Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 RNU6-35P-201ENST00000384530 107 ntBASIC-0.76□□□□□ -2.53
LRRC39Q96DD0 RPS29P8-201ENST00000445109 171 ntBASIC-0.76□□□□□ -2.53
LRRC39Q96DD0 HSPE1P25-201ENST00000455484 251 ntBASIC-0.76□□□□□ -2.53
LRRC39Q96DD0 RNU7-188P-201ENST00000517063 64 ntBASIC-0.76□□□□□ -2.53
LRRC39Q96DD0 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.76□□□□□ -2.53
LRRC39Q96DD0 MIR5690-201ENST00000583739 73 ntBASIC-0.76□□□□□ -2.53
LRRC39Q96DD0 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.77□□□□□ -2.53
LRRC39Q96DD0 RNU6-449P-201ENST00000383914 107 ntBASIC-0.77□□□□□ -2.53
LRRC39Q96DD0 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.77□□□□□ -2.53
LRRC39Q96DD0 MIR604-201ENST00000384880 94 ntBASIC-0.77□□□□□ -2.53
LRRC39Q96DD0 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.77□□□□□ -2.53
LRRC39Q96DD0 AC024909.2-201ENST00000553035 286 ntBASIC-0.77□□□□□ -2.53
LRRC39Q96DD0 MIR3129-201ENST00000581095 76 ntBASIC-0.77□□□□□ -2.53
LRRC39Q96DD0 MIR4436A-201ENST00000585278 85 ntBASIC-0.77□□□□□ -2.53
LRRC39Q96DD0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.78□□□□□ -2.53
LRRC39Q96DD0 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.78□□□□□ -2.53
LRRC39Q96DD0 RNU4-84P-201ENST00000364200 139 ntBASIC-0.78□□□□□ -2.53
LRRC39Q96DD0 RNU4-16P-201ENST00000364737 141 ntBASIC-0.78□□□□□ -2.53
LRRC39Q96DD0 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.78□□□□□ -2.53
LRRC39Q96DD0 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.78□□□□□ -2.53
LRRC39Q96DD0 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.78□□□□□ -2.53
LRRC39Q96DD0 TRAJ51-201ENST00000504127 63 ntBASIC-0.78□□□□□ -2.53
LRRC39Q96DD0 RNA5SP153-201ENST00000516498 76 ntBASIC-0.78□□□□□ -2.53
LRRC39Q96DD0 MIR548H5-201ENST00000580314 60 ntBASIC-0.78□□□□□ -2.53
LRRC39Q96DD0 MIR3920-201ENST00000581751 86 ntBASIC-0.78□□□□□ -2.53
LRRC39Q96DD0 AL359881.1-201ENST00000602916 267 ntBASIC-0.78□□□□□ -2.53
LRRC39Q96DD0 AL008718.3-201ENST00000610217 321 ntBASIC-0.78□□□□□ -2.53
LRRC39Q96DD0 U4.5-201ENST00000617137 123 ntBASIC-0.78□□□□□ -2.53
LRRC39Q96DD0 SNORD114-14-201ENST00000362723 75 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 MIR599-201ENST00000385069 95 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 MIR548F1-201ENST00000408667 84 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 RNU2-55P-201ENST00000411146 174 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 U8.20-201ENST00000459445 131 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 RNU6-507P-201ENST00000516045 100 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 RNU6-758P-201ENST00000516292 89 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 RNU7-137P-201ENST00000516788 62 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 RNA5SP66-201ENST00000517178 101 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 RNA5SP169-201ENST00000517268 117 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 MIR4473-201ENST00000583731 91 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 SNORD58B-201ENST00000607313 66 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 AC098479.1-201ENST00000609225 154 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 AC002553.4-201ENST00000616896 331 ntBASIC-0.79□□□□□ -2.54
LRRC39Q96DD0 SNORD113-8-201ENST00000363497 74 ntBASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.516-201ENST00000384541 124 ntBASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 MIR1277-201ENST00000408536 78 ntBASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 AL022718.1-201ENST00000412004 84 ntBASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 Z95118.1-201ENST00000421372 247 ntBASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 AC097635.1-201ENST00000450678 155 ntBASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 RNU6-358P-201ENST00000516564 75 ntBASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 RNU6-175P-201ENST00000516896 107 ntBASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 AC104985.2-201ENST00000620598 500 ntBASIC-0.8□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.81□□□□□ -2.54
LRRC39Q96DD0 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.81□□□□□ -2.54
LRRC39Q96DD0 RNU4-24P-201ENST00000364565 139 ntBASIC-0.81□□□□□ -2.54
LRRC39Q96DD0 RNU1-141P-201ENST00000364623 158 ntBASIC-0.81□□□□□ -2.54
LRRC39Q96DD0 SNORA3B-201ENST00000391305 131 ntBASIC-0.81□□□□□ -2.54
LRRC39Q96DD0 AL603914.1-201ENST00000401964 204 ntBASIC-0.81□□□□□ -2.54
LRRC39Q96DD0 MIR1265-201ENST00000408444 86 ntBASIC-0.81□□□□□ -2.54
LRRC39Q96DD0 SNRPGP8-201ENST00000454064 226 ntBASIC-0.81□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.81□□□□□ -2.54
LRRC39Q96DD0 SNORA40.14-201ENST00000516543 86 ntBASIC-0.81□□□□□ -2.54
LRRC39Q96DD0 SNORD67.1-201ENST00000516618 108 ntBASIC-0.81□□□□□ -2.54
LRRC39Q96DD0 MIR5688-201ENST00000580619 83 ntBASIC-0.81□□□□□ -2.54
LRRC39Q96DD0 RPS29P30-201ENST00000600975 111 ntBASIC-0.81□□□□□ -2.54
LRRC39Q96DD0 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.81□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.82□□□□□ -2.54
LRRC39Q96DD0 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.82□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.82□□□□□ -2.54
LRRC39Q96DD0 SNORD116-29-201ENST00000384516 83 ntBASIC-0.82□□□□□ -2.54
LRRC39Q96DD0 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.82□□□□□ -2.54
LRRC39Q96DD0 RNU6-455P-201ENST00000384681 107 ntBASIC-0.82□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.82□□□□□ -2.54
LRRC39Q96DD0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.82□□□□□ -2.54
LRRC39Q96DD0 RNU6-718P-201ENST00000516166 105 ntBASIC-0.82□□□□□ -2.54
LRRC39Q96DD0 RNU6-720P-201ENST00000516363 108 ntBASIC-0.82□□□□□ -2.54
LRRC39Q96DD0 AC133104.2-201ENST00000615272 193 ntBASIC-0.82□□□□□ -2.54
LRRC39Q96DD0 RNU6-845P-201ENST00000362578 103 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 MIR539-201ENST00000365690 78 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 270.5 ms