Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 SNORA26.6-201ENST00000391256 115 ntBASIC0.35□□□□□ -2.35
RPUSD3Q6P087 RNU4-43P-201ENST00000410628 137 ntBASIC0.35□□□□□ -2.35
RPUSD3Q6P087 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
RPUSD3Q6P087 AL365205.2-201ENST00000594586 68 ntBASIC0.35□□□□□ -2.35
RPUSD3Q6P087 AL596211.1-201ENST00000569873 2277 ntBASIC0.34□□□□□ -2.35
RPUSD3Q6P087 MIR518A1-201ENST00000385068 85 ntBASIC0.34□□□□□ -2.36
RPUSD3Q6P087 RNA5SP127-201ENST00000411051 133 ntBASIC0.34□□□□□ -2.36
RPUSD3Q6P087 RNU6-863P-201ENST00000515989 104 ntBASIC0.34□□□□□ -2.36
RPUSD3Q6P087 SNORD116-25-201ENST00000516517 92 ntBASIC0.34□□□□□ -2.36
RPUSD3Q6P087 Y_RNA.720-201ENST00000517166 92 ntBASIC0.34□□□□□ -2.36
RPUSD3Q6P087 AP003327.1-201ENST00000529684 127 ntBASIC0.34□□□□□ -2.36
RPUSD3Q6P087 AC008608.1-201ENST00000603910 127 ntBASIC0.34□□□□□ -2.36
RPUSD3Q6P087 AL662814.1-201ENST00000617364 121 ntBASIC0.34□□□□□ -2.36
RPUSD3Q6P087 AC091932.4-201ENST00000623386 200 ntBASIC0.34□□□□□ -2.36
RPUSD3Q6P087 RNU6-238P-201ENST00000363313 106 ntBASIC0.33□□□□□ -2.36
RPUSD3Q6P087 RNU4-83P-201ENST00000410863 133 ntBASIC0.33□□□□□ -2.36
RPUSD3Q6P087 RNA5SP94-201ENST00000516917 108 ntBASIC0.33□□□□□ -2.36
RPUSD3Q6P087 AL442663.2-201ENST00000554385 511 ntBASIC0.33□□□□□ -2.36
RPUSD3Q6P087 AC022523.2-201ENST00000561045 150 ntBASIC0.33□□□□□ -2.36
RPUSD3Q6P087 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.33□□□□□ -2.36
RPUSD3Q6P087 Y_RNA.374-201ENST00000365606 101 ntBASIC0.32□□□□□ -2.36
RPUSD3Q6P087 Y_RNA.416-201ENST00000384014 113 ntBASIC0.32□□□□□ -2.36
RPUSD3Q6P087 MIR1197-201ENST00000408818 88 ntBASIC0.32□□□□□ -2.36
RPUSD3Q6P087 SNORA62.5-201ENST00000516634 120 ntBASIC0.32□□□□□ -2.36
RPUSD3Q6P087 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.32□□□□□ -2.36
RPUSD3Q6P087 RNU6-651P-201ENST00000411040 105 ntBASIC0.31□□□□□ -2.36
RPUSD3Q6P087 AL121914.1-201ENST00000450188 156 ntBASIC0.31□□□□□ -2.36
RPUSD3Q6P087 RNU6-135P-201ENST00000516769 101 ntBASIC0.31□□□□□ -2.36
RPUSD3Q6P087 MIR3678-201ENST00000578455 94 ntBASIC0.31□□□□□ -2.36
RPUSD3Q6P087 MIR4744-201ENST00000581563 82 ntBASIC0.31□□□□□ -2.36
RPUSD3Q6P087 AC023932.2-201ENST00000603176 175 ntBASIC0.31□□□□□ -2.36
RPUSD3Q6P087 AL442067.1-201ENST00000613261 223 ntBASIC0.31□□□□□ -2.36
RPUSD3Q6P087 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
RPUSD3Q6P087 RNA5SP517-201ENST00000364724 117 ntBASIC0.3□□□□□ -2.36
RPUSD3Q6P087 RNU6-716P-201ENST00000365621 103 ntBASIC0.3□□□□□ -2.36
RPUSD3Q6P087 Y_RNA.518-201ENST00000384552 113 ntBASIC0.3□□□□□ -2.36
RPUSD3Q6P087 Y_RNA.574-201ENST00000384766 95 ntBASIC0.3□□□□□ -2.36
RPUSD3Q6P087 Y_RNA.174-201ENST00000363781 105 ntBASIC0.29□□□□□ -2.36
RPUSD3Q6P087 MIR548H3-201ENST00000408771 118 ntBASIC0.29□□□□□ -2.36
RPUSD3Q6P087 SEPT7P4-201ENST00000437076 306 ntBASIC0.29□□□□□ -2.36
RPUSD3Q6P087 RNU7-45P-201ENST00000459460 63 ntBASIC0.29□□□□□ -2.36
RPUSD3Q6P087 MIR378D2-201ENST00000580636 98 ntBASIC0.29□□□□□ -2.36
RPUSD3Q6P087 Y_RNA.30-201ENST00000362572 97 ntBASIC0.28□□□□□ -2.36
RPUSD3Q6P087 Y_RNA.483-201ENST00000384380 101 ntBASIC0.28□□□□□ -2.36
RPUSD3Q6P087 RNU6-1160P-201ENST00000384546 104 ntBASIC0.28□□□□□ -2.36
RPUSD3Q6P087 Y_RNA.567-201ENST00000384736 106 ntBASIC0.28□□□□□ -2.36
RPUSD3Q6P087 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.28□□□□□ -2.36
RPUSD3Q6P087 SNORA22.1-201ENST00000362701 134 ntBASIC0.27□□□□□ -2.37
RPUSD3Q6P087 Y_RNA.54-201ENST00000362766 105 ntBASIC0.27□□□□□ -2.37
RPUSD3Q6P087 RNA5SP257-201ENST00000363023 116 ntBASIC0.27□□□□□ -2.37
RPUSD3Q6P087 SNORA63-201ENST00000363450 132 ntBASIC0.27□□□□□ -2.37
RPUSD3Q6P087 Y_RNA.251-201ENST00000364551 99 ntBASIC0.27□□□□□ -2.37
RPUSD3Q6P087 Y_RNA.512-201ENST00000384518 102 ntBASIC0.27□□□□□ -2.37
RPUSD3Q6P087 RNU5E-9P-201ENST00000411164 104 ntBASIC0.27□□□□□ -2.37
RPUSD3Q6P087 RNU6-765P-201ENST00000516916 99 ntBASIC0.27□□□□□ -2.37
RPUSD3Q6P087 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.27□□□□□ -2.37
RPUSD3Q6P087 AC021613.1-201ENST00000623880 111 ntBASIC0.27□□□□□ -2.37
RPUSD3Q6P087 Y_RNA.42-201ENST00000362660 108 ntBASIC0.26□□□□□ -2.37
RPUSD3Q6P087 RNU6-403P-201ENST00000363163 104 ntBASIC0.26□□□□□ -2.37
RPUSD3Q6P087 SNORD44.1-201ENST00000363202 61 ntBASIC0.26□□□□□ -2.37
RPUSD3Q6P087 SNORD118-201ENST00000363593 134 ntBASIC0.26□□□□□ -2.37
RPUSD3Q6P087 Y_RNA.292-201ENST00000364904 97 ntBASIC0.26□□□□□ -2.37
RPUSD3Q6P087 SNORA8.2-201ENST00000384372 139 ntBASIC0.26□□□□□ -2.37
RPUSD3Q6P087 MT-TW-201ENST00000387382 68 ntBASIC0.26□□□□□ -2.37
RPUSD3Q6P087 RNA5SP63-201ENST00000391225 112 ntBASIC0.26□□□□□ -2.37
RPUSD3Q6P087 AL512326.2-201ENST00000426359 151 ntBASIC0.26□□□□□ -2.37
RPUSD3Q6P087 MTATP8P1-201ENST00000467115 207 ntBASIC0.26□□□□□ -2.37
RPUSD3Q6P087 Y_RNA.681-201ENST00000516445 113 ntBASIC0.26□□□□□ -2.37
RPUSD3Q6P087 AP003072.1-201ENST00000531740 145 ntBASIC0.26□□□□□ -2.37
RPUSD3Q6P087 MIR4514-201ENST00000581410 57 ntBASIC0.26□□□□□ -2.37
RPUSD3Q6P087 MIR376A2-201ENST00000636782 80 ntBASIC0.26□□□□□ -2.37
RPUSD3Q6P087 SNRPGP12-201ENST00000449481 213 ntBASIC0.25□□□□□ -2.37
RPUSD3Q6P087 RNU6-561P-201ENST00000516222 102 ntBASIC0.25□□□□□ -2.37
RPUSD3Q6P087 AC141846.1-201ENST00000568348 142 ntBASIC0.25□□□□□ -2.37
RPUSD3Q6P087 MIR6082-201ENST00000613604 109 ntBASIC0.25□□□□□ -2.37
RPUSD3Q6P087 RNU6-349P-201ENST00000362402 107 ntBASIC0.24□□□□□ -2.37
RPUSD3Q6P087 Y_RNA.121-201ENST00000363309 113 ntBASIC0.24□□□□□ -2.37
RPUSD3Q6P087 Y_RNA.145-201ENST00000363527 102 ntBASIC0.24□□□□□ -2.37
RPUSD3Q6P087 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
RPUSD3Q6P087 Y_RNA.797-201ENST00000515977 94 ntBASIC0.24□□□□□ -2.37
RPUSD3Q6P087 RNU6-1153P-201ENST00000516760 105 ntBASIC0.24□□□□□ -2.37
RPUSD3Q6P087 AC133485.4-201ENST00000561835 220 ntBASIC0.24□□□□□ -2.37
RPUSD3Q6P087 MIR8066-201ENST00000617280 78 ntBASIC0.24□□□□□ -2.37
RPUSD3Q6P087 MIR6841-201ENST00000637129 72 ntBASIC0.24□□□□□ -2.37
RPUSD3Q6P087 RNA5SP62-201ENST00000363457 110 ntBASIC0.23□□□□□ -2.37
RPUSD3Q6P087 Y_RNA.149-201ENST00000363558 117 ntBASIC0.23□□□□□ -2.37
RPUSD3Q6P087 Y_RNA.288-201ENST00000364854 92 ntBASIC0.23□□□□□ -2.37
RPUSD3Q6P087 RNU6-949P-201ENST00000384040 107 ntBASIC0.23□□□□□ -2.37
RPUSD3Q6P087 RNU4-70P-201ENST00000384579 139 ntBASIC0.23□□□□□ -2.37
RPUSD3Q6P087 MIR624-201ENST00000385217 97 ntBASIC0.23□□□□□ -2.37
RPUSD3Q6P087 RNU6-578P-201ENST00000390980 103 ntBASIC0.23□□□□□ -2.37
RPUSD3Q6P087 MTND1P19-201ENST00000511780 315 ntBASIC0.23□□□□□ -2.37
RPUSD3Q6P087 SNORA25.18-201ENST00000607153 114 ntBASIC0.23□□□□□ -2.37
RPUSD3Q6P087 MIR2909-201ENST00000617113 69 ntBASIC0.23□□□□□ -2.37
RPUSD3Q6P087 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.23□□□□□ -2.37
RPUSD3Q6P087 Y_RNA.13-201ENST00000362403 112 ntBASIC0.22□□□□□ -2.37
RPUSD3Q6P087 RNU6-1229P-201ENST00000364295 107 ntBASIC0.22□□□□□ -2.37
RPUSD3Q6P087 SNORA25.7-201ENST00000364375 127 ntBASIC0.22□□□□□ -2.37
RPUSD3Q6P087 RNU4-67P-201ENST00000364569 141 ntBASIC0.22□□□□□ -2.37
RPUSD3Q6P087 Y_RNA.277-201ENST00000364754 102 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 258.4 ms