Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RNU1-78P-201ENST00000391248 165 ntBASIC1.65□□□□□ -2.15
SLC44A4Q53GD3 RNU6-1190P-201ENST00000410811 104 ntBASIC1.65□□□□□ -2.15
SLC44A4Q53GD3 snoU13.18-201ENST00000459483 104 ntBASIC1.65□□□□□ -2.15
SLC44A4Q53GD3 RNU6-168P-201ENST00000516189 101 ntBASIC1.65□□□□□ -2.15
SLC44A4Q53GD3 RNU6-947P-201ENST00000516264 106 ntBASIC1.65□□□□□ -2.15
SLC44A4Q53GD3 SNORD111.1-201ENST00000516421 86 ntBASIC1.65□□□□□ -2.15
SLC44A4Q53GD3 SNORA74.3-201ENST00000517108 154 ntBASIC1.65□□□□□ -2.15
SLC44A4Q53GD3 AL513534.2-201ENST00000603836 250 ntBASIC1.65□□□□□ -2.15
SLC44A4Q53GD3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.65□□□□□ -2.15
SLC44A4Q53GD3 AC021613.1-201ENST00000623880 111 ntBASIC1.65□□□□□ -2.15
SLC44A4Q53GD3 Y_RNA.85-201ENST00000363014 111 ntBASIC1.64□□□□□ -2.15
SLC44A4Q53GD3 RNY4P6-201ENST00000363667 96 ntBASIC1.64□□□□□ -2.15
SLC44A4Q53GD3 Y_RNA.362-201ENST00000365518 110 ntBASIC1.64□□□□□ -2.15
SLC44A4Q53GD3 MIR759-201ENST00000390224 91 ntBASIC1.64□□□□□ -2.15
SLC44A4Q53GD3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.64□□□□□ -2.15
SLC44A4Q53GD3 RNA5SP144-201ENST00000410846 116 ntBASIC1.64□□□□□ -2.15
SLC44A4Q53GD3 RNU2-13P-201ENST00000515909 113 ntBASIC1.64□□□□□ -2.15
SLC44A4Q53GD3 RNU6-412P-201ENST00000516434 106 ntBASIC1.64□□□□□ -2.15
SLC44A4Q53GD3 RNU6-1258P-201ENST00000516911 111 ntBASIC1.64□□□□□ -2.15
SLC44A4Q53GD3 MIR4285-201ENST00000581001 85 ntBASIC1.64□□□□□ -2.15
SLC44A4Q53GD3 MIR4422-201ENST00000581938 83 ntBASIC1.64□□□□□ -2.15
SLC44A4Q53GD3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.64□□□□□ -2.15
SLC44A4Q53GD3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.64□□□□□ -2.15
SLC44A4Q53GD3 AP000648.3-201ENST00000623539 4507 ntBASIC1.64□□□□□ -2.15
SLC44A4Q53GD3 Y_RNA.171-201ENST00000363760 102 ntBASIC1.63□□□□□ -2.15
SLC44A4Q53GD3 Y_RNA.344-201ENST00000365381 112 ntBASIC1.63□□□□□ -2.15
SLC44A4Q53GD3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.63□□□□□ -2.15
SLC44A4Q53GD3 RNU6-913P-201ENST00000390913 95 ntBASIC1.63□□□□□ -2.15
SLC44A4Q53GD3 RNU6-554P-201ENST00000410466 106 ntBASIC1.63□□□□□ -2.15
SLC44A4Q53GD3 POLR2J4-204ENST00000418424 324 ntBASIC1.63□□□□□ -2.15
SLC44A4Q53GD3 RPS29P29-201ENST00000456396 171 ntBASIC1.63□□□□□ -2.15
SLC44A4Q53GD3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.63□□□□□ -2.15
SLC44A4Q53GD3 RNU6-970P-201ENST00000516312 107 ntBASIC1.63□□□□□ -2.15
SLC44A4Q53GD3 AC004812.1-201ENST00000540773 146 ntBASIC1.63□□□□□ -2.15
SLC44A4Q53GD3 AL512310.8-201ENST00000550183 120 ntBASIC1.63□□□□□ -2.15
SLC44A4Q53GD3 MIR5582-201ENST00000579697 68 ntBASIC1.63□□□□□ -2.15
SLC44A4Q53GD3 MIR4791-201ENST00000607666 84 ntBASIC1.63□□□□□ -2.15
SLC44A4Q53GD3 AL096861.1-201ENST00000610899 123 ntBASIC1.63□□□□□ -2.15
SLC44A4Q53GD3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.63□□□□□ -2.15
SLC44A4Q53GD3 AC243994.1-201ENST00000618627 109 ntBASIC1.63□□□□□ -2.15
SLC44A4Q53GD3 ZNF209P-201ENST00000593450 2304 ntBASIC1.62□□□□□ -2.15
SLC44A4Q53GD3 SNORD33-201ENST00000362761 85 ntBASIC1.62□□□□□ -2.15
SLC44A4Q53GD3 MIR517C-201ENST00000385103 95 ntBASIC1.62□□□□□ -2.15
SLC44A4Q53GD3 AL031737.1-201ENST00000450125 223 ntBASIC1.62□□□□□ -2.15
SLC44A4Q53GD3 RNU7-41P-201ENST00000515917 61 ntBASIC1.62□□□□□ -2.15
SLC44A4Q53GD3 RNU7-6P-201ENST00000516845 62 ntBASIC1.62□□□□□ -2.15
SLC44A4Q53GD3 RNU1-92P-201ENST00000517017 135 ntBASIC1.62□□□□□ -2.15
SLC44A4Q53GD3 RNU6-165P-201ENST00000517170 99 ntBASIC1.62□□□□□ -2.15
SLC44A4Q53GD3 MIR3664-201ENST00000579074 99 ntBASIC1.62□□□□□ -2.15
SLC44A4Q53GD3 MIR4764-201ENST00000580680 88 ntBASIC1.62□□□□□ -2.15
SLC44A4Q53GD3 SNORA4-201ENST00000584302 138 ntBASIC1.62□□□□□ -2.15
SLC44A4Q53GD3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
SLC44A4Q53GD3 SNORA24-201ENST00000384096 131 ntBASIC1.61□□□□□ -2.15
SLC44A4Q53GD3 RNU6-905P-201ENST00000384434 107 ntBASIC1.61□□□□□ -2.15
SLC44A4Q53GD3 MIR520C-201ENST00000385005 87 ntBASIC1.61□□□□□ -2.15
SLC44A4Q53GD3 RNU6-1319P-201ENST00000390855 104 ntBASIC1.61□□□□□ -2.15
SLC44A4Q53GD3 RNU6-747P-201ENST00000390928 104 ntBASIC1.61□□□□□ -2.15
SLC44A4Q53GD3 RNU6-241P-201ENST00000391148 104 ntBASIC1.61□□□□□ -2.15
SLC44A4Q53GD3 RNU6-177P-201ENST00000411257 104 ntBASIC1.61□□□□□ -2.15
SLC44A4Q53GD3 AL022718.1-201ENST00000412004 84 ntBASIC1.61□□□□□ -2.15
SLC44A4Q53GD3 HMGN1P33-201ENST00000432945 451 ntBASIC1.61□□□□□ -2.15
SLC44A4Q53GD3 AL589743.1-201ENST00000551932 2712 ntBASIC1.6□□□□□ -2.15
SLC44A4Q53GD3 RNU6-640P-201ENST00000363693 105 ntBASIC1.6□□□□□ -2.15
SLC44A4Q53GD3 RNU6-1014P-201ENST00000383940 103 ntBASIC1.6□□□□□ -2.15
SLC44A4Q53GD3 Y_RNA.466-201ENST00000384294 113 ntBASIC1.6□□□□□ -2.15
SLC44A4Q53GD3 Y_RNA.495-201ENST00000384435 112 ntBASIC1.6□□□□□ -2.15
SLC44A4Q53GD3 Y_RNA.531-201ENST00000384589 121 ntBASIC1.6□□□□□ -2.15
SLC44A4Q53GD3 MIR548D2-201ENST00000384955 97 ntBASIC1.6□□□□□ -2.15
SLC44A4Q53GD3 SNORA26.6-201ENST00000391256 115 ntBASIC1.6□□□□□ -2.15
SLC44A4Q53GD3 RPL39P34-201ENST00000477141 156 ntBASIC1.6□□□□□ -2.15
SLC44A4Q53GD3 RNU6-902P-201ENST00000517212 91 ntBASIC1.6□□□□□ -2.15
SLC44A4Q53GD3 MIR4421-201ENST00000578133 69 ntBASIC1.6□□□□□ -2.15
SLC44A4Q53GD3 MIR3192-201ENST00000584920 77 ntBASIC1.6□□□□□ -2.15
SLC44A4Q53GD3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.6□□□□□ -2.15
SLC44A4Q53GD3 U8.6-201ENST00000364939 135 ntBASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 SNORA70.7-201ENST00000384159 133 ntBASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 Y_RNA.470-201ENST00000384307 117 ntBASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 SNORA51.10-201ENST00000384418 136 ntBASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 snoU13.25-201ENST00000458945 104 ntBASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 RNU7-53P-201ENST00000516705 60 ntBASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 SNORA31.24-201ENST00000517232 57 ntBASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 CYP3A52P-201ENST00000563326 91 ntBASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 MIR3163-201ENST00000581592 73 ntBASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 AL020996.3-201ENST00000606617 222 ntBASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 AL157834.3-201ENST00000615543 103 ntBASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 AC087741.2-201ENST00000619415 172 ntBASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 MIR6717-201ENST00000622747 73 ntBASIC1.59□□□□□ -2.15
SLC44A4Q53GD3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SLC44A4Q53GD3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SLC44A4Q53GD3 SNORA22.1-201ENST00000362701 134 ntBASIC1.58□□□□□ -2.16
SLC44A4Q53GD3 Y_RNA.163-201ENST00000363702 113 ntBASIC1.58□□□□□ -2.16
SLC44A4Q53GD3 Y_RNA.348-201ENST00000365403 103 ntBASIC1.58□□□□□ -2.16
SLC44A4Q53GD3 Y_RNA.537-201ENST00000384626 109 ntBASIC1.58□□□□□ -2.16
SLC44A4Q53GD3 RNU6-955P-201ENST00000410497 104 ntBASIC1.58□□□□□ -2.16
SLC44A4Q53GD3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.58□□□□□ -2.16
SLC44A4Q53GD3 RNU7-113P-201ENST00000459273 62 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms