Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.02□□□□□ -2.41
UFD1Q92890 SNORA22.1-201ENST00000362701 134 ntBASIC-0.02□□□□□ -2.41
UFD1Q92890 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.02□□□□□ -2.41
UFD1Q92890 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.02□□□□□ -2.41
UFD1Q92890 SNORD114-9-201ENST00000364370 72 ntBASIC-0.02□□□□□ -2.41
UFD1Q92890 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.02□□□□□ -2.41
UFD1Q92890 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.02□□□□□ -2.41
UFD1Q92890 SNORA79-201ENST00000408376 140 ntBASIC-0.02□□□□□ -2.41
UFD1Q92890 RNU6-651P-201ENST00000411040 105 ntBASIC-0.02□□□□□ -2.41
UFD1Q92890 RNA5SP47-201ENST00000517230 109 ntBASIC-0.02□□□□□ -2.41
UFD1Q92890 AC021613.1-201ENST00000623880 111 ntBASIC-0.02□□□□□ -2.41
UFD1Q92890 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.03□□□□□ -2.41
UFD1Q92890 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.03□□□□□ -2.41
UFD1Q92890 RNU6-291P-201ENST00000384720 107 ntBASIC-0.03□□□□□ -2.41
UFD1Q92890 MIR193B-201ENST00000384907 83 ntBASIC-0.03□□□□□ -2.41
UFD1Q92890 RNU6-381P-201ENST00000391259 108 ntBASIC-0.03□□□□□ -2.41
UFD1Q92890 RNU6-561P-201ENST00000516222 102 ntBASIC-0.03□□□□□ -2.41
UFD1Q92890 MIR3171-201ENST00000584270 74 ntBASIC-0.03□□□□□ -2.41
UFD1Q92890 U2.14-201ENST00000615943 113 ntBASIC-0.03□□□□□ -2.41
UFD1Q92890 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
UFD1Q92890 AC091304.10-201ENST00000641554 121 ntBASIC-0.03□□□□□ -2.41
UFD1Q92890 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 RNU6-728P-201ENST00000365375 104 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 SNORD28-201ENST00000384706 75 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 RNU6-535P-201ENST00000384722 107 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 PCNPP3-201ENST00000393579 471 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 TRBVB-201ENST00000477100 408 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 RNU7-70P-201ENST00000516941 66 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.04□□□□□ -2.42
UFD1Q92890 MTND5P34-201ENST00000568888 325 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 MIR4639-201ENST00000584938 69 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 MIR4768-201ENST00000585270 74 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 AC104408.1-201ENST00000605241 170 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 AL365265.1-201ENST00000621045 234 ntBASIC-0.04□□□□□ -2.42
UFD1Q92890 RNU6-187P-201ENST00000384139 106 ntBASIC-0.05□□□□□ -2.42
UFD1Q92890 SNORA18-201ENST00000384416 132 ntBASIC-0.05□□□□□ -2.42
UFD1Q92890 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.05□□□□□ -2.42
UFD1Q92890 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.05□□□□□ -2.42
UFD1Q92890 AC020661.2-201ENST00000560114 134 ntBASIC-0.05□□□□□ -2.42
UFD1Q92890 MIR4667-201ENST00000578933 66 ntBASIC-0.05□□□□□ -2.42
UFD1Q92890 AC023932.2-201ENST00000603176 175 ntBASIC-0.05□□□□□ -2.42
UFD1Q92890 RNY1P13-201ENST00000365030 105 ntBASIC-0.06□□□□□ -2.42
UFD1Q92890 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.06□□□□□ -2.42
UFD1Q92890 RNU4-43P-201ENST00000410628 137 ntBASIC-0.06□□□□□ -2.42
UFD1Q92890 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.06□□□□□ -2.42
UFD1Q92890 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.06□□□□□ -2.42
UFD1Q92890 SNORA25.16-201ENST00000516741 121 ntBASIC-0.06□□□□□ -2.42
UFD1Q92890 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.06□□□□□ -2.42
UFD1Q92890 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.06□□□□□ -2.42
UFD1Q92890 AL442663.2-201ENST00000554385 511 ntBASIC-0.06□□□□□ -2.42
UFD1Q92890 AL442067.1-201ENST00000613261 223 ntBASIC-0.06□□□□□ -2.42
UFD1Q92890 MIR6718-201ENST00000616153 80 ntBASIC-0.06□□□□□ -2.42
UFD1Q92890 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.06□□□□□ -2.42
UFD1Q92890 MIR411-201ENST00000362239 96 ntBASIC-0.07□□□□□ -2.42
UFD1Q92890 RNU4-17P-201ENST00000365598 141 ntBASIC-0.07□□□□□ -2.42
UFD1Q92890 RNU6-985P-201ENST00000410182 104 ntBASIC-0.07□□□□□ -2.42
UFD1Q92890 RNU6-848P-201ENST00000515948 107 ntBASIC-0.07□□□□□ -2.42
UFD1Q92890 RNU6-617P-201ENST00000516147 107 ntBASIC-0.07□□□□□ -2.42
UFD1Q92890 RNU6-473P-201ENST00000516164 107 ntBASIC-0.07□□□□□ -2.42
UFD1Q92890 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.07□□□□□ -2.42
UFD1Q92890 MIR4282-201ENST00000583613 67 ntBASIC-0.07□□□□□ -2.42
UFD1Q92890 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.08□□□□□ -2.42
UFD1Q92890 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.08□□□□□ -2.42
UFD1Q92890 MTND4LP11-201ENST00000422184 280 ntBASIC-0.08□□□□□ -2.42
UFD1Q92890 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.08□□□□□ -2.42
UFD1Q92890 RNU7-129P-201ENST00000516128 62 ntBASIC-0.08□□□□□ -2.42
UFD1Q92890 MIR4290-201ENST00000583807 95 ntBASIC-0.08□□□□□ -2.42
UFD1Q92890 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.08□□□□□ -2.42
UFD1Q92890 AC244669.1-204ENST00000621564 178 ntBASIC-0.08□□□□□ -2.42
UFD1Q92890 MIR335-201ENST00000362173 94 ntBASIC-0.09□□□□□ -2.42
UFD1Q92890 SNORD114-5-201ENST00000362928 70 ntBASIC-0.09□□□□□ -2.42
UFD1Q92890 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.09□□□□□ -2.42
UFD1Q92890 RNU4-16P-201ENST00000364737 141 ntBASIC-0.09□□□□□ -2.42
UFD1Q92890 RNU6-716P-201ENST00000365621 103 ntBASIC-0.09□□□□□ -2.42
UFD1Q92890 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.09□□□□□ -2.42
UFD1Q92890 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.09□□□□□ -2.42
UFD1Q92890 MIR613-201ENST00000385248 95 ntBASIC-0.09□□□□□ -2.42
UFD1Q92890 MIR760-201ENST00000390220 80 ntBASIC-0.09□□□□□ -2.42
UFD1Q92890 RNU6-127P-201ENST00000390897 107 ntBASIC-0.09□□□□□ -2.42
UFD1Q92890 AL358176.2-201ENST00000425769 204 ntBASIC-0.09□□□□□ -2.42
UFD1Q92890 RNU6-893P-201ENST00000458841 100 ntBASIC-0.09□□□□□ -2.42
UFD1Q92890 SNORD116-25-201ENST00000516517 92 ntBASIC-0.09□□□□□ -2.42
UFD1Q92890 SCARNA15-202ENST00000516881 127 ntBASIC-0.09□□□□□ -2.42
UFD1Q92890 MIR1273G-201ENST00000577677 100 ntBASIC-0.09□□□□□ -2.42
UFD1Q92890 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.1□□□□□ -2.43
UFD1Q92890 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.1□□□□□ -2.43
UFD1Q92890 RNU6-103P-201ENST00000363686 107 ntBASIC-0.1□□□□□ -2.43
UFD1Q92890 RNU6-978P-201ENST00000364371 103 ntBASIC-0.1□□□□□ -2.43
UFD1Q92890 RNU6-713P-201ENST00000384761 107 ntBASIC-0.1□□□□□ -2.43
UFD1Q92890 MIR610-201ENST00000385139 96 ntBASIC-0.1□□□□□ -2.43
UFD1Q92890 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 406.1 ms