Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 MIR424-201ENST00000362227 98 ntBASIC2.55□□□□□ -2
TNFRSF25Q93038 MIR518A2-201ENST00000384966 87 ntBASIC2.55□□□□□ -2
TNFRSF25Q93038 MIR221-201ENST00000385135 110 ntBASIC2.55□□□□□ -2
TNFRSF25Q93038 RNU6-519P-201ENST00000410590 108 ntBASIC2.55□□□□□ -2
TNFRSF25Q93038 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.55□□□□□ -2
TNFRSF25Q93038 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TNFRSF25Q93038 AC080100.1-201ENST00000624239 5356 ntBASIC2.55□□□□□ -2
TNFRSF25Q93038 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
TNFRSF25Q93038 RNU6-296P-201ENST00000384608 107 ntBASIC2.54□□□□□ -2
TNFRSF25Q93038 MIR520C-201ENST00000385005 87 ntBASIC2.54□□□□□ -2
TNFRSF25Q93038 RNU6-788P-201ENST00000390967 104 ntBASIC2.54□□□□□ -2
TNFRSF25Q93038 RNU4-53P-201ENST00000410828 140 ntBASIC2.54□□□□□ -2
TNFRSF25Q93038 RNA5SP501-201ENST00000410990 112 ntBASIC2.54□□□□□ -2
TNFRSF25Q93038 AC133485.1-201ENST00000567176 124 ntBASIC2.54□□□□□ -2
TNFRSF25Q93038 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.54□□□□□ -2
TNFRSF25Q93038 SNORA2B-201ENST00000384583 137 ntBASIC2.53□□□□□ -2
TNFRSF25Q93038 Y_RNA.565-201ENST00000384719 101 ntBASIC2.53□□□□□ -2
TNFRSF25Q93038 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
TNFRSF25Q93038 RNA5SP237-201ENST00000410414 113 ntBASIC2.53□□□□□ -2
TNFRSF25Q93038 AC027119.1-201ENST00000440877 241 ntBASIC2.53□□□□□ -2
TNFRSF25Q93038 MIR548AO-201ENST00000579992 96 ntBASIC2.53□□□□□ -2
TNFRSF25Q93038 MIR5194-201ENST00000582634 120 ntBASIC2.53□□□□□ -2
TNFRSF25Q93038 MIR5002-201ENST00000584713 97 ntBASIC2.53□□□□□ -2
TNFRSF25Q93038 RNY1P13-201ENST00000365030 105 ntBASIC2.52□□□□□ -2.01
TNFRSF25Q93038 SNORD38B-201ENST00000384690 67 ntBASIC2.52□□□□□ -2.01
TNFRSF25Q93038 SNORA59A-201ENST00000459326 152 ntBASIC2.52□□□□□ -2.01
TNFRSF25Q93038 AC104435.1-201ENST00000483483 166 ntBASIC2.52□□□□□ -2.01
TNFRSF25Q93038 AC140658.3-201ENST00000567603 271 ntBASIC2.52□□□□□ -2.01
TNFRSF25Q93038 SNORD38B-202ENST00000625943 69 ntBASIC2.52□□□□□ -2.01
TNFRSF25Q93038 AC131280.1-202ENST00000624067 4211 ntBASIC2.51□□□□□ -2.01
TNFRSF25Q93038 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TNFRSF25Q93038 SNORA67.1-201ENST00000364749 141 ntBASIC2.51□□□□□ -2.01
TNFRSF25Q93038 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TNFRSF25Q93038 RNA5SP200-201ENST00000516360 103 ntBASIC2.51□□□□□ -2.01
TNFRSF25Q93038 RNA5SP82-201ENST00000516707 92 ntBASIC2.51□□□□□ -2.01
TNFRSF25Q93038 AC145423.2-201ENST00000610631 239 ntBASIC2.51□□□□□ -2.01
TNFRSF25Q93038 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.51□□□□□ -2.01
TNFRSF25Q93038 RNU4-32P-201ENST00000363404 141 ntBASIC2.5□□□□□ -2.01
TNFRSF25Q93038 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.5□□□□□ -2.01
TNFRSF25Q93038 AC011753.1-201ENST00000451001 220 ntBASIC2.5□□□□□ -2.01
TNFRSF25Q93038 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.5□□□□□ -2.01
TNFRSF25Q93038 MIR4251-201ENST00000635819 61 ntBASIC2.5□□□□□ -2.01
TNFRSF25Q93038 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
TNFRSF25Q93038 Y_RNA.500-201ENST00000384466 111 ntBASIC2.49□□□□□ -2.01
TNFRSF25Q93038 HMGN2P39-201ENST00000398005 273 ntBASIC2.49□□□□□ -2.01
TNFRSF25Q93038 AC019129.1-201ENST00000403786 261 ntBASIC2.49□□□□□ -2.01
TNFRSF25Q93038 SNORA3.2-201ENST00000408221 125 ntBASIC2.49□□□□□ -2.01
TNFRSF25Q93038 MIR1236-201ENST00000408340 102 ntBASIC2.49□□□□□ -2.01
TNFRSF25Q93038 RPS29P11-201ENST00000496507 171 ntBASIC2.49□□□□□ -2.01
TNFRSF25Q93038 RNU6-917P-201ENST00000516294 104 ntBASIC2.49□□□□□ -2.01
TNFRSF25Q93038 RNU7-153P-201ENST00000516455 62 ntBASIC2.49□□□□□ -2.01
TNFRSF25Q93038 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
TNFRSF25Q93038 RNU6-1229P-201ENST00000364295 107 ntBASIC2.48□□□□□ -2.01
TNFRSF25Q93038 AC141846.1-201ENST00000568348 142 ntBASIC2.48□□□□□ -2.01
TNFRSF25Q93038 MIR3935-201ENST00000583472 104 ntBASIC2.48□□□□□ -2.01
TNFRSF25Q93038 U7.4-201ENST00000614961 63 ntBASIC2.48□□□□□ -2.01
TNFRSF25Q93038 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TNFRSF25Q93038 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
TNFRSF25Q93038 HSBP1P2-201ENST00000299671 229 ntBASIC2.47□□□□□ -2.01
TNFRSF25Q93038 SNORA48.3-201ENST00000391081 134 ntBASIC2.47□□□□□ -2.01
TNFRSF25Q93038 AC087499.7-201ENST00000441958 109 ntBASIC2.47□□□□□ -2.01
TNFRSF25Q93038 SNORD53-201ENST00000579969 78 ntBASIC2.47□□□□□ -2.01
TNFRSF25Q93038 AP000753.3-201ENST00000604083 169 ntBASIC2.47□□□□□ -2.01
TNFRSF25Q93038 MIR8066-201ENST00000617280 78 ntBASIC2.47□□□□□ -2.01
TNFRSF25Q93038 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.47□□□□□ -2.01
TNFRSF25Q93038 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
TNFRSF25Q93038 RNU6-315P-201ENST00000362666 107 ntBASIC2.46□□□□□ -2.02
TNFRSF25Q93038 RNU6-129P-201ENST00000391022 107 ntBASIC2.46□□□□□ -2.02
TNFRSF25Q93038 SNORA25.13-201ENST00000516395 103 ntBASIC2.46□□□□□ -2.02
TNFRSF25Q93038 AC090897.1-201ENST00000580909 226 ntBASIC2.46□□□□□ -2.02
TNFRSF25Q93038 MIR4658-201ENST00000584344 65 ntBASIC2.46□□□□□ -2.02
TNFRSF25Q93038 AL662814.1-201ENST00000617364 121 ntBASIC2.46□□□□□ -2.02
TNFRSF25Q93038 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.46□□□□□ -2.02
TNFRSF25Q93038 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TNFRSF25Q93038 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
TNFRSF25Q93038 Y_RNA.57-201ENST00000362806 113 ntBASIC2.45□□□□□ -2.02
TNFRSF25Q93038 RNA5SP133-201ENST00000363368 119 ntBASIC2.45□□□□□ -2.02
TNFRSF25Q93038 Z98742.3-201ENST00000418637 326 ntBASIC2.45□□□□□ -2.02
TNFRSF25Q93038 RPS27P21-201ENST00000486977 252 ntBASIC2.45□□□□□ -2.02
TNFRSF25Q93038 U1.36-201ENST00000620684 176 ntBASIC2.45□□□□□ -2.02
TNFRSF25Q93038 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TNFRSF25Q93038 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.44□□□□□ -2.02
TNFRSF25Q93038 RNY1P2-201ENST00000364820 117 ntBASIC2.44□□□□□ -2.02
TNFRSF25Q93038 RN7SKP223-201ENST00000410582 62 ntBASIC2.44□□□□□ -2.02
TNFRSF25Q93038 AL356320.1-201ENST00000429616 163 ntBASIC2.44□□□□□ -2.02
TNFRSF25Q93038 SNORD4B-201ENST00000459083 72 ntBASIC2.44□□□□□ -2.02
TNFRSF25Q93038 AC008413.1-201ENST00000511864 177 ntBASIC2.44□□□□□ -2.02
TNFRSF25Q93038 RNU7-41P-201ENST00000515917 61 ntBASIC2.44□□□□□ -2.02
TNFRSF25Q93038 DEFB122-202ENST00000569013 197 ntBASIC2.44□□□□□ -2.02
TNFRSF25Q93038 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.43□□□□□ -2.02
TNFRSF25Q93038 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TNFRSF25Q93038 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TNFRSF25Q93038 RNU6-1123P-201ENST00000362347 106 ntBASIC2.43□□□□□ -2.02
TNFRSF25Q93038 Y_RNA.545-201ENST00000384652 105 ntBASIC2.43□□□□□ -2.02
TNFRSF25Q93038 RNA5SP270-201ENST00000411361 118 ntBASIC2.43□□□□□ -2.02
TNFRSF25Q93038 AC090255.1-201ENST00000495779 349 ntBASIC2.43□□□□□ -2.02
TNFRSF25Q93038 RNU6-322P-201ENST00000516010 103 ntBASIC2.43□□□□□ -2.02
TNFRSF25Q93038 SNORA31.17-201ENST00000516953 127 ntBASIC2.43□□□□□ -2.02
TNFRSF25Q93038 MIR1273D-201ENST00000577266 86 ntBASIC2.43□□□□□ -2.02
TNFRSF25Q93038 MIR4500-201ENST00000579472 76 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms