Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC068338.1-201ENST00000565567 176 ntBASIC1.42□□□□□ -2.18
ATG4AQ8WYN0 PRELID3BP2-201ENST00000605362 201 ntBASIC1.42□□□□□ -2.18
ATG4AQ8WYN0 Y_RNA.171-201ENST00000363760 102 ntBASIC1.41□□□□□ -2.18
ATG4AQ8WYN0 Y_RNA.198-201ENST00000364013 98 ntBASIC1.41□□□□□ -2.18
ATG4AQ8WYN0 RNU6-396P-201ENST00000365369 105 ntBASIC1.41□□□□□ -2.18
ATG4AQ8WYN0 Y_RNA.531-201ENST00000384589 121 ntBASIC1.41□□□□□ -2.18
ATG4AQ8WYN0 SNORD38B-201ENST00000384690 67 ntBASIC1.41□□□□□ -2.18
ATG4AQ8WYN0 MIR1185-1-201ENST00000408598 86 ntBASIC1.41□□□□□ -2.18
ATG4AQ8WYN0 AL512326.2-201ENST00000426359 151 ntBASIC1.41□□□□□ -2.18
ATG4AQ8WYN0 RNU7-113P-201ENST00000459273 62 ntBASIC1.41□□□□□ -2.18
ATG4AQ8WYN0 AC113410.1-201ENST00000505029 247 ntBASIC1.41□□□□□ -2.18
ATG4AQ8WYN0 RNU11-2P-201ENST00000516898 142 ntBASIC1.41□□□□□ -2.18
ATG4AQ8WYN0 RNU6-1258P-201ENST00000516911 111 ntBASIC1.41□□□□□ -2.18
ATG4AQ8WYN0 MIR4303-201ENST00000581299 66 ntBASIC1.41□□□□□ -2.18
ATG4AQ8WYN0 SNORD38B-202ENST00000625943 69 ntBASIC1.41□□□□□ -2.18
ATG4AQ8WYN0 MIR378A-201ENST00000362177 66 ntBASIC1.4□□□□□ -2.19
ATG4AQ8WYN0 RNU6-834P-201ENST00000362367 110 ntBASIC1.4□□□□□ -2.19
ATG4AQ8WYN0 Y_RNA.213-201ENST00000364178 111 ntBASIC1.4□□□□□ -2.19
ATG4AQ8WYN0 SNORA67.5-201ENST00000391036 107 ntBASIC1.4□□□□□ -2.19
ATG4AQ8WYN0 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.19
ATG4AQ8WYN0 AC048334.1-201ENST00000477975 159 ntBASIC1.4□□□□□ -2.19
ATG4AQ8WYN0 MIR2115-201ENST00000516657 100 ntBASIC1.4□□□□□ -2.19
ATG4AQ8WYN0 AC022523.2-201ENST00000561045 150 ntBASIC1.4□□□□□ -2.19
ATG4AQ8WYN0 SNORD115-2-201ENST00000362842 82 ntBASIC1.39□□□□□ -2.19
ATG4AQ8WYN0 Y_RNA.273-201ENST00000364703 102 ntBASIC1.39□□□□□ -2.19
ATG4AQ8WYN0 SNORD115-20-201ENST00000365099 82 ntBASIC1.39□□□□□ -2.19
ATG4AQ8WYN0 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
ATG4AQ8WYN0 RNU6-735P-201ENST00000410612 107 ntBASIC1.39□□□□□ -2.19
ATG4AQ8WYN0 Y_RNA.629-201ENST00000411368 105 ntBASIC1.39□□□□□ -2.19
ATG4AQ8WYN0 RPS23P4-201ENST00000487908 423 ntBASIC1.39□□□□□ -2.19
ATG4AQ8WYN0 SNORA31.2-201ENST00000516019 134 ntBASIC1.39□□□□□ -2.19
ATG4AQ8WYN0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.39□□□□□ -2.19
ATG4AQ8WYN0 AL670379.3-201ENST00000605040 251 ntBASIC1.39□□□□□ -2.19
ATG4AQ8WYN0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
ATG4AQ8WYN0 RNU6-1290P-201ENST00000362957 109 ntBASIC1.38□□□□□ -2.19
ATG4AQ8WYN0 Y_RNA.470-201ENST00000384307 117 ntBASIC1.38□□□□□ -2.19
ATG4AQ8WYN0 RNU6-1104P-201ENST00000384723 104 ntBASIC1.38□□□□□ -2.19
ATG4AQ8WYN0 MIR759-201ENST00000390224 91 ntBASIC1.38□□□□□ -2.19
ATG4AQ8WYN0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.38□□□□□ -2.19
ATG4AQ8WYN0 Y_RNA.299-201ENST00000364973 94 ntBASIC1.37□□□□□ -2.19
ATG4AQ8WYN0 RNU6-476P-201ENST00000384726 107 ntBASIC1.37□□□□□ -2.19
ATG4AQ8WYN0 MIR548A3-201ENST00000385297 97 ntBASIC1.37□□□□□ -2.19
ATG4AQ8WYN0 MT-TN-201ENST00000387400 73 ntBASIC1.37□□□□□ -2.19
ATG4AQ8WYN0 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
ATG4AQ8WYN0 RNU6-1064P-201ENST00000410626 104 ntBASIC1.37□□□□□ -2.19
ATG4AQ8WYN0 Y_RNA.649-201ENST00000459077 103 ntBASIC1.37□□□□□ -2.19
ATG4AQ8WYN0 RNA5SP33-201ENST00000516687 98 ntBASIC1.37□□□□□ -2.19
ATG4AQ8WYN0 MIR4498-201ENST00000577599 66 ntBASIC1.37□□□□□ -2.19
ATG4AQ8WYN0 MIR4264-201ENST00000583520 66 ntBASIC1.37□□□□□ -2.19
ATG4AQ8WYN0 MIR6516-201ENST00000630554 81 ntBASIC1.37□□□□□ -2.19
ATG4AQ8WYN0 RNU6-1056P-201ENST00000383996 107 ntBASIC1.36□□□□□ -2.19
ATG4AQ8WYN0 RNU6-1144P-201ENST00000384247 104 ntBASIC1.36□□□□□ -2.19
ATG4AQ8WYN0 SNORD12C-201ENST00000386307 89 ntBASIC1.36□□□□□ -2.19
ATG4AQ8WYN0 MT-TI-201ENST00000387365 69 ntBASIC1.36□□□□□ -2.19
ATG4AQ8WYN0 RNU4-62P-201ENST00000410125 130 ntBASIC1.36□□□□□ -2.19
ATG4AQ8WYN0 RNU6-613P-201ENST00000410412 108 ntBASIC1.36□□□□□ -2.19
ATG4AQ8WYN0 AC244023.1-201ENST00000426884 112 ntBASIC1.36□□□□□ -2.19
ATG4AQ8WYN0 RNU1-123P-201ENST00000458950 160 ntBASIC1.36□□□□□ -2.19
ATG4AQ8WYN0 AC004223.1-201ENST00000479840 271 ntBASIC1.36□□□□□ -2.19
ATG4AQ8WYN0 Y_RNA.676-201ENST00000516393 96 ntBASIC1.36□□□□□ -2.19
ATG4AQ8WYN0 MTND5P34-201ENST00000568888 325 ntBASIC1.36□□□□□ -2.19
ATG4AQ8WYN0 MIR3163-201ENST00000581592 73 ntBASIC1.36□□□□□ -2.19
ATG4AQ8WYN0 AP000753.3-201ENST00000604083 169 ntBASIC1.36□□□□□ -2.19
ATG4AQ8WYN0 AC242498.1-201ENST00000604134 111 ntBASIC1.36□□□□□ -2.19
ATG4AQ8WYN0 snoU13.31-201ENST00000607291 104 ntBASIC1.36□□□□□ -2.19
ATG4AQ8WYN0 MIR377-201ENST00000362145 69 ntBASIC1.35□□□□□ -2.19
ATG4AQ8WYN0 RNU4-69P-201ENST00000410677 143 ntBASIC1.35□□□□□ -2.19
ATG4AQ8WYN0 BTF3P4-201ENST00000418852 495 ntBASIC1.35□□□□□ -2.19
ATG4AQ8WYN0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.35□□□□□ -2.19
ATG4AQ8WYN0 MIR548AE2-201ENST00000583456 67 ntBASIC1.35□□□□□ -2.19
ATG4AQ8WYN0 SEPT14P17-201ENST00000617978 177 ntBASIC1.35□□□□□ -2.19
ATG4AQ8WYN0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
ATG4AQ8WYN0 AL161722.3-201ENST00000605789 2983 ntBASIC1.35□□□□□ -2.19
ATG4AQ8WYN0 RNU6-654P-201ENST00000364373 107 ntBASIC1.34□□□□□ -2.19
ATG4AQ8WYN0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.34□□□□□ -2.19
ATG4AQ8WYN0 AL512598.1-201ENST00000610158 273 ntBASIC1.34□□□□□ -2.19
ATG4AQ8WYN0 RNY4P6-201ENST00000363667 96 ntBASIC1.33□□□□□ -2.2
ATG4AQ8WYN0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.33□□□□□ -2.2
ATG4AQ8WYN0 SNORA18-201ENST00000384416 132 ntBASIC1.33□□□□□ -2.2
ATG4AQ8WYN0 RNU6-342P-201ENST00000384521 104 ntBASIC1.33□□□□□ -2.2
ATG4AQ8WYN0 SNORA75.2-201ENST00000391138 150 ntBASIC1.33□□□□□ -2.2
ATG4AQ8WYN0 SNORA75.3-201ENST00000391231 150 ntBASIC1.33□□□□□ -2.2
ATG4AQ8WYN0 snoU13.2-201ENST00000459201 104 ntBASIC1.33□□□□□ -2.2
ATG4AQ8WYN0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.33□□□□□ -2.2
ATG4AQ8WYN0 SNORD116-21-201ENST00000384507 92 ntBASIC1.32□□□□□ -2.2
ATG4AQ8WYN0 MIR548A1-201ENST00000385041 97 ntBASIC1.32□□□□□ -2.2
ATG4AQ8WYN0 RNU6-910P-201ENST00000390844 107 ntBASIC1.32□□□□□ -2.2
ATG4AQ8WYN0 RNU6-205P-201ENST00000390858 107 ntBASIC1.32□□□□□ -2.2
ATG4AQ8WYN0 AP1B1P2-201ENST00000416196 106 ntBASIC1.32□□□□□ -2.2
ATG4AQ8WYN0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.32□□□□□ -2.2
ATG4AQ8WYN0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.32□□□□□ -2.2
ATG4AQ8WYN0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
ATG4AQ8WYN0 ZNF209P-201ENST00000593450 2304 ntBASIC1.31□□□□□ -2.2
ATG4AQ8WYN0 Y_RNA.164-201ENST00000363709 102 ntBASIC1.31□□□□□ -2.2
ATG4AQ8WYN0 SNORA32-201ENST00000384072 121 ntBASIC1.31□□□□□ -2.2
ATG4AQ8WYN0 SNORA80D-201ENST00000384488 135 ntBASIC1.31□□□□□ -2.2
ATG4AQ8WYN0 RNU6-880P-201ENST00000384526 107 ntBASIC1.31□□□□□ -2.2
ATG4AQ8WYN0 MIR588-201ENST00000384900 83 ntBASIC1.31□□□□□ -2.2
ATG4AQ8WYN0 MIR548D2-201ENST00000384955 97 ntBASIC1.31□□□□□ -2.2
ATG4AQ8WYN0 SNORD77B-201ENST00000391112 67 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms