Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 Y_RNA.198-201ENST00000364013 98 ntBASIC1.61□□□□□ -2.15
UBE3BQ7Z3V4 RNU6-1056P-201ENST00000383996 107 ntBASIC1.61□□□□□ -2.15
UBE3BQ7Z3V4 RNU6-476P-201ENST00000384726 107 ntBASIC1.61□□□□□ -2.15
UBE3BQ7Z3V4 RNU6-1064P-201ENST00000410626 104 ntBASIC1.61□□□□□ -2.15
UBE3BQ7Z3V4 snoU13.25-201ENST00000458945 104 ntBASIC1.61□□□□□ -2.15
UBE3BQ7Z3V4 AC019176.1-201ENST00000518519 225 ntBASIC1.61□□□□□ -2.15
UBE3BQ7Z3V4 MIR3664-201ENST00000579074 99 ntBASIC1.61□□□□□ -2.15
UBE3BQ7Z3V4 AL670379.3-201ENST00000605040 251 ntBASIC1.61□□□□□ -2.15
UBE3BQ7Z3V4 SNORA22.1-201ENST00000362701 134 ntBASIC1.6□□□□□ -2.15
UBE3BQ7Z3V4 SNORD115-2-201ENST00000362842 82 ntBASIC1.6□□□□□ -2.15
UBE3BQ7Z3V4 SNORD115-20-201ENST00000365099 82 ntBASIC1.6□□□□□ -2.15
UBE3BQ7Z3V4 AL022718.1-201ENST00000412004 84 ntBASIC1.6□□□□□ -2.15
UBE3BQ7Z3V4 HMGN1P33-201ENST00000432945 451 ntBASIC1.6□□□□□ -2.15
UBE3BQ7Z3V4 RNA5SP445-201ENST00000515889 115 ntBASIC1.6□□□□□ -2.15
UBE3BQ7Z3V4 RNU6-970P-201ENST00000516312 107 ntBASIC1.6□□□□□ -2.15
UBE3BQ7Z3V4 AP003716.2-201ENST00000528260 108 ntBASIC1.6□□□□□ -2.15
UBE3BQ7Z3V4 MIR3937-201ENST00000580135 106 ntBASIC1.6□□□□□ -2.15
UBE3BQ7Z3V4 MIR7974-201ENST00000615835 79 ntBASIC1.6□□□□□ -2.15
UBE3BQ7Z3V4 SNORA1.1-201ENST00000364671 133 ntBASIC1.59□□□□□ -2.15
UBE3BQ7Z3V4 RPS3AP1-201ENST00000413190 320 ntBASIC1.59□□□□□ -2.15
UBE3BQ7Z3V4 RPL39P39-201ENST00000455840 151 ntBASIC1.59□□□□□ -2.15
UBE3BQ7Z3V4 RNU6-1258P-201ENST00000516911 111 ntBASIC1.59□□□□□ -2.15
UBE3BQ7Z3V4 RNU6-165P-201ENST00000517170 99 ntBASIC1.59□□□□□ -2.15
UBE3BQ7Z3V4 AC004812.1-201ENST00000540773 146 ntBASIC1.59□□□□□ -2.15
UBE3BQ7Z3V4 AL512310.8-201ENST00000550183 120 ntBASIC1.59□□□□□ -2.15
UBE3BQ7Z3V4 AC068338.1-201ENST00000565567 176 ntBASIC1.59□□□□□ -2.15
UBE3BQ7Z3V4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.58□□□□□ -2.16
UBE3BQ7Z3V4 RNU6-215P-201ENST00000365169 102 ntBASIC1.58□□□□□ -2.16
UBE3BQ7Z3V4 Y_RNA.531-201ENST00000384589 121 ntBASIC1.58□□□□□ -2.16
UBE3BQ7Z3V4 RNU6-1104P-201ENST00000384723 104 ntBASIC1.58□□□□□ -2.16
UBE3BQ7Z3V4 MIR548A3-201ENST00000385297 97 ntBASIC1.58□□□□□ -2.16
UBE3BQ7Z3V4 MIR758-201ENST00000390227 88 ntBASIC1.58□□□□□ -2.16
UBE3BQ7Z3V4 MIR1302-7-201ENST00000408841 72 ntBASIC1.58□□□□□ -2.16
UBE3BQ7Z3V4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.58□□□□□ -2.16
UBE3BQ7Z3V4 RPS27P16-201ENST00000425758 201 ntBASIC1.58□□□□□ -2.16
UBE3BQ7Z3V4 AL512326.2-201ENST00000426359 151 ntBASIC1.58□□□□□ -2.16
UBE3BQ7Z3V4 AL133373.1-201ENST00000497098 94 ntBASIC1.58□□□□□ -2.16
UBE3BQ7Z3V4 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.58□□□□□ -2.16
UBE3BQ7Z3V4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBE3BQ7Z3V4 Y_RNA.213-201ENST00000364178 111 ntBASIC1.57□□□□□ -2.16
UBE3BQ7Z3V4 MT-TI-201ENST00000387365 69 ntBASIC1.57□□□□□ -2.16
UBE3BQ7Z3V4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.57□□□□□ -2.16
UBE3BQ7Z3V4 MIR1287-201ENST00000408492 90 ntBASIC1.57□□□□□ -2.16
UBE3BQ7Z3V4 RNU6-602P-201ENST00000411155 105 ntBASIC1.57□□□□□ -2.16
UBE3BQ7Z3V4 RNU1-98P-201ENST00000458992 160 ntBASIC1.57□□□□□ -2.16
UBE3BQ7Z3V4 Y_RNA.649-201ENST00000459077 103 ntBASIC1.57□□□□□ -2.16
UBE3BQ7Z3V4 AC113410.1-201ENST00000505029 247 ntBASIC1.57□□□□□ -2.16
UBE3BQ7Z3V4 RNU6-902P-201ENST00000517212 91 ntBASIC1.57□□□□□ -2.16
UBE3BQ7Z3V4 MIR6078-201ENST00000611069 100 ntBASIC1.57□□□□□ -2.16
UBE3BQ7Z3V4 MIR8065-201ENST00000620577 100 ntBASIC1.57□□□□□ -2.16
UBE3BQ7Z3V4 AL121890.5-201ENST00000620848 304 ntBASIC1.57□□□□□ -2.16
UBE3BQ7Z3V4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
UBE3BQ7Z3V4 Y_RNA.171-201ENST00000363760 102 ntBASIC1.56□□□□□ -2.16
UBE3BQ7Z3V4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.56□□□□□ -2.16
UBE3BQ7Z3V4 RNU6-429P-201ENST00000384582 108 ntBASIC1.56□□□□□ -2.16
UBE3BQ7Z3V4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
UBE3BQ7Z3V4 AC090844.1-201ENST00000422019 156 ntBASIC1.56□□□□□ -2.16
UBE3BQ7Z3V4 RPS23P4-201ENST00000487908 423 ntBASIC1.56□□□□□ -2.16
UBE3BQ7Z3V4 AC022523.2-201ENST00000561045 150 ntBASIC1.56□□□□□ -2.16
UBE3BQ7Z3V4 CYP3A52P-201ENST00000563326 91 ntBASIC1.56□□□□□ -2.16
UBE3BQ7Z3V4 RNU6-1325P-201ENST00000364905 105 ntBASIC1.55□□□□□ -2.16
UBE3BQ7Z3V4 SNORD20-201ENST00000384550 80 ntBASIC1.55□□□□□ -2.16
UBE3BQ7Z3V4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.55□□□□□ -2.16
UBE3BQ7Z3V4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.55□□□□□ -2.16
UBE3BQ7Z3V4 RNU7-113P-201ENST00000459273 62 ntBASIC1.55□□□□□ -2.16
UBE3BQ7Z3V4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.55□□□□□ -2.16
UBE3BQ7Z3V4 RNU6-947P-201ENST00000516264 106 ntBASIC1.55□□□□□ -2.16
UBE3BQ7Z3V4 MTND5P34-201ENST00000568888 325 ntBASIC1.55□□□□□ -2.16
UBE3BQ7Z3V4 PRELID3BP2-201ENST00000605362 201 ntBASIC1.55□□□□□ -2.16
UBE3BQ7Z3V4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.55□□□□□ -2.16
UBE3BQ7Z3V4 Y_RNA.299-201ENST00000364973 94 ntBASIC1.54□□□□□ -2.16
UBE3BQ7Z3V4 SNORD116-21-201ENST00000384507 92 ntBASIC1.54□□□□□ -2.16
UBE3BQ7Z3V4 RNU6-589P-201ENST00000516485 107 ntBASIC1.54□□□□□ -2.16
UBE3BQ7Z3V4 RNU11-2P-201ENST00000516898 142 ntBASIC1.54□□□□□ -2.16
UBE3BQ7Z3V4 MIR4679-2-201ENST00000578358 77 ntBASIC1.54□□□□□ -2.16
UBE3BQ7Z3V4 MIR6129-201ENST00000616087 109 ntBASIC1.54□□□□□ -2.16
UBE3BQ7Z3V4 RNY4P6-201ENST00000363667 96 ntBASIC1.53□□□□□ -2.16
UBE3BQ7Z3V4 Y_RNA.470-201ENST00000384307 117 ntBASIC1.53□□□□□ -2.16
UBE3BQ7Z3V4 SNORD38B-201ENST00000384690 67 ntBASIC1.53□□□□□ -2.16
UBE3BQ7Z3V4 MIR759-201ENST00000390224 91 ntBASIC1.53□□□□□ -2.16
UBE3BQ7Z3V4 MIR1185-1-201ENST00000408598 86 ntBASIC1.53□□□□□ -2.16
UBE3BQ7Z3V4 AC245047.7-201ENST00000440265 293 ntBASIC1.53□□□□□ -2.16
UBE3BQ7Z3V4 MIR3163-201ENST00000581592 73 ntBASIC1.53□□□□□ -2.16
UBE3BQ7Z3V4 SNORD38B-202ENST00000625943 69 ntBASIC1.53□□□□□ -2.16
UBE3BQ7Z3V4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.53□□□□□ -2.16
UBE3BQ7Z3V4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.53□□□□□ -2.16
UBE3BQ7Z3V4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.16
UBE3BQ7Z3V4 RNA5SP264-201ENST00000363115 107 ntBASIC1.52□□□□□ -2.17
UBE3BQ7Z3V4 SNORA25.3-201ENST00000363205 127 ntBASIC1.52□□□□□ -2.17
UBE3BQ7Z3V4 RNU6-880P-201ENST00000384526 107 ntBASIC1.52□□□□□ -2.17
UBE3BQ7Z3V4 MIR548A1-201ENST00000385041 97 ntBASIC1.52□□□□□ -2.17
UBE3BQ7Z3V4 RPS29P23-201ENST00000458635 123 ntBASIC1.52□□□□□ -2.17
UBE3BQ7Z3V4 RNU6-919P-201ENST00000516731 104 ntBASIC1.52□□□□□ -2.17
UBE3BQ7Z3V4 AC007012.1-201ENST00000567192 175 ntBASIC1.52□□□□□ -2.17
UBE3BQ7Z3V4 Y_RNA.35-201ENST00000362601 101 ntBASIC1.51□□□□□ -2.17
UBE3BQ7Z3V4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.51□□□□□ -2.17
UBE3BQ7Z3V4 RNU6-396P-201ENST00000365369 105 ntBASIC1.51□□□□□ -2.17
UBE3BQ7Z3V4 MT-TN-201ENST00000387400 73 ntBASIC1.51□□□□□ -2.17
UBE3BQ7Z3V4 MIR1276-201ENST00000408707 83 ntBASIC1.51□□□□□ -2.17
UBE3BQ7Z3V4 RNU4-69P-201ENST00000410677 143 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms