Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RNU1-40P-201ENST00000516816 164 ntBASIC1.93□□□□□ -2.1
HLA-DQA1Q5Y7H0 RNU1-97P-201ENST00000516872 164 ntBASIC1.93□□□□□ -2.1
HLA-DQA1Q5Y7H0 AC242498.1-201ENST00000604134 111 ntBASIC1.93□□□□□ -2.1
HLA-DQA1Q5Y7H0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
HLA-DQA1Q5Y7H0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DQA1Q5Y7H0 SNORA25.3-201ENST00000363205 127 ntBASIC1.92□□□□□ -2.1
HLA-DQA1Q5Y7H0 SNORD45B-201ENST00000364617 72 ntBASIC1.92□□□□□ -2.1
HLA-DQA1Q5Y7H0 RNU6-60P-201ENST00000364792 103 ntBASIC1.92□□□□□ -2.1
HLA-DQA1Q5Y7H0 Y_RNA.467-201ENST00000384297 102 ntBASIC1.92□□□□□ -2.1
HLA-DQA1Q5Y7H0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.92□□□□□ -2.1
HLA-DQA1Q5Y7H0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DQA1Q5Y7H0 MIR5694-201ENST00000581190 76 ntBASIC1.92□□□□□ -2.1
HLA-DQA1Q5Y7H0 AP000942.3-201ENST00000603702 160 ntBASIC1.92□□□□□ -2.1
HLA-DQA1Q5Y7H0 GHRLOS.1-201ENST00000610995 70 ntBASIC1.92□□□□□ -2.1
HLA-DQA1Q5Y7H0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.92□□□□□ -2.1
HLA-DQA1Q5Y7H0 U7.3-201ENST00000616123 62 ntBASIC1.92□□□□□ -2.1
HLA-DQA1Q5Y7H0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
HLA-DQA1Q5Y7H0 Y_RNA.95-201ENST00000363079 95 ntBASIC1.91□□□□□ -2.1
HLA-DQA1Q5Y7H0 Y_RNA.388-201ENST00000383919 113 ntBASIC1.91□□□□□ -2.1
HLA-DQA1Q5Y7H0 Y_RNA.448-201ENST00000384185 108 ntBASIC1.91□□□□□ -2.1
HLA-DQA1Q5Y7H0 SNORA67.3-201ENST00000384366 140 ntBASIC1.91□□□□□ -2.1
HLA-DQA1Q5Y7H0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.91□□□□□ -2.1
HLA-DQA1Q5Y7H0 MIR1302-7-201ENST00000408841 72 ntBASIC1.91□□□□□ -2.1
HLA-DQA1Q5Y7H0 RNY4P29-201ENST00000410801 97 ntBASIC1.91□□□□□ -2.1
HLA-DQA1Q5Y7H0 AC096949.1-201ENST00000412047 152 ntBASIC1.91□□□□□ -2.1
HLA-DQA1Q5Y7H0 snoU13.25-201ENST00000458945 104 ntBASIC1.91□□□□□ -2.1
HLA-DQA1Q5Y7H0 RNU7-137P-201ENST00000516788 62 ntBASIC1.91□□□□□ -2.1
HLA-DQA1Q5Y7H0 MIR376B-201ENST00000614515 100 ntBASIC1.91□□□□□ -2.1
HLA-DQA1Q5Y7H0 MIR8063-201ENST00000621930 81 ntBASIC1.91□□□□□ -2.1
HLA-DQA1Q5Y7H0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DQA1Q5Y7H0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DQA1Q5Y7H0 RNA5SP48-201ENST00000363969 126 ntBASIC1.9□□□□□ -2.11
HLA-DQA1Q5Y7H0 RNY1P13-201ENST00000365030 105 ntBASIC1.9□□□□□ -2.11
HLA-DQA1Q5Y7H0 RNA5SP37-201ENST00000365420 130 ntBASIC1.9□□□□□ -2.11
HLA-DQA1Q5Y7H0 MIR34C-201ENST00000384831 77 ntBASIC1.9□□□□□ -2.11
HLA-DQA1Q5Y7H0 RNU6-1321P-201ENST00000390905 107 ntBASIC1.9□□□□□ -2.11
HLA-DQA1Q5Y7H0 SNORA26.2-201ENST00000390922 122 ntBASIC1.9□□□□□ -2.11
HLA-DQA1Q5Y7H0 MRPL35P3-201ENST00000421557 364 ntBASIC1.9□□□□□ -2.11
HLA-DQA1Q5Y7H0 AC025033.1-201ENST00000463883 194 ntBASIC1.9□□□□□ -2.11
HLA-DQA1Q5Y7H0 AC005908.1-201ENST00000468701 347 ntBASIC1.9□□□□□ -2.11
HLA-DQA1Q5Y7H0 AC026421.1-201ENST00000519101 163 ntBASIC1.9□□□□□ -2.11
HLA-DQA1Q5Y7H0 AL357312.1-201ENST00000603879 298 ntBASIC1.9□□□□□ -2.11
HLA-DQA1Q5Y7H0 AC096720.1-201ENST00000604441 183 ntBASIC1.9□□□□□ -2.11
HLA-DQA1Q5Y7H0 AC103810.8-201ENST00000607347 118 ntBASIC1.9□□□□□ -2.11
HLA-DQA1Q5Y7H0 Y_RNA.783-201ENST00000613546 102 ntBASIC1.9□□□□□ -2.11
HLA-DQA1Q5Y7H0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HLA-DQA1Q5Y7H0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DQA1Q5Y7H0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DQA1Q5Y7H0 AC109327.2-201ENST00000448339 378 ntBASIC1.89□□□□□ -2.11
HLA-DQA1Q5Y7H0 HSPE1P24-201ENST00000450782 238 ntBASIC1.89□□□□□ -2.11
HLA-DQA1Q5Y7H0 RNU6-250P-201ENST00000516958 103 ntBASIC1.89□□□□□ -2.11
HLA-DQA1Q5Y7H0 RNU6-1006P-201ENST00000516998 103 ntBASIC1.89□□□□□ -2.11
HLA-DQA1Q5Y7H0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DQA1Q5Y7H0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DQA1Q5Y7H0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DQA1Q5Y7H0 SNORD114-10-201ENST00000363409 72 ntBASIC1.88□□□□□ -2.11
HLA-DQA1Q5Y7H0 RNU6-1134P-201ENST00000365156 101 ntBASIC1.88□□□□□ -2.11
HLA-DQA1Q5Y7H0 MIR17-201ENST00000385012 84 ntBASIC1.88□□□□□ -2.11
HLA-DQA1Q5Y7H0 RNA5SP237-201ENST00000410414 113 ntBASIC1.88□□□□□ -2.11
HLA-DQA1Q5Y7H0 BTF3P4-201ENST00000418852 495 ntBASIC1.88□□□□□ -2.11
HLA-DQA1Q5Y7H0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DQA1Q5Y7H0 AC027119.1-201ENST00000440877 241 ntBASIC1.88□□□□□ -2.11
HLA-DQA1Q5Y7H0 AC141846.1-201ENST00000568348 142 ntBASIC1.88□□□□□ -2.11
HLA-DQA1Q5Y7H0 AC062037.1-201ENST00000605302 128 ntBASIC1.88□□□□□ -2.11
HLA-DQA1Q5Y7H0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
HLA-DQA1Q5Y7H0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DQA1Q5Y7H0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DQA1Q5Y7H0 Y_RNA.190-201ENST00000363964 101 ntBASIC1.87□□□□□ -2.11
HLA-DQA1Q5Y7H0 RNU6-865P-201ENST00000364772 107 ntBASIC1.87□□□□□ -2.11
HLA-DQA1Q5Y7H0 SNORA11.2-201ENST00000408318 127 ntBASIC1.87□□□□□ -2.11
HLA-DQA1Q5Y7H0 HMGN2P23-201ENST00000456759 269 ntBASIC1.87□□□□□ -2.11
HLA-DQA1Q5Y7H0 AC090255.1-201ENST00000495779 349 ntBASIC1.87□□□□□ -2.11
HLA-DQA1Q5Y7H0 AC121758.2-201ENST00000553271 193 ntBASIC1.87□□□□□ -2.11
HLA-DQA1Q5Y7H0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DQA1Q5Y7H0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.87□□□□□ -2.11
HLA-DQA1Q5Y7H0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.87□□□□□ -2.11
HLA-DQA1Q5Y7H0 WWP1P1-201ENST00000466609 2769 ntBASIC1.86□□□□□ -2.11
HLA-DQA1Q5Y7H0 SNORD1A-201ENST00000364968 72 ntBASIC1.86□□□□□ -2.11
HLA-DQA1Q5Y7H0 RPS29P28-201ENST00000446439 141 ntBASIC1.86□□□□□ -2.11
HLA-DQA1Q5Y7H0 snoU13.2-201ENST00000459201 104 ntBASIC1.86□□□□□ -2.11
HLA-DQA1Q5Y7H0 RN7SL429P-201ENST00000479090 223 ntBASIC1.86□□□□□ -2.11
HLA-DQA1Q5Y7H0 RN7SL489P-201ENST00000486185 223 ntBASIC1.86□□□□□ -2.11
HLA-DQA1Q5Y7H0 RN7SL327P-201ENST00000488659 223 ntBASIC1.86□□□□□ -2.11
HLA-DQA1Q5Y7H0 AC019176.1-201ENST00000518519 225 ntBASIC1.86□□□□□ -2.11
HLA-DQA1Q5Y7H0 MIR5002-201ENST00000584713 97 ntBASIC1.86□□□□□ -2.11
HLA-DQA1Q5Y7H0 RNU6-86P-201ENST00000606534 107 ntBASIC1.86□□□□□ -2.11
HLA-DQA1Q5Y7H0 RN7SL853P-201ENST00000617250 223 ntBASIC1.86□□□□□ -2.11
HLA-DQA1Q5Y7H0 AL662814.1-201ENST00000617364 121 ntBASIC1.86□□□□□ -2.11
HLA-DQA1Q5Y7H0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DQA1Q5Y7H0 Y_RNA.140-201ENST00000363474 103 ntBASIC1.85□□□□□ -2.11
HLA-DQA1Q5Y7H0 SNORD38.1-201ENST00000363863 68 ntBASIC1.85□□□□□ -2.11
HLA-DQA1Q5Y7H0 MIR588-201ENST00000384900 83 ntBASIC1.85□□□□□ -2.11
HLA-DQA1Q5Y7H0 snoU13.9-201ENST00000458927 103 ntBASIC1.85□□□□□ -2.11
HLA-DQA1Q5Y7H0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DQA1Q5Y7H0 MIR302D-201ENST00000362275 68 ntBASIC1.84□□□□□ -2.11
HLA-DQA1Q5Y7H0 RNU6-1163P-201ENST00000364516 107 ntBASIC1.84□□□□□ -2.11
HLA-DQA1Q5Y7H0 RNA5SP160-201ENST00000364866 120 ntBASIC1.84□□□□□ -2.11
HLA-DQA1Q5Y7H0 RNU6-396P-201ENST00000365369 105 ntBASIC1.84□□□□□ -2.11
HLA-DQA1Q5Y7H0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.84□□□□□ -2.11
HLA-DQA1Q5Y7H0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 388.4 ms