST00000440265 293 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms