Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 MIR548AO-201ENST00000579992 96 ntBASIC2.21□□□□□ -2.06
ATG4DQ86TL0 SNORD14A-201ENST00000606526 91 ntBASIC2.21□□□□□ -2.06
ATG4DQ86TL0 AL513423.1-201ENST00000621695 132 ntBASIC2.21□□□□□ -2.06
ATG4DQ86TL0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ATG4DQ86TL0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.21□□□□□ -2.06
ATG4DQ86TL0 AC016717.2-201ENST00000609089 5141 ntBASIC2.2□□□□□ -2.06
ATG4DQ86TL0 HMGN2P3-201ENST00000433603 273 ntBASIC2.2□□□□□ -2.06
ATG4DQ86TL0 HMGN2P5-201ENST00000436882 273 ntBASIC2.2□□□□□ -2.06
ATG4DQ86TL0 AC027119.1-201ENST00000440877 241 ntBASIC2.2□□□□□ -2.06
ATG4DQ86TL0 RNU7-85P-201ENST00000458851 63 ntBASIC2.2□□□□□ -2.06
ATG4DQ86TL0 snoU13.11-201ENST00000459219 104 ntBASIC2.2□□□□□ -2.06
ATG4DQ86TL0 MIR4709-201ENST00000577272 72 ntBASIC2.2□□□□□ -2.06
ATG4DQ86TL0 AC067747.1-201ENST00000608026 250 ntBASIC2.2□□□□□ -2.06
ATG4DQ86TL0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.2□□□□□ -2.06
ATG4DQ86TL0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.2□□□□□ -2.06
ATG4DQ86TL0 MIR8066-201ENST00000617280 78 ntBASIC2.2□□□□□ -2.06
ATG4DQ86TL0 AC008133.2-201ENST00000624540 351 ntBASIC2.2□□□□□ -2.06
ATG4DQ86TL0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
ATG4DQ86TL0 AC008163.1-202ENST00000636004 2889 ntBASIC2.2□□□□□ -2.06
ATG4DQ86TL0 HSBP1P2-201ENST00000299671 229 ntBASIC2.19□□□□□ -2.06
ATG4DQ86TL0 MIR21-201ENST00000362134 72 ntBASIC2.19□□□□□ -2.06
ATG4DQ86TL0 Y_RNA.508-201ENST00000384502 114 ntBASIC2.19□□□□□ -2.06
ATG4DQ86TL0 MIR520A-201ENST00000384862 85 ntBASIC2.19□□□□□ -2.06
ATG4DQ86TL0 MIR1283-2-201ENST00000408621 87 ntBASIC2.19□□□□□ -2.06
ATG4DQ86TL0 RNA5SP181-201ENST00000410246 98 ntBASIC2.19□□□□□ -2.06
ATG4DQ86TL0 RNA5SP508-201ENST00000411327 119 ntBASIC2.19□□□□□ -2.06
ATG4DQ86TL0 RNA5SP82-201ENST00000516707 92 ntBASIC2.19□□□□□ -2.06
ATG4DQ86TL0 AC133485.1-201ENST00000567176 124 ntBASIC2.19□□□□□ -2.06
ATG4DQ86TL0 MIR3126-201ENST00000577443 74 ntBASIC2.19□□□□□ -2.06
ATG4DQ86TL0 MIR4764-201ENST00000580680 88 ntBASIC2.19□□□□□ -2.06
ATG4DQ86TL0 AC090897.1-201ENST00000580909 226 ntBASIC2.19□□□□□ -2.06
ATG4DQ86TL0 MIR4435-1-201ENST00000582552 80 ntBASIC2.19□□□□□ -2.06
ATG4DQ86TL0 MIR1291-201ENST00000627649 87 ntBASIC2.19□□□□□ -2.06
ATG4DQ86TL0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
ATG4DQ86TL0 MIRLET7A1-201ENST00000362295 80 ntBASIC2.18□□□□□ -2.06
ATG4DQ86TL0 RNU6-161P-201ENST00000363051 106 ntBASIC2.18□□□□□ -2.06
ATG4DQ86TL0 RPS29P11-201ENST00000496507 171 ntBASIC2.18□□□□□ -2.06
ATG4DQ86TL0 RNA5SP445-201ENST00000515889 115 ntBASIC2.18□□□□□ -2.06
ATG4DQ86TL0 AC141846.1-201ENST00000568348 142 ntBASIC2.18□□□□□ -2.06
ATG4DQ86TL0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
ATG4DQ86TL0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ATG4DQ86TL0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
ATG4DQ86TL0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
ATG4DQ86TL0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.17□□□□□ -2.06
ATG4DQ86TL0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
ATG4DQ86TL0 SNORA63.2-201ENST00000362603 126 ntBASIC2.17□□□□□ -2.06
ATG4DQ86TL0 SNORA67.1-201ENST00000364749 141 ntBASIC2.17□□□□□ -2.06
ATG4DQ86TL0 RNA5SP237-201ENST00000410414 113 ntBASIC2.17□□□□□ -2.06
ATG4DQ86TL0 AC011753.1-201ENST00000451001 220 ntBASIC2.17□□□□□ -2.06
ATG4DQ86TL0 snoU13.27-201ENST00000459278 104 ntBASIC2.17□□□□□ -2.06
ATG4DQ86TL0 AC023790.1-201ENST00000482174 347 ntBASIC2.17□□□□□ -2.06
ATG4DQ86TL0 RPS27P21-201ENST00000486977 252 ntBASIC2.17□□□□□ -2.06
ATG4DQ86TL0 RNU6-1108P-201ENST00000516308 104 ntBASIC2.17□□□□□ -2.06
ATG4DQ86TL0 MIR3945-201ENST00000581853 98 ntBASIC2.17□□□□□ -2.06
ATG4DQ86TL0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ATG4DQ86TL0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ATG4DQ86TL0 RNU6-112P-201ENST00000363599 104 ntBASIC2.16□□□□□ -2.06
ATG4DQ86TL0 RNU6-686P-201ENST00000364839 107 ntBASIC2.16□□□□□ -2.06
ATG4DQ86TL0 RNU1-148P-201ENST00000384472 162 ntBASIC2.16□□□□□ -2.06
ATG4DQ86TL0 RNU6-296P-201ENST00000384608 107 ntBASIC2.16□□□□□ -2.06
ATG4DQ86TL0 SNORD38B-201ENST00000384690 67 ntBASIC2.16□□□□□ -2.06
ATG4DQ86TL0 MIR520C-201ENST00000385005 87 ntBASIC2.16□□□□□ -2.06
ATG4DQ86TL0 AL023284.1-201ENST00000403956 276 ntBASIC2.16□□□□□ -2.06
ATG4DQ86TL0 AC026436.1-201ENST00000510537 270 ntBASIC2.16□□□□□ -2.06
ATG4DQ86TL0 RNU7-43P-201ENST00000516554 64 ntBASIC2.16□□□□□ -2.06
ATG4DQ86TL0 MIR4500-201ENST00000579472 76 ntBASIC2.16□□□□□ -2.06
ATG4DQ86TL0 MIR4796-201ENST00000580742 81 ntBASIC2.16□□□□□ -2.06
ATG4DQ86TL0 MIR4484-201ENST00000582855 83 ntBASIC2.16□□□□□ -2.06
ATG4DQ86TL0 SNORD38B-202ENST00000625943 69 ntBASIC2.16□□□□□ -2.06
ATG4DQ86TL0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ATG4DQ86TL0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
ATG4DQ86TL0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
ATG4DQ86TL0 RNU6-539P-201ENST00000516665 103 ntBASIC2.15□□□□□ -2.07
ATG4DQ86TL0 RNU6-557P-201ENST00000516842 110 ntBASIC2.15□□□□□ -2.07
ATG4DQ86TL0 RNU6-850P-201ENST00000516934 103 ntBASIC2.15□□□□□ -2.07
ATG4DQ86TL0 SUB1P4-201ENST00000566062 339 ntBASIC2.15□□□□□ -2.07
ATG4DQ86TL0 MIR5194-201ENST00000582634 120 ntBASIC2.15□□□□□ -2.07
ATG4DQ86TL0 AP000753.3-201ENST00000604083 169 ntBASIC2.15□□□□□ -2.07
ATG4DQ86TL0 AL512598.1-201ENST00000610158 273 ntBASIC2.15□□□□□ -2.07
ATG4DQ86TL0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
ATG4DQ86TL0 AL161722.3-201ENST00000605789 2983 ntBASIC2.14□□□□□ -2.07
ATG4DQ86TL0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.14□□□□□ -2.07
ATG4DQ86TL0 MIR424-201ENST00000362227 98 ntBASIC2.14□□□□□ -2.07
ATG4DQ86TL0 RNY1P2-201ENST00000364820 117 ntBASIC2.14□□□□□ -2.07
ATG4DQ86TL0 RNU1-51P-201ENST00000365345 176 ntBASIC2.14□□□□□ -2.07
ATG4DQ86TL0 RNA5SP292-201ENST00000390974 118 ntBASIC2.14□□□□□ -2.07
ATG4DQ86TL0 SNORA3.2-201ENST00000408221 125 ntBASIC2.14□□□□□ -2.07
ATG4DQ86TL0 AC005908.1-201ENST00000468701 347 ntBASIC2.14□□□□□ -2.07
ATG4DQ86TL0 RNU6-1015P-201ENST00000517121 99 ntBASIC2.14□□□□□ -2.07
ATG4DQ86TL0 SNORD53-201ENST00000579969 78 ntBASIC2.14□□□□□ -2.07
ATG4DQ86TL0 AC046143.2-201ENST00000609789 160 ntBASIC2.14□□□□□ -2.07
ATG4DQ86TL0 AL662814.1-201ENST00000617364 121 ntBASIC2.14□□□□□ -2.07
ATG4DQ86TL0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.14□□□□□ -2.07
ATG4DQ86TL0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
ATG4DQ86TL0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.13□□□□□ -2.07
ATG4DQ86TL0 SNORA38-201ENST00000363946 132 ntBASIC2.13□□□□□ -2.07
ATG4DQ86TL0 RNU6-411P-201ENST00000384451 107 ntBASIC2.13□□□□□ -2.07
ATG4DQ86TL0 Y_RNA.532-201ENST00000384590 113 ntBASIC2.13□□□□□ -2.07
ATG4DQ86TL0 SNORA48.1-201ENST00000390879 135 ntBASIC2.13□□□□□ -2.07
ATG4DQ86TL0 RNA5SP501-201ENST00000410990 112 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms