Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.47□□□□□ -2.64
VPS13DQ5THJ4 RNU6-80P-201ENST00000384195 107 ntBASIC-1.47□□□□□ -2.64
VPS13DQ5THJ4 RNU6-21P-201ENST00000384710 107 ntBASIC-1.47□□□□□ -2.64
VPS13DQ5THJ4 GPR143P-201ENST00000434155 205 ntBASIC-1.47□□□□□ -2.64
VPS13DQ5THJ4 SNORD36C-201ENST00000516733 66 ntBASIC-1.47□□□□□ -2.64
VPS13DQ5THJ4 RNU6-88P-201ENST00000606801 100 ntBASIC-1.47□□□□□ -2.64
VPS13DQ5THJ4 AL161932.1-201ENST00000437408 146 ntBASIC-1.47□□□□□ -2.64
VPS13DQ5THJ4 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.47□□□□□ -2.65
VPS13DQ5THJ4 RNU6-246P-201ENST00000384702 107 ntBASIC-1.47□□□□□ -2.65
VPS13DQ5THJ4 MIR450B-201ENST00000401182 78 ntBASIC-1.47□□□□□ -2.65
VPS13DQ5THJ4 RBMX2P4-201ENST00000441256 376 ntBASIC-1.47□□□□□ -2.65
VPS13DQ5THJ4 AL158209.2-201ENST00000619266 216 ntBASIC-1.47□□□□□ -2.65
VPS13DQ5THJ4 AL445984.1-201ENST00000637834 659 ntBASIC-1.47□□□□□ -2.65
VPS13DQ5THJ4 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.47□□□□□ -2.65
VPS13DQ5THJ4 MTND3P23-201ENST00000431980 347 ntBASIC-1.47□□□□□ -2.65
VPS13DQ5THJ4 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.47□□□□□ -2.65
VPS13DQ5THJ4 RNU6-559P-201ENST00000516151 98 ntBASIC-1.47□□□□□ -2.65
VPS13DQ5THJ4 AC123904.2-201ENST00000548059 300 ntBASIC-1.47□□□□□ -2.65
VPS13DQ5THJ4 AC104072.1-201ENST00000568817 668 ntBASIC-1.47□□□□□ -2.65
VPS13DQ5THJ4 ZNF92P2-201ENST00000600543 1059 ntBASIC-1.47□□□□□ -2.65
VPS13DQ5THJ4 AC092807.2-201ENST00000609367 243 ntBASIC-1.47□□□□□ -2.65
VPS13DQ5THJ4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.47□□□□□ -2.65
VPS13DQ5THJ4 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.48□□□□□ -2.65
VPS13DQ5THJ4 MIR513C-201ENST00000401352 84 ntBASIC-1.48□□□□□ -2.65
VPS13DQ5THJ4 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.48□□□□□ -2.65
VPS13DQ5THJ4 AC115989.2-201ENST00000578640 563 ntBASIC-1.48□□□□□ -2.65
VPS13DQ5THJ4 U6.112-201ENST00000384129 70 ntBASIC-1.48□□□□□ -2.65
VPS13DQ5THJ4 MIR1255B2-201ENST00000408618 67 ntBASIC-1.48□□□□□ -2.65
VPS13DQ5THJ4 RNU2-61P-201ENST00000411069 191 ntBASIC-1.48□□□□□ -2.65
VPS13DQ5THJ4 CYCSP46-201ENST00000423569 204 ntBASIC-1.48□□□□□ -2.65
VPS13DQ5THJ4 RNU7-113P-201ENST00000459273 62 ntBASIC-1.48□□□□□ -2.65
VPS13DQ5THJ4 AC022616.6-201ENST00000520479 119 ntBASIC-1.48□□□□□ -2.65
VPS13DQ5THJ4 AC122108.2-201ENST00000611946 526 ntBASIC-1.48□□□□□ -2.65
VPS13DQ5THJ4 SNORD19-201ENST00000391191 68 ntBASIC-1.48□□□□□ -2.65
VPS13DQ5THJ4 SNORD42B-201ENST00000458893 67 ntBASIC-1.48□□□□□ -2.65
VPS13DQ5THJ4 AC104010.1-201ENST00000616889 150 ntBASIC-1.48□□□□□ -2.65
VPS13DQ5THJ4 AC009248.2-201ENST00000619826 254 ntBASIC-1.48□□□□□ -2.65
VPS13DQ5THJ4 RNU4-17P-201ENST00000365598 141 ntBASIC-1.49□□□□□ -2.65
VPS13DQ5THJ4 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.49□□□□□ -2.65
VPS13DQ5THJ4 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.49□□□□□ -2.65
VPS13DQ5THJ4 SNORD115-47-201ENST00000391226 86 ntBASIC-1.49□□□□□ -2.65
VPS13DQ5THJ4 MTCO2P21-201ENST00000419780 677 ntBASIC-1.49□□□□□ -2.65
VPS13DQ5THJ4 MTND4LP14-201ENST00000429447 288 ntBASIC-1.49□□□□□ -2.65
VPS13DQ5THJ4 RNU7-24P-201ENST00000458867 62 ntBASIC-1.49□□□□□ -2.65
VPS13DQ5THJ4 RNU6-774P-201ENST00000363238 107 ntBASIC-1.49□□□□□ -2.65
VPS13DQ5THJ4 SNORD73A-201ENST00000386062 65 ntBASIC-1.49□□□□□ -2.65
VPS13DQ5THJ4 RNU6-101P-201ENST00000410323 104 ntBASIC-1.49□□□□□ -2.65
VPS13DQ5THJ4 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.49□□□□□ -2.65
VPS13DQ5THJ4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.49□□□□□ -2.65
VPS13DQ5THJ4 RNU6-719P-201ENST00000516671 104 ntBASIC-1.49□□□□□ -2.65
VPS13DQ5THJ4 AC012531.4-201ENST00000616509 177 ntBASIC-1.49□□□□□ -2.65
VPS13DQ5THJ4 RNU6-728P-201ENST00000365375 104 ntBASIC-1.49□□□□□ -2.65
VPS13DQ5THJ4 MTND4P24-201ENST00000424002 397 ntBASIC-1.49□□□□□ -2.65
VPS13DQ5THJ4 RNU6-522P-201ENST00000364497 107 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 RNU6-1303P-201ENST00000364841 107 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 RNU7-175P-201ENST00000515915 61 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 AP002795.1-201ENST00000534879 84 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 AC090617.8-201ENST00000623339 167 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 RNU6-601P-201ENST00000384540 107 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 MIR509-1-201ENST00000385265 94 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 MIR509-2-201ENST00000390724 91 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 snoU13.10-201ENST00000459301 103 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 MIR3118-1-201ENST00000581787 76 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 AP001542.1-201ENST00000591314 200 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 AC022140.2-201ENST00000623500 188 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 RNU6-978P-201ENST00000364371 103 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 SNORD38.2-201ENST00000384470 69 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 HSPE1P25-201ENST00000455484 251 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 SNORD11-201ENST00000459124 84 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 MIR4662B-201ENST00000579498 81 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 RNY4P10-201ENST00000365571 96 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 SNORD72-201ENST00000390994 80 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 CHEK2P4-201ENST00000450340 246 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 AC073534.2-201ENST00000620377 381 ntBASIC-1.5□□□□□ -2.65
VPS13DQ5THJ4 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.51□□□□□ -2.65
VPS13DQ5THJ4 RNU6-760P-201ENST00000516078 97 ntBASIC-1.51□□□□□ -2.65
VPS13DQ5THJ4 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.51□□□□□ -2.65
VPS13DQ5THJ4 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.51□□□□□ -2.65
VPS13DQ5THJ4 SNORD67.1-201ENST00000516618 108 ntBASIC-1.51□□□□□ -2.65
VPS13DQ5THJ4 MIR4500-201ENST00000579472 76 ntBASIC-1.51□□□□□ -2.65
VPS13DQ5THJ4 MIR5708-201ENST00000579723 85 ntBASIC-1.51□□□□□ -2.65
VPS13DQ5THJ4 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.51□□□□□ -2.65
VPS13DQ5THJ4 SNORD115-22-201ENST00000364456 82 ntBASIC-1.51□□□□□ -2.65
VPS13DQ5THJ4 RNU6-159P-201ENST00000391080 106 ntBASIC-1.51□□□□□ -2.65
VPS13DQ5THJ4 AC104850.1-201ENST00000435940 476 ntBASIC-1.51□□□□□ -2.65
VPS13DQ5THJ4 MTND4LP18-201ENST00000526864 291 ntBASIC-1.51□□□□□ -2.65
VPS13DQ5THJ4 AC084781.2-201ENST00000615568 161 ntBASIC-1.51□□□□□ -2.65
VPS13DQ5THJ4 SNORA32-201ENST00000384072 121 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 RNU6-938P-201ENST00000411285 103 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 MIR3912-201ENST00000577566 105 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 AC004467.1-201ENST00000615678 330 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 RNU6-769P-201ENST00000384407 104 ntBASIC-1.52□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 211.5 ms