Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 RNU11-3P-201ENST00000391111 133 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 RNA5SP465-201ENST00000391195 109 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.55□□□□□ -2.16
USP43Q70EL4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.55□□□□□ -2.16
USP43Q70EL4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.55□□□□□ -2.16
USP43Q70EL4 RNU6-998P-201ENST00000515894 101 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 SNORA25.15-201ENST00000516487 89 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 SNORA18.7-201ENST00000516910 131 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 RNU6-1116P-201ENST00000517269 99 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 MIR4255-201ENST00000579351 72 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 AC069114.2-201ENST00000604699 304 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 AC021613.1-201ENST00000623880 111 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 AC006160.2-201ENST00000637708 154 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 Y_RNA.155-201ENST00000363632 101 ntBASIC1.54□□□□□ -2.16
USP43Q70EL4 Y_RNA.437-201ENST00000384113 113 ntBASIC1.54□□□□□ -2.16
USP43Q70EL4 Y_RNA.470-201ENST00000384307 117 ntBASIC1.54□□□□□ -2.16
USP43Q70EL4 SNORD116-22-201ENST00000384430 92 ntBASIC1.54□□□□□ -2.16
USP43Q70EL4 MIR1287-201ENST00000408492 90 ntBASIC1.54□□□□□ -2.16
USP43Q70EL4 RNU7-45P-201ENST00000459460 63 ntBASIC1.54□□□□□ -2.16
USP43Q70EL4 RNU7-70P-201ENST00000516941 66 ntBASIC1.54□□□□□ -2.16
USP43Q70EL4 MIR6841-201ENST00000637129 72 ntBASIC1.54□□□□□ -2.16
USP43Q70EL4 RNU6-1084P-201ENST00000362498 107 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 Y_RNA.94-201ENST00000363068 106 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 Y_RNA.247-201ENST00000364500 92 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 RNA5SP190-201ENST00000365222 118 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 SNORD58A-201ENST00000383875 65 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 SNORA27-201ENST00000384323 126 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 RNU6-616P-201ENST00000384353 107 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
USP43Q70EL4 SNORA26.6-201ENST00000391256 115 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 SNORA7.5-201ENST00000410672 110 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 RNU4-69P-201ENST00000410677 143 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 MRPL35P3-201ENST00000421557 364 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 HSPE1P9-201ENST00000440046 311 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 STAG3L5P-204ENST00000443759 179 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 AC114811.1-201ENST00000507207 168 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 UBL5P1-201ENST00000507979 193 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 RNU6-1018P-201ENST00000516577 106 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 RNU6-1006P-201ENST00000516998 103 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 MIR4668-201ENST00000582284 70 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 MIR4713-201ENST00000582691 75 ntBASIC1.53□□□□□ -2.16
USP43Q70EL4 SNORD38C-201ENST00000384381 69 ntBASIC1.52□□□□□ -2.17
USP43Q70EL4 MIR802-201ENST00000390235 94 ntBASIC1.52□□□□□ -2.17
USP43Q70EL4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
USP43Q70EL4 RNU6-887P-201ENST00000410660 100 ntBASIC1.52□□□□□ -2.17
USP43Q70EL4 RNA5SP501-201ENST00000410990 112 ntBASIC1.52□□□□□ -2.17
USP43Q70EL4 RNVU1-2-201ENST00000516326 135 ntBASIC1.52□□□□□ -2.17
USP43Q70EL4 AC019288.1-201ENST00000557918 224 ntBASIC1.52□□□□□ -2.17
USP43Q70EL4 SUB1P4-201ENST00000566062 339 ntBASIC1.52□□□□□ -2.17
USP43Q70EL4 MIR4778-201ENST00000577635 80 ntBASIC1.52□□□□□ -2.17
USP43Q70EL4 MIR5094-201ENST00000578766 85 ntBASIC1.52□□□□□ -2.17
USP43Q70EL4 MIR4285-201ENST00000581001 85 ntBASIC1.52□□□□□ -2.17
USP43Q70EL4 SNORA28-201ENST00000606769 126 ntBASIC1.52□□□□□ -2.17
USP43Q70EL4 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.52□□□□□ -2.17
USP43Q70EL4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.52□□□□□ -2.17
USP43Q70EL4 U1.36-201ENST00000620684 176 ntBASIC1.52□□□□□ -2.17
USP43Q70EL4 AC027279.3-201ENST00000625055 122 ntBASIC1.52□□□□□ -2.17
USP43Q70EL4 MIR342-201ENST00000362212 99 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-34-201ENST00000362441 82 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-12-201ENST00000362583 82 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 RNU6-1313P-201ENST00000362622 102 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-29-201ENST00000362834 82 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-9-201ENST00000362912 82 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-21-201ENST00000362963 81 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-14-201ENST00000363090 81 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-41-201ENST00000363608 82 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-11-201ENST00000363616 82 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-5-201ENST00000363633 82 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-39-201ENST00000363694 82 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-4-201ENST00000363810 82 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-6-201ENST00000363942 82 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-42-201ENST00000364273 82 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 RNU6-776P-201ENST00000364403 104 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD45B-201ENST00000364617 72 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-15-201ENST00000364809 81 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 RNU6-1022P-201ENST00000365049 104 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-26-201ENST00000365067 82 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-10-201ENST00000365073 81 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-43-201ENST00000365503 82 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORD115-36-201ENST00000365629 82 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORA18-201ENST00000384416 132 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 RNU6-1319P-201ENST00000390855 104 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORA48.1-201ENST00000390879 135 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 RNU6-747P-201ENST00000390928 104 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 RNU6-1307P-201ENST00000391012 103 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 RNU6-241P-201ENST00000391148 104 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 RNU6-177P-201ENST00000411257 104 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 AL022718.1-201ENST00000412004 84 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNX2P2-201ENST00000424553 323 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.51□□□□□ -2.17
USP43Q70EL4 HSPE1P24-201ENST00000450782 238 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 RNU7-96P-201ENST00000459535 64 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 Y_RNA.705-201ENST00000516862 110 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 SNORA44.1-201ENST00000517031 108 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 MIR3198-2-201ENST00000577868 80 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 MIR548AE2-201ENST00000583456 67 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 MIR548BB-201ENST00000626714 66 ntBASIC1.51□□□□□ -2.17
USP43Q70EL4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 226.7 ms