Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
NKX2-3Q8TAU0 RNU6-208P-201ENST00000362431 107 ntBASIC3.19□□□□□ -1.9
NKX2-3Q8TAU0 RNU6-571P-201ENST00000384128 107 ntBASIC3.19□□□□□ -1.9
NKX2-3Q8TAU0 SNORA72.6-201ENST00000384520 129 ntBASIC3.19□□□□□ -1.9
NKX2-3Q8TAU0 RNA5SP21-201ENST00000410917 96 ntBASIC3.19□□□□□ -1.9
NKX2-3Q8TAU0 RNA5SP344-201ENST00000411081 104 ntBASIC3.19□□□□□ -1.9
NKX2-3Q8TAU0 AC244636.1-201ENST00000421152 228 ntBASIC3.19□□□□□ -1.9
NKX2-3Q8TAU0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.19□□□□□ -1.9
NKX2-3Q8TAU0 RNA5SP148-201ENST00000516527 94 ntBASIC3.19□□□□□ -1.9
NKX2-3Q8TAU0 RNU6-850P-201ENST00000516934 103 ntBASIC3.19□□□□□ -1.9
NKX2-3Q8TAU0 AC015712.3-201ENST00000559380 164 ntBASIC3.19□□□□□ -1.9
NKX2-3Q8TAU0 CYP3A52P-201ENST00000563326 91 ntBASIC3.19□□□□□ -1.9
NKX2-3Q8TAU0 AC067747.1-201ENST00000608026 250 ntBASIC3.19□□□□□ -1.9
NKX2-3Q8TAU0 WWP1P1-201ENST00000466609 2769 ntBASIC3.18□□□□□ -1.9
NKX2-3Q8TAU0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-3Q8TAU0 MIR154-201ENST00000385243 84 ntBASIC3.18□□□□□ -1.9
NKX2-3Q8TAU0 AC023790.1-201ENST00000482174 347 ntBASIC3.18□□□□□ -1.9
NKX2-3Q8TAU0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3.18□□□□□ -1.9
NKX2-3Q8TAU0 NEAT1_2.1-201ENST00000620525 105 ntBASIC3.18□□□□□ -1.9
NKX2-3Q8TAU0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-3Q8TAU0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-3Q8TAU0 MIR526A1-201ENST00000384897 85 ntBASIC3.17□□□□□ -1.9
NKX2-3Q8TAU0 RNU6-205P-201ENST00000390858 107 ntBASIC3.17□□□□□ -1.9
NKX2-3Q8TAU0 AC015818.7-201ENST00000428754 109 ntBASIC3.17□□□□□ -1.9
NKX2-3Q8TAU0 AC108210.2-201ENST00000503681 201 ntBASIC3.17□□□□□ -1.9
NKX2-3Q8TAU0 SNORA74.3-201ENST00000517108 154 ntBASIC3.17□□□□□ -1.9
NKX2-3Q8TAU0 RNU7-156P-201ENST00000517214 74 ntBASIC3.17□□□□□ -1.9
NKX2-3Q8TAU0 AC141846.1-201ENST00000568348 142 ntBASIC3.17□□□□□ -1.9
NKX2-3Q8TAU0 YWHAEP2-201ENST00000580066 112 ntBASIC3.17□□□□□ -1.9
NKX2-3Q8TAU0 AC090897.1-201ENST00000580909 226 ntBASIC3.17□□□□□ -1.9
NKX2-3Q8TAU0 MIR3064-201ENST00000581130 66 ntBASIC3.17□□□□□ -1.9
NKX2-3Q8TAU0 YWHAEP3-201ENST00000582767 121 ntBASIC3.17□□□□□ -1.9
NKX2-3Q8TAU0 AC104996.3-201ENST00000590718 94 ntBASIC3.17□□□□□ -1.9
NKX2-3Q8TAU0 AC005520.4-201ENST00000604337 90 ntBASIC3.17□□□□□ -1.9
NKX2-3Q8TAU0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.16□□□□□ -1.9
NKX2-3Q8TAU0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NKX2-3Q8TAU0 AC104389.3-201ENST00000445629 235 ntBASIC3.16□□□□□ -1.9
NKX2-3Q8TAU0 HSPE1P24-201ENST00000450782 238 ntBASIC3.16□□□□□ -1.9
NKX2-3Q8TAU0 AL513423.1-201ENST00000621695 132 ntBASIC3.16□□□□□ -1.9
NKX2-3Q8TAU0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NKX2-3Q8TAU0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NKX2-3Q8TAU0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.15□□□□□ -1.91
NKX2-3Q8TAU0 SNORD115-31-201ENST00000365318 82 ntBASIC3.15□□□□□ -1.91
NKX2-3Q8TAU0 MIR548U-201ENST00000390728 81 ntBASIC3.15□□□□□ -1.91
NKX2-3Q8TAU0 RNA5SP425-201ENST00000410336 112 ntBASIC3.15□□□□□ -1.91
NKX2-3Q8TAU0 AL603825.1-201ENST00000438481 80 ntBASIC3.15□□□□□ -1.91
NKX2-3Q8TAU0 RNU7-43P-201ENST00000516554 64 ntBASIC3.15□□□□□ -1.91
NKX2-3Q8TAU0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NKX2-3Q8TAU0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NKX2-3Q8TAU0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NKX2-3Q8TAU0 RNU1-109P-201ENST00000383960 147 ntBASIC3.14□□□□□ -1.91
NKX2-3Q8TAU0 Y_RNA.491-201ENST00000384417 107 ntBASIC3.14□□□□□ -1.91
NKX2-3Q8TAU0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.14□□□□□ -1.91
NKX2-3Q8TAU0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX2-3Q8TAU0 AC005908.1-201ENST00000468701 347 ntBASIC3.14□□□□□ -1.91
NKX2-3Q8TAU0 SCARNA16.3-201ENST00000516595 184 ntBASIC3.14□□□□□ -1.91
NKX2-3Q8TAU0 AC026271.5-201ENST00000577873 130 ntBASIC3.14□□□□□ -1.91
NKX2-3Q8TAU0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.14□□□□□ -1.91
NKX2-3Q8TAU0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 MIR26A1-201ENST00000362205 77 ntBASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 Y_RNA.12-201ENST00000362393 112 ntBASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 RNU1-58P-201ENST00000362413 163 ntBASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 Y_RNA.36-201ENST00000362602 112 ntBASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 RNU6-949P-201ENST00000384040 107 ntBASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 SNORD38B-201ENST00000384690 67 ntBASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 RNU6-1237P-201ENST00000384777 107 ntBASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 MIR660-201ENST00000385235 97 ntBASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 MIR942-201ENST00000401111 86 ntBASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 RNA5SP237-201ENST00000410414 113 ntBASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 RPS27P21-201ENST00000486977 252 ntBASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 RNU6-75P-201ENST00000515944 104 ntBASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 SNORD92-201ENST00000585078 85 ntBASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 SNORD38B-202ENST00000625943 69 ntBASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-3Q8TAU0 SNORD36A-201ENST00000362874 73 ntBASIC3.12□□□□□ -1.91
NKX2-3Q8TAU0 RNU6-132P-201ENST00000383863 107 ntBASIC3.12□□□□□ -1.91
NKX2-3Q8TAU0 SNORA8.1-201ENST00000384250 140 ntBASIC3.12□□□□□ -1.91
NKX2-3Q8TAU0 RNA5SP247-201ENST00000411181 105 ntBASIC3.12□□□□□ -1.91
NKX2-3Q8TAU0 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.12□□□□□ -1.91
NKX2-3Q8TAU0 MIR4500-201ENST00000579472 76 ntBASIC3.12□□□□□ -1.91
NKX2-3Q8TAU0 MIR4648-201ENST00000580107 72 ntBASIC3.12□□□□□ -1.91
NKX2-3Q8TAU0 MIR3605-201ENST00000583214 100 ntBASIC3.12□□□□□ -1.91
NKX2-3Q8TAU0 AL662814.1-201ENST00000617364 121 ntBASIC3.12□□□□□ -1.91
NKX2-3Q8TAU0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NKX2-3Q8TAU0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.12□□□□□ -1.91
NKX2-3Q8TAU0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX2-3Q8TAU0 AP000648.3-201ENST00000623539 4507 ntBASIC3.11□□□□□ -1.91
NKX2-3Q8TAU0 MIR9-2-201ENST00000384838 87 ntBASIC3.11□□□□□ -1.91
NKX2-3Q8TAU0 MIR29C-201ENST00000385231 88 ntBASIC3.11□□□□□ -1.91
NKX2-3Q8TAU0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NKX2-3Q8TAU0 AL023284.1-201ENST00000403956 276 ntBASIC3.11□□□□□ -1.91
NKX2-3Q8TAU0 AL591806.2-201ENST00000433122 173 ntBASIC3.11□□□□□ -1.91
NKX2-3Q8TAU0 RNU6-548P-201ENST00000517083 115 ntBASIC3.11□□□□□ -1.91
NKX2-3Q8TAU0 AC138749.4-201ENST00000563970 127 ntBASIC3.11□□□□□ -1.91
NKX2-3Q8TAU0 MIR4635-201ENST00000583759 79 ntBASIC3.11□□□□□ -1.91
NKX2-3Q8TAU0 AC008133.2-201ENST00000624540 351 ntBASIC3.11□□□□□ -1.91
NKX2-3Q8TAU0 Y_RNA.283-201ENST00000364798 112 ntBASIC3.1□□□□□ -1.91
NKX2-3Q8TAU0 RN7SL499P-201ENST00000481141 276 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms