Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RNU6-1018P-201ENST00000516577 106 ntBASIC2.35□□□□□ -2.03
USPL1Q5W0Q7 RNU6-250P-201ENST00000516958 103 ntBASIC2.35□□□□□ -2.03
USPL1Q5W0Q7 MIR5694-201ENST00000581190 76 ntBASIC2.35□□□□□ -2.03
USPL1Q5W0Q7 MIR4251-201ENST00000635819 61 ntBASIC2.35□□□□□ -2.03
USPL1Q5W0Q7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
USPL1Q5W0Q7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
USPL1Q5W0Q7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
USPL1Q5W0Q7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
USPL1Q5W0Q7 RNA5SP138-201ENST00000365098 114 ntBASIC2.34□□□□□ -2.03
USPL1Q5W0Q7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
USPL1Q5W0Q7 RNY4P30-201ENST00000410216 95 ntBASIC2.34□□□□□ -2.03
USPL1Q5W0Q7 Y_RNA.601-201ENST00000410500 113 ntBASIC2.34□□□□□ -2.03
USPL1Q5W0Q7 AP1B1P2-201ENST00000416196 106 ntBASIC2.34□□□□□ -2.03
USPL1Q5W0Q7 CYP3A52P-201ENST00000563326 91 ntBASIC2.34□□□□□ -2.03
USPL1Q5W0Q7 MIR3935-201ENST00000583472 104 ntBASIC2.34□□□□□ -2.03
USPL1Q5W0Q7 Y_RNA.773-201ENST00000607168 90 ntBASIC2.34□□□□□ -2.03
USPL1Q5W0Q7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
USPL1Q5W0Q7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.33□□□□□ -2.04
USPL1Q5W0Q7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USPL1Q5W0Q7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USPL1Q5W0Q7 RNU6-1099P-201ENST00000363533 107 ntBASIC2.33□□□□□ -2.04
USPL1Q5W0Q7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
USPL1Q5W0Q7 MIR4303-201ENST00000581299 66 ntBASIC2.33□□□□□ -2.04
USPL1Q5W0Q7 MIR8065-201ENST00000620577 100 ntBASIC2.33□□□□□ -2.04
USPL1Q5W0Q7 MIR1255B1-201ENST00000636325 63 ntBASIC2.33□□□□□ -2.04
USPL1Q5W0Q7 Y_RNA.360-201ENST00000365512 102 ntBASIC2.32□□□□□ -2.04
USPL1Q5W0Q7 HMGN1P33-201ENST00000432945 451 ntBASIC2.32□□□□□ -2.04
USPL1Q5W0Q7 SCARNA23-201ENST00000516060 130 ntBASIC2.32□□□□□ -2.04
USPL1Q5W0Q7 AC015688.6-201ENST00000577737 104 ntBASIC2.32□□□□□ -2.04
USPL1Q5W0Q7 MIR4299-201ENST00000577899 72 ntBASIC2.32□□□□□ -2.04
USPL1Q5W0Q7 MIR8074-201ENST00000615081 81 ntBASIC2.32□□□□□ -2.04
USPL1Q5W0Q7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
USPL1Q5W0Q7 Y_RNA.377-201ENST00000365644 108 ntBASIC2.31□□□□□ -2.04
USPL1Q5W0Q7 RNU6-602P-201ENST00000411155 105 ntBASIC2.31□□□□□ -2.04
USPL1Q5W0Q7 MTATP8P2-201ENST00000435212 202 ntBASIC2.31□□□□□ -2.04
USPL1Q5W0Q7 AC079804.2-201ENST00000490376 200 ntBASIC2.31□□□□□ -2.04
USPL1Q5W0Q7 SNORD111.1-201ENST00000516421 86 ntBASIC2.31□□□□□ -2.04
USPL1Q5W0Q7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
USPL1Q5W0Q7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
USPL1Q5W0Q7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
USPL1Q5W0Q7 Y_RNA.107-201ENST00000363190 121 ntBASIC2.3□□□□□ -2.04
USPL1Q5W0Q7 RNU6-616P-201ENST00000384353 107 ntBASIC2.3□□□□□ -2.04
USPL1Q5W0Q7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
USPL1Q5W0Q7 SNORA19.1-201ENST00000410656 129 ntBASIC2.3□□□□□ -2.04
USPL1Q5W0Q7 RNA5SP233-201ENST00000459153 113 ntBASIC2.3□□□□□ -2.04
USPL1Q5W0Q7 RNU7-35P-201ENST00000517174 62 ntBASIC2.3□□□□□ -2.04
USPL1Q5W0Q7 SNORA77B-201ENST00000578179 125 ntBASIC2.3□□□□□ -2.04
USPL1Q5W0Q7 AL359821.1-201ENST00000605519 182 ntBASIC2.3□□□□□ -2.04
USPL1Q5W0Q7 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.3□□□□□ -2.04
USPL1Q5W0Q7 RNU6-832P-201ENST00000363319 107 ntBASIC2.29□□□□□ -2.04
USPL1Q5W0Q7 SNORD38B-201ENST00000384690 67 ntBASIC2.29□□□□□ -2.04
USPL1Q5W0Q7 AC245047.7-201ENST00000440265 293 ntBASIC2.29□□□□□ -2.04
USPL1Q5W0Q7 SNORA72.7-201ENST00000516349 94 ntBASIC2.29□□□□□ -2.04
USPL1Q5W0Q7 MIR6840-201ENST00000611937 71 ntBASIC2.29□□□□□ -2.04
USPL1Q5W0Q7 MIR8070-201ENST00000616510 88 ntBASIC2.29□□□□□ -2.04
USPL1Q5W0Q7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.29□□□□□ -2.04
USPL1Q5W0Q7 SNORD38B-202ENST00000625943 69 ntBASIC2.29□□□□□ -2.04
USPL1Q5W0Q7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
USPL1Q5W0Q7 Y_RNA.96-201ENST00000363092 109 ntBASIC2.28□□□□□ -2.04
USPL1Q5W0Q7 Y_RNA.466-201ENST00000384294 113 ntBASIC2.28□□□□□ -2.04
USPL1Q5W0Q7 MIR577-201ENST00000385196 96 ntBASIC2.28□□□□□ -2.04
USPL1Q5W0Q7 SNORD41-201ENST00000386967 70 ntBASIC2.28□□□□□ -2.04
USPL1Q5W0Q7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.28□□□□□ -2.04
USPL1Q5W0Q7 RNU6-1086P-201ENST00000410930 100 ntBASIC2.28□□□□□ -2.04
USPL1Q5W0Q7 AC096949.1-201ENST00000412047 152 ntBASIC2.28□□□□□ -2.04
USPL1Q5W0Q7 MIR1270-201ENST00000459320 83 ntBASIC2.28□□□□□ -2.04
USPL1Q5W0Q7 RNU7-41P-201ENST00000515917 61 ntBASIC2.28□□□□□ -2.04
USPL1Q5W0Q7 RNU6-109P-201ENST00000516364 107 ntBASIC2.28□□□□□ -2.04
USPL1Q5W0Q7 RNU6-184P-201ENST00000516514 107 ntBASIC2.28□□□□□ -2.04
USPL1Q5W0Q7 MIR548AO-201ENST00000579992 96 ntBASIC2.28□□□□□ -2.04
USPL1Q5W0Q7 GHRLOS.1-201ENST00000610995 70 ntBASIC2.28□□□□□ -2.04
USPL1Q5W0Q7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
USPL1Q5W0Q7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
USPL1Q5W0Q7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.27□□□□□ -2.05
USPL1Q5W0Q7 SNORA32-201ENST00000384072 121 ntBASIC2.27□□□□□ -2.05
USPL1Q5W0Q7 RNU6-439P-201ENST00000384188 106 ntBASIC2.27□□□□□ -2.05
USPL1Q5W0Q7 SUMO2P12-201ENST00000405924 140 ntBASIC2.27□□□□□ -2.05
USPL1Q5W0Q7 TRMT112P2-201ENST00000512910 132 ntBASIC2.27□□□□□ -2.05
USPL1Q5W0Q7 SNORA44.1-201ENST00000517031 108 ntBASIC2.27□□□□□ -2.05
USPL1Q5W0Q7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.27□□□□□ -2.05
USPL1Q5W0Q7 AL627230.6-201ENST00000611129 280 ntBASIC2.27□□□□□ -2.05
USPL1Q5W0Q7 MIR4679-1-201ENST00000637619 75 ntBASIC2.27□□□□□ -2.05
USPL1Q5W0Q7 WWP1P1-201ENST00000466609 2769 ntBASIC2.27□□□□□ -2.05
USPL1Q5W0Q7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USPL1Q5W0Q7 AL596028.1-201ENST00000326971 197 ntBASIC2.26□□□□□ -2.05
USPL1Q5W0Q7 RNU6-1313P-201ENST00000362622 102 ntBASIC2.26□□□□□ -2.05
USPL1Q5W0Q7 SNORD115-35-201ENST00000365122 82 ntBASIC2.26□□□□□ -2.05
USPL1Q5W0Q7 SNORA18-201ENST00000384416 132 ntBASIC2.26□□□□□ -2.05
USPL1Q5W0Q7 RNU6-679P-201ENST00000391003 106 ntBASIC2.26□□□□□ -2.05
USPL1Q5W0Q7 AL356379.1-201ENST00000414105 126 ntBASIC2.26□□□□□ -2.05
USPL1Q5W0Q7 HSPE1P24-201ENST00000450782 238 ntBASIC2.26□□□□□ -2.05
USPL1Q5W0Q7 RNU6-521P-201ENST00000516663 105 ntBASIC2.26□□□□□ -2.05
USPL1Q5W0Q7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USPL1Q5W0Q7 MIR337-201ENST00000362281 93 ntBASIC2.25□□□□□ -2.05
USPL1Q5W0Q7 Y_RNA.220-201ENST00000364244 109 ntBASIC2.25□□□□□ -2.05
USPL1Q5W0Q7 MIR605-201ENST00000385078 83 ntBASIC2.25□□□□□ -2.05
USPL1Q5W0Q7 SNORA7.5-201ENST00000410672 110 ntBASIC2.25□□□□□ -2.05
USPL1Q5W0Q7 AC096720.1-201ENST00000604441 183 ntBASIC2.25□□□□□ -2.05
USPL1Q5W0Q7 SNORD33-201ENST00000362761 85 ntBASIC2.24□□□□□ -2.05
USPL1Q5W0Q7 SNORD45B-201ENST00000364617 72 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms