Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MIR1261-201ENST00000408659 82 ntBASIC1.97□□□□□ -2.09
BRF1Q92994 HSPE1P24-201ENST00000450782 238 ntBASIC1.97□□□□□ -2.09
BRF1Q92994 AC009474.2-201ENST00000451383 136 ntBASIC1.97□□□□□ -2.09
BRF1Q92994 RNU7-35P-201ENST00000517174 62 ntBASIC1.97□□□□□ -2.09
BRF1Q92994 MIR3192-201ENST00000584920 77 ntBASIC1.97□□□□□ -2.09
BRF1Q92994 Y_RNA.818-201ENST00000618813 71 ntBASIC1.97□□□□□ -2.09
BRF1Q92994 RNU6-409P-201ENST00000384114 104 ntBASIC1.96□□□□□ -2.1
BRF1Q92994 RNU6-616P-201ENST00000384353 107 ntBASIC1.96□□□□□ -2.1
BRF1Q92994 SNORD38B-201ENST00000384690 67 ntBASIC1.96□□□□□ -2.1
BRF1Q92994 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
BRF1Q92994 AC090844.1-201ENST00000422019 156 ntBASIC1.96□□□□□ -2.1
BRF1Q92994 AC245047.7-201ENST00000440265 293 ntBASIC1.96□□□□□ -2.1
BRF1Q92994 HMGN2P23-201ENST00000456759 269 ntBASIC1.96□□□□□ -2.1
BRF1Q92994 MIR3198-2-201ENST00000577868 80 ntBASIC1.96□□□□□ -2.1
BRF1Q92994 AL096861.1-201ENST00000610899 123 ntBASIC1.96□□□□□ -2.1
BRF1Q92994 SNORD38B-202ENST00000625943 69 ntBASIC1.96□□□□□ -2.1
BRF1Q92994 RNA5SP363-201ENST00000365072 115 ntBASIC1.95□□□□□ -2.1
BRF1Q92994 MIR590-201ENST00000385008 97 ntBASIC1.95□□□□□ -2.1
BRF1Q92994 RNU6-733P-201ENST00000410759 104 ntBASIC1.95□□□□□ -2.1
BRF1Q92994 snoU13.26-201ENST00000459452 105 ntBASIC1.95□□□□□ -2.1
BRF1Q92994 MIR4694-201ENST00000578534 80 ntBASIC1.95□□□□□ -2.1
BRF1Q92994 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
BRF1Q92994 RNU6-1099P-201ENST00000363533 107 ntBASIC1.94□□□□□ -2.1
BRF1Q92994 Y_RNA.155-201ENST00000363632 101 ntBASIC1.94□□□□□ -2.1
BRF1Q92994 SNORD1A-201ENST00000364968 72 ntBASIC1.94□□□□□ -2.1
BRF1Q92994 SNORA32-201ENST00000384072 121 ntBASIC1.94□□□□□ -2.1
BRF1Q92994 RNU6-905P-201ENST00000384434 107 ntBASIC1.94□□□□□ -2.1
BRF1Q92994 RNU6-342P-201ENST00000384521 104 ntBASIC1.94□□□□□ -2.1
BRF1Q92994 MIR504-201ENST00000385065 83 ntBASIC1.94□□□□□ -2.1
BRF1Q92994 RNU6-1018P-201ENST00000516577 106 ntBASIC1.94□□□□□ -2.1
BRF1Q92994 RNU6-158P-201ENST00000517104 100 ntBASIC1.94□□□□□ -2.1
BRF1Q92994 FAM71BP1-201ENST00000604431 523 ntBASIC1.94□□□□□ -2.1
BRF1Q92994 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
BRF1Q92994 AP000648.3-201ENST00000623539 4507 ntBASIC1.93□□□□□ -2.1
BRF1Q92994 RNY3P2-201ENST00000362918 102 ntBASIC1.93□□□□□ -2.1
BRF1Q92994 SNORA18-201ENST00000384416 132 ntBASIC1.93□□□□□ -2.1
BRF1Q92994 MIR1302-7-201ENST00000408841 72 ntBASIC1.93□□□□□ -2.1
BRF1Q92994 SNORA19.1-201ENST00000410656 129 ntBASIC1.93□□□□□ -2.1
BRF1Q92994 RNU6-1086P-201ENST00000410930 100 ntBASIC1.93□□□□□ -2.1
BRF1Q92994 SNORA40.13-201ENST00000516379 120 ntBASIC1.93□□□□□ -2.1
BRF1Q92994 MIR3122-201ENST00000577243 73 ntBASIC1.93□□□□□ -2.1
BRF1Q92994 PRELID3BP2-201ENST00000605362 201 ntBASIC1.93□□□□□ -2.1
BRF1Q92994 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
BRF1Q92994 RNU6-1255P-201ENST00000363434 112 ntBASIC1.92□□□□□ -2.1
BRF1Q92994 RNU6-640P-201ENST00000363693 105 ntBASIC1.92□□□□□ -2.1
BRF1Q92994 RNU4-36P-201ENST00000364294 144 ntBASIC1.92□□□□□ -2.1
BRF1Q92994 Y_RNA.360-201ENST00000365512 102 ntBASIC1.92□□□□□ -2.1
BRF1Q92994 RNU6-679P-201ENST00000391003 106 ntBASIC1.92□□□□□ -2.1
BRF1Q92994 SNORA26.9-201ENST00000391322 122 ntBASIC1.92□□□□□ -2.1
BRF1Q92994 AL353813.1-201ENST00000440700 253 ntBASIC1.92□□□□□ -2.1
BRF1Q92994 AC005908.1-201ENST00000468701 347 ntBASIC1.92□□□□□ -2.1
BRF1Q92994 DEFB131E-201ENST00000532329 154 ntBASIC1.92□□□□□ -2.1
BRF1Q92994 AC141557.1-201ENST00000540982 400 ntBASIC1.92□□□□□ -2.1
BRF1Q92994 AP000942.3-201ENST00000603702 160 ntBASIC1.92□□□□□ -2.1
BRF1Q92994 MIR8063-201ENST00000621930 81 ntBASIC1.92□□□□□ -2.1
BRF1Q92994 Y_RNA.10-201ENST00000362371 110 ntBASIC1.91□□□□□ -2.1
BRF1Q92994 MIR577-201ENST00000385196 96 ntBASIC1.91□□□□□ -2.1
BRF1Q92994 RPL23AP42-201ENST00000471152 471 ntBASIC1.91□□□□□ -2.1
BRF1Q92994 RPL30P7-201ENST00000479312 323 ntBASIC1.91□□□□□ -2.1
BRF1Q92994 AL133373.1-201ENST00000497098 94 ntBASIC1.91□□□□□ -2.1
BRF1Q92994 AC079140.2-201ENST00000506193 142 ntBASIC1.91□□□□□ -2.1
BRF1Q92994 SNORA25.15-201ENST00000516487 89 ntBASIC1.91□□□□□ -2.1
BRF1Q92994 AP003716.2-201ENST00000528260 108 ntBASIC1.91□□□□□ -2.1
BRF1Q92994 MIR4255-201ENST00000579351 72 ntBASIC1.91□□□□□ -2.1
BRF1Q92994 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
BRF1Q92994 RNU6-832P-201ENST00000363319 107 ntBASIC1.9□□□□□ -2.11
BRF1Q92994 SNORD115-35-201ENST00000365122 82 ntBASIC1.9□□□□□ -2.11
BRF1Q92994 Y_RNA.377-201ENST00000365644 108 ntBASIC1.9□□□□□ -2.11
BRF1Q92994 RNU6-1065P-201ENST00000384513 106 ntBASIC1.9□□□□□ -2.11
BRF1Q92994 MIR605-201ENST00000385078 83 ntBASIC1.9□□□□□ -2.11
BRF1Q92994 Y_RNA.601-201ENST00000410500 113 ntBASIC1.9□□□□□ -2.11
BRF1Q92994 AC244023.1-201ENST00000426884 112 ntBASIC1.9□□□□□ -2.11
BRF1Q92994 AC027119.1-201ENST00000440877 241 ntBASIC1.9□□□□□ -2.11
BRF1Q92994 RPL39P39-201ENST00000455840 151 ntBASIC1.9□□□□□ -2.11
BRF1Q92994 snoU13.25-201ENST00000458945 104 ntBASIC1.9□□□□□ -2.11
BRF1Q92994 RNU6-521P-201ENST00000516663 105 ntBASIC1.9□□□□□ -2.11
BRF1Q92994 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.9□□□□□ -2.11
BRF1Q92994 AC242498.1-201ENST00000604134 111 ntBASIC1.9□□□□□ -2.11
BRF1Q92994 MIR502-201ENST00000606349 86 ntBASIC1.9□□□□□ -2.11
BRF1Q92994 Y_RNA.93-201ENST00000363066 109 ntBASIC1.89□□□□□ -2.11
BRF1Q92994 SNORA7.5-201ENST00000410672 110 ntBASIC1.89□□□□□ -2.11
BRF1Q92994 AC008834.1-201ENST00000511612 175 ntBASIC1.89□□□□□ -2.11
BRF1Q92994 RNU7-79P-201ENST00000516082 62 ntBASIC1.89□□□□□ -2.11
BRF1Q92994 RNU6-109P-201ENST00000516364 107 ntBASIC1.89□□□□□ -2.11
BRF1Q92994 RNU6-184P-201ENST00000516514 107 ntBASIC1.89□□□□□ -2.11
BRF1Q92994 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.89□□□□□ -2.11
BRF1Q92994 MIR2052-201ENST00000636055 55 ntBASIC1.89□□□□□ -2.11
BRF1Q92994 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
BRF1Q92994 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
BRF1Q92994 RNU6-1313P-201ENST00000362622 102 ntBASIC1.88□□□□□ -2.11
BRF1Q92994 RNU6-396P-201ENST00000365369 105 ntBASIC1.88□□□□□ -2.11
BRF1Q92994 Y_RNA.369-201ENST00000365568 117 ntBASIC1.88□□□□□ -2.11
BRF1Q92994 MIR676-201ENST00000390702 67 ntBASIC1.88□□□□□ -2.11
BRF1Q92994 RNU1-78P-201ENST00000391248 165 ntBASIC1.88□□□□□ -2.11
BRF1Q92994 RPL31P63-201ENST00000422565 375 ntBASIC1.88□□□□□ -2.11
BRF1Q92994 SCARNA23-201ENST00000516060 130 ntBASIC1.88□□□□□ -2.11
BRF1Q92994 RNU7-2P-201ENST00000516096 62 ntBASIC1.88□□□□□ -2.11
BRF1Q92994 RNU11-2P-201ENST00000516898 142 ntBASIC1.88□□□□□ -2.11
BRF1Q92994 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.88□□□□□ -2.11
BRF1Q92994 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms