Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 Y_RNA.171-201ENST00000363760 102 ntBASIC1.31□□□□□ -2.2
CDK5RAP3Q96JB5 SNORD113.3-201ENST00000364630 78 ntBASIC1.31□□□□□ -2.2
CDK5RAP3Q96JB5 AL603908.1-201ENST00000406098 201 ntBASIC1.31□□□□□ -2.2
CDK5RAP3Q96JB5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.31□□□□□ -2.2
CDK5RAP3Q96JB5 AL137067.1-201ENST00000615933 120 ntBASIC1.31□□□□□ -2.2
CDK5RAP3Q96JB5 Y_RNA.168-201ENST00000363740 102 ntBASIC1.3□□□□□ -2.2
CDK5RAP3Q96JB5 RNU6-704P-201ENST00000364162 103 ntBASIC1.3□□□□□ -2.2
CDK5RAP3Q96JB5 SNORD50.2-201ENST00000365465 70 ntBASIC1.3□□□□□ -2.2
CDK5RAP3Q96JB5 MIR588-201ENST00000384900 83 ntBASIC1.3□□□□□ -2.2
CDK5RAP3Q96JB5 Y_RNA.586-201ENST00000391146 98 ntBASIC1.3□□□□□ -2.2
CDK5RAP3Q96JB5 RNU7-62P-201ENST00000458856 62 ntBASIC1.3□□□□□ -2.2
CDK5RAP3Q96JB5 RNU6-1211P-201ENST00000459179 105 ntBASIC1.3□□□□□ -2.2
CDK5RAP3Q96JB5 RNU7-164P-201ENST00000459221 62 ntBASIC1.3□□□□□ -2.2
CDK5RAP3Q96JB5 RNU6-1258P-201ENST00000516911 111 ntBASIC1.3□□□□□ -2.2
CDK5RAP3Q96JB5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.3□□□□□ -2.2
CDK5RAP3Q96JB5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CDK5RAP3Q96JB5 RNU1-124P-201ENST00000363861 145 ntBASIC1.29□□□□□ -2.2
CDK5RAP3Q96JB5 RNU6-647P-201ENST00000364243 107 ntBASIC1.29□□□□□ -2.2
CDK5RAP3Q96JB5 RNU6-1237P-201ENST00000384777 107 ntBASIC1.29□□□□□ -2.2
CDK5RAP3Q96JB5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.29□□□□□ -2.2
CDK5RAP3Q96JB5 SNORD111-201ENST00000408139 94 ntBASIC1.29□□□□□ -2.2
CDK5RAP3Q96JB5 snoU13.2-201ENST00000459201 104 ntBASIC1.29□□□□□ -2.2
CDK5RAP3Q96JB5 RNU7-113P-201ENST00000459273 62 ntBASIC1.29□□□□□ -2.2
CDK5RAP3Q96JB5 RNU6-237P-201ENST00000515985 71 ntBASIC1.29□□□□□ -2.2
CDK5RAP3Q96JB5 RNU2-35P-201ENST00000516446 142 ntBASIC1.29□□□□□ -2.2
CDK5RAP3Q96JB5 MIR4781-201ENST00000585250 76 ntBASIC1.29□□□□□ -2.2
CDK5RAP3Q96JB5 snoU13.31-201ENST00000607291 104 ntBASIC1.29□□□□□ -2.2
CDK5RAP3Q96JB5 AC106800.4-201ENST00000614905 153 ntBASIC1.29□□□□□ -2.2
CDK5RAP3Q96JB5 MIR6740-201ENST00000618268 113 ntBASIC1.29□□□□□ -2.2
CDK5RAP3Q96JB5 RNU6-580P-201ENST00000365159 107 ntBASIC1.28□□□□□ -2.2
CDK5RAP3Q96JB5 AL512326.2-201ENST00000426359 151 ntBASIC1.28□□□□□ -2.2
CDK5RAP3Q96JB5 AL158147.1-201ENST00000443970 75 ntBASIC1.28□□□□□ -2.2
CDK5RAP3Q96JB5 RNU6-94P-201ENST00000607728 107 ntBASIC1.28□□□□□ -2.2
CDK5RAP3Q96JB5 RNU6-235P-201ENST00000362644 107 ntBASIC1.27□□□□□ -2.21
CDK5RAP3Q96JB5 MIR539-201ENST00000365690 78 ntBASIC1.27□□□□□ -2.21
CDK5RAP3Q96JB5 MIR1285-1-201ENST00000408593 84 ntBASIC1.27□□□□□ -2.21
CDK5RAP3Q96JB5 RPS23P4-201ENST00000487908 423 ntBASIC1.27□□□□□ -2.21
CDK5RAP3Q96JB5 AC113410.1-201ENST00000505029 247 ntBASIC1.27□□□□□ -2.21
CDK5RAP3Q96JB5 RNU7-123P-201ENST00000515911 60 ntBASIC1.27□□□□□ -2.21
CDK5RAP3Q96JB5 RNU6-971P-201ENST00000516920 106 ntBASIC1.27□□□□□ -2.21
CDK5RAP3Q96JB5 AC004812.1-201ENST00000540773 146 ntBASIC1.27□□□□□ -2.21
CDK5RAP3Q96JB5 AC012676.2-201ENST00000619258 186 ntBASIC1.27□□□□□ -2.21
CDK5RAP3Q96JB5 Y_RNA.280-201ENST00000364765 112 ntBASIC1.26□□□□□ -2.21
CDK5RAP3Q96JB5 Y_RNA.298-201ENST00000364960 107 ntBASIC1.26□□□□□ -2.21
CDK5RAP3Q96JB5 MIR19B1-201ENST00000384829 87 ntBASIC1.26□□□□□ -2.21
CDK5RAP3Q96JB5 RNA5SP237-201ENST00000410414 113 ntBASIC1.26□□□□□ -2.21
CDK5RAP3Q96JB5 RNU6-994P-201ENST00000410507 111 ntBASIC1.26□□□□□ -2.21
CDK5RAP3Q96JB5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.26□□□□□ -2.21
CDK5RAP3Q96JB5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.26□□□□□ -2.21
CDK5RAP3Q96JB5 Y_RNA.327-201ENST00000365201 102 ntBASIC1.25□□□□□ -2.21
CDK5RAP3Q96JB5 Y_RNA.470-201ENST00000384307 117 ntBASIC1.25□□□□□ -2.21
CDK5RAP3Q96JB5 SNORA18-201ENST00000384416 132 ntBASIC1.25□□□□□ -2.21
CDK5RAP3Q96JB5 Y_RNA.531-201ENST00000384589 121 ntBASIC1.25□□□□□ -2.21
CDK5RAP3Q96JB5 RNU6-1165P-201ENST00000410119 107 ntBASIC1.25□□□□□ -2.21
CDK5RAP3Q96JB5 RN7SKP19-201ENST00000516016 252 ntBASIC1.25□□□□□ -2.21
CDK5RAP3Q96JB5 RNY4P20-201ENST00000516678 93 ntBASIC1.25□□□□□ -2.21
CDK5RAP3Q96JB5 RNA5SP33-201ENST00000516687 98 ntBASIC1.25□□□□□ -2.21
CDK5RAP3Q96JB5 IGKV1-22-201ENST00000524313 326 ntBASIC1.25□□□□□ -2.21
CDK5RAP3Q96JB5 uc_338.6-201ENST00000613544 171 ntBASIC1.25□□□□□ -2.21
CDK5RAP3Q96JB5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CDK5RAP3Q96JB5 RNU6-342P-201ENST00000384521 104 ntBASIC1.24□□□□□ -2.21
CDK5RAP3Q96JB5 snoU13.21-201ENST00000459368 105 ntBASIC1.24□□□□□ -2.21
CDK5RAP3Q96JB5 SNORD124-201ENST00000459577 104 ntBASIC1.24□□□□□ -2.21
CDK5RAP3Q96JB5 MIR1263-201ENST00000408324 86 ntBASIC1.23□□□□□ -2.21
CDK5RAP3Q96JB5 TMSB4XP3-201ENST00000445144 114 ntBASIC1.23□□□□□ -2.21
CDK5RAP3Q96JB5 AC108729.3-201ENST00000513484 108 ntBASIC1.23□□□□□ -2.21
CDK5RAP3Q96JB5 RNU6-1061P-201ENST00000516530 99 ntBASIC1.23□□□□□ -2.21
CDK5RAP3Q96JB5 MIR4295-201ENST00000585286 85 ntBASIC1.23□□□□□ -2.21
CDK5RAP3Q96JB5 SNORD115-2-201ENST00000362842 82 ntBASIC1.22□□□□□ -2.21
CDK5RAP3Q96JB5 SNORD115-20-201ENST00000365099 82 ntBASIC1.22□□□□□ -2.21
CDK5RAP3Q96JB5 MIR563-201ENST00000385080 79 ntBASIC1.22□□□□□ -2.21
CDK5RAP3Q96JB5 SNORD83.1-201ENST00000411362 77 ntBASIC1.22□□□□□ -2.21
CDK5RAP3Q96JB5 AC087343.1-201ENST00000477341 475 ntBASIC1.22□□□□□ -2.21
CDK5RAP3Q96JB5 AL662814.1-201ENST00000617364 121 ntBASIC1.22□□□□□ -2.21
CDK5RAP3Q96JB5 RNU6-934P-201ENST00000365154 107 ntBASIC1.21□□□□□ -2.22
CDK5RAP3Q96JB5 SNORA32-201ENST00000384072 121 ntBASIC1.21□□□□□ -2.22
CDK5RAP3Q96JB5 MIR200A-201ENST00000384875 90 ntBASIC1.21□□□□□ -2.22
CDK5RAP3Q96JB5 MIR942-201ENST00000401111 86 ntBASIC1.21□□□□□ -2.22
CDK5RAP3Q96JB5 Y_RNA.617-201ENST00000410920 90 ntBASIC1.21□□□□□ -2.22
CDK5RAP3Q96JB5 AC067940.1-201ENST00000458411 300 ntBASIC1.21□□□□□ -2.22
CDK5RAP3Q96JB5 RNU6-781P-201ENST00000516377 101 ntBASIC1.21□□□□□ -2.22
CDK5RAP3Q96JB5 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.21□□□□□ -2.22
CDK5RAP3Q96JB5 AC022523.2-201ENST00000561045 150 ntBASIC1.21□□□□□ -2.22
CDK5RAP3Q96JB5 MIR3124-201ENST00000582636 67 ntBASIC1.21□□□□□ -2.22
CDK5RAP3Q96JB5 AL359821.1-201ENST00000605519 182 ntBASIC1.21□□□□□ -2.22
CDK5RAP3Q96JB5 MIR30D-201ENST00000362283 70 ntBASIC1.2□□□□□ -2.22
CDK5RAP3Q96JB5 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.2□□□□□ -2.22
CDK5RAP3Q96JB5 RPS29P28-201ENST00000446439 141 ntBASIC1.2□□□□□ -2.22
CDK5RAP3Q96JB5 MIR18B-201ENST00000454574 71 ntBASIC1.2□□□□□ -2.22
CDK5RAP3Q96JB5 AC141846.1-201ENST00000568348 142 ntBASIC1.2□□□□□ -2.22
CDK5RAP3Q96JB5 MIR548AE2-201ENST00000583456 67 ntBASIC1.2□□□□□ -2.22
CDK5RAP3Q96JB5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.19□□□□□ -2.22
CDK5RAP3Q96JB5 AC015818.7-201ENST00000428754 109 ntBASIC1.19□□□□□ -2.22
CDK5RAP3Q96JB5 AC087499.7-201ENST00000441958 109 ntBASIC1.19□□□□□ -2.22
CDK5RAP3Q96JB5 RPL39P25-201ENST00000449384 154 ntBASIC1.19□□□□□ -2.22
CDK5RAP3Q96JB5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.19□□□□□ -2.22
CDK5RAP3Q96JB5 UBL5P1-201ENST00000507979 193 ntBASIC1.19□□□□□ -2.22
CDK5RAP3Q96JB5 RNU6-1234P-201ENST00000516877 103 ntBASIC1.19□□□□□ -2.22
CDK5RAP3Q96JB5 MIR4498-201ENST00000577599 66 ntBASIC1.19□□□□□ -2.22
CDK5RAP3Q96JB5 MIR4771-2-201ENST00000577758 74 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms