Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 Y_RNA.322-201ENST00000365151 102 ntBASIC0.31□□□□□ -2.36
LRIT3Q3SXY7 Y_RNA.454-201ENST00000384224 113 ntBASIC0.31□□□□□ -2.36
LRIT3Q3SXY7 MIR563-201ENST00000385080 79 ntBASIC0.31□□□□□ -2.36
LRIT3Q3SXY7 Y_RNA.650-201ENST00000459002 102 ntBASIC0.31□□□□□ -2.36
LRIT3Q3SXY7 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
LRIT3Q3SXY7 Y_RNA.777-201ENST00000516982 102 ntBASIC0.31□□□□□ -2.36
LRIT3Q3SXY7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.31□□□□□ -2.36
LRIT3Q3SXY7 Y_RNA.771-201ENST00000598668 102 ntBASIC0.31□□□□□ -2.36
LRIT3Q3SXY7 AC008608.1-201ENST00000603910 127 ntBASIC0.31□□□□□ -2.36
LRIT3Q3SXY7 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.31□□□□□ -2.36
LRIT3Q3SXY7 U2.14-201ENST00000615943 113 ntBASIC0.31□□□□□ -2.36
LRIT3Q3SXY7 Y_RNA.789-201ENST00000622480 102 ntBASIC0.31□□□□□ -2.36
LRIT3Q3SXY7 MIR6717-201ENST00000622747 73 ntBASIC0.31□□□□□ -2.36
LRIT3Q3SXY7 Y_RNA.185-201ENST00000363894 100 ntBASIC0.3□□□□□ -2.36
LRIT3Q3SXY7 Y_RNA.542-201ENST00000384641 111 ntBASIC0.3□□□□□ -2.36
LRIT3Q3SXY7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
LRIT3Q3SXY7 RNU6-1109P-201ENST00000391187 107 ntBASIC0.3□□□□□ -2.36
LRIT3Q3SXY7 RNA5SP237-201ENST00000410414 113 ntBASIC0.3□□□□□ -2.36
LRIT3Q3SXY7 SNORD2.1-201ENST00000458762 69 ntBASIC0.3□□□□□ -2.36
LRIT3Q3SXY7 Y_RNA.701-201ENST00000516812 110 ntBASIC0.3□□□□□ -2.36
LRIT3Q3SXY7 RNU6-448P-201ENST00000517052 107 ntBASIC0.3□□□□□ -2.36
LRIT3Q3SXY7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.3□□□□□ -2.36
LRIT3Q3SXY7 MIR3152-201ENST00000579801 74 ntBASIC0.3□□□□□ -2.36
LRIT3Q3SXY7 AP001282.2-201ENST00000616149 309 ntBASIC0.3□□□□□ -2.36
LRIT3Q3SXY7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.29□□□□□ -2.36
LRIT3Q3SXY7 MIR30D-201ENST00000362283 70 ntBASIC0.29□□□□□ -2.36
LRIT3Q3SXY7 snoU2_19.4-201ENST00000364329 80 ntBASIC0.29□□□□□ -2.36
LRIT3Q3SXY7 RNU6-728P-201ENST00000365375 104 ntBASIC0.29□□□□□ -2.36
LRIT3Q3SXY7 SNORD93-201ENST00000408813 74 ntBASIC0.29□□□□□ -2.36
LRIT3Q3SXY7 SNORA40.8-201ENST00000411034 126 ntBASIC0.29□□□□□ -2.36
LRIT3Q3SXY7 RNU6-453P-201ENST00000516819 85 ntBASIC0.29□□□□□ -2.36
LRIT3Q3SXY7 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.29□□□□□ -2.36
LRIT3Q3SXY7 MIR335-201ENST00000362173 94 ntBASIC0.28□□□□□ -2.36
LRIT3Q3SXY7 RNU6-653P-201ENST00000363074 106 ntBASIC0.28□□□□□ -2.36
LRIT3Q3SXY7 SNORA1-201ENST00000384107 130 ntBASIC0.28□□□□□ -2.36
LRIT3Q3SXY7 SNORA20-201ENST00000384662 132 ntBASIC0.28□□□□□ -2.36
LRIT3Q3SXY7 Y_RNA.618-201ENST00000410949 107 ntBASIC0.28□□□□□ -2.36
LRIT3Q3SXY7 RNU7-70P-201ENST00000516941 66 ntBASIC0.28□□□□□ -2.36
LRIT3Q3SXY7 MIR3129-201ENST00000581095 76 ntBASIC0.28□□□□□ -2.36
LRIT3Q3SXY7 AL365265.1-201ENST00000621045 234 ntBASIC0.28□□□□□ -2.36
LRIT3Q3SXY7 Y_RNA.23-201ENST00000362496 106 ntBASIC0.27□□□□□ -2.37
LRIT3Q3SXY7 RNA5SP517-201ENST00000364724 117 ntBASIC0.27□□□□□ -2.37
LRIT3Q3SXY7 MIR518A1-201ENST00000385068 85 ntBASIC0.27□□□□□ -2.37
LRIT3Q3SXY7 SNORA26.6-201ENST00000391256 115 ntBASIC0.27□□□□□ -2.37
LRIT3Q3SXY7 MIR1302-6-201ENST00000408466 90 ntBASIC0.27□□□□□ -2.37
LRIT3Q3SXY7 RNU7-45P-201ENST00000459460 63 ntBASIC0.27□□□□□ -2.37
LRIT3Q3SXY7 RNA5SP94-201ENST00000516917 108 ntBASIC0.27□□□□□ -2.37
LRIT3Q3SXY7 AC022523.2-201ENST00000561045 150 ntBASIC0.27□□□□□ -2.37
LRIT3Q3SXY7 AL596211.1-201ENST00000569873 2277 ntBASIC0.26□□□□□ -2.37
LRIT3Q3SXY7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.26□□□□□ -2.37
LRIT3Q3SXY7 RNU4-17P-201ENST00000365598 141 ntBASIC0.26□□□□□ -2.37
LRIT3Q3SXY7 Y_RNA.422-201ENST00000384054 114 ntBASIC0.26□□□□□ -2.37
LRIT3Q3SXY7 RNU4-83P-201ENST00000410863 133 ntBASIC0.26□□□□□ -2.37
LRIT3Q3SXY7 RNU6-651P-201ENST00000411040 105 ntBASIC0.26□□□□□ -2.37
LRIT3Q3SXY7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.26□□□□□ -2.37
LRIT3Q3SXY7 MTCYBP6-201ENST00000441810 138 ntBASIC0.26□□□□□ -2.37
LRIT3Q3SXY7 RNU6-635P-201ENST00000516651 102 ntBASIC0.26□□□□□ -2.37
LRIT3Q3SXY7 MIR3678-201ENST00000578455 94 ntBASIC0.26□□□□□ -2.37
LRIT3Q3SXY7 MIR5197-201ENST00000583721 112 ntBASIC0.26□□□□□ -2.37
LRIT3Q3SXY7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.26□□□□□ -2.37
LRIT3Q3SXY7 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.26□□□□□ -2.37
LRIT3Q3SXY7 Y_RNA.176-201ENST00000363815 109 ntBASIC0.25□□□□□ -2.37
LRIT3Q3SXY7 RNU6-381P-201ENST00000391259 108 ntBASIC0.25□□□□□ -2.37
LRIT3Q3SXY7 Y_RNA.604-201ENST00000410574 102 ntBASIC0.25□□□□□ -2.37
LRIT3Q3SXY7 RNU6-469P-201ENST00000516253 101 ntBASIC0.25□□□□□ -2.37
LRIT3Q3SXY7 IGLVI-20-201ENST00000519296 130 ntBASIC0.25□□□□□ -2.37
LRIT3Q3SXY7 AL442663.2-201ENST00000554385 511 ntBASIC0.25□□□□□ -2.37
LRIT3Q3SXY7 AL662814.1-201ENST00000617364 121 ntBASIC0.25□□□□□ -2.37
LRIT3Q3SXY7 AC091932.4-201ENST00000623386 200 ntBASIC0.25□□□□□ -2.37
LRIT3Q3SXY7 RNU6-238P-201ENST00000363313 106 ntBASIC0.24□□□□□ -2.37
LRIT3Q3SXY7 RNU6-103P-201ENST00000363686 107 ntBASIC0.24□□□□□ -2.37
LRIT3Q3SXY7 Y_RNA.262-201ENST00000364641 102 ntBASIC0.24□□□□□ -2.37
LRIT3Q3SXY7 RNU6-1292P-201ENST00000383856 107 ntBASIC0.24□□□□□ -2.37
LRIT3Q3SXY7 RNU6-1227P-201ENST00000383981 107 ntBASIC0.24□□□□□ -2.37
LRIT3Q3SXY7 Y_RNA.430-201ENST00000384081 110 ntBASIC0.24□□□□□ -2.37
LRIT3Q3SXY7 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
LRIT3Q3SXY7 MIR4282-201ENST00000583613 67 ntBASIC0.24□□□□□ -2.37
LRIT3Q3SXY7 MIR409-201ENST00000362237 79 ntBASIC0.23□□□□□ -2.37
LRIT3Q3SXY7 Y_RNA.416-201ENST00000384014 113 ntBASIC0.23□□□□□ -2.37
LRIT3Q3SXY7 Y_RNA.461-201ENST00000384263 103 ntBASIC0.23□□□□□ -2.37
LRIT3Q3SXY7 Y_RNA.567-201ENST00000384736 106 ntBASIC0.23□□□□□ -2.37
LRIT3Q3SXY7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.23□□□□□ -2.37
LRIT3Q3SXY7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.23□□□□□ -2.37
LRIT3Q3SXY7 SEPT7P4-201ENST00000437076 306 ntBASIC0.23□□□□□ -2.37
LRIT3Q3SXY7 MIR4768-201ENST00000585270 74 ntBASIC0.23□□□□□ -2.37
LRIT3Q3SXY7 AL365205.2-201ENST00000594586 68 ntBASIC0.23□□□□□ -2.37
LRIT3Q3SXY7 MTRNR2L2-201ENST00000604882 87 ntBASIC0.23□□□□□ -2.37
LRIT3Q3SXY7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.23□□□□□ -2.37
LRIT3Q3SXY7 SNORA8.2-201ENST00000384372 139 ntBASIC0.22□□□□□ -2.37
LRIT3Q3SXY7 Y_RNA.512-201ENST00000384518 102 ntBASIC0.22□□□□□ -2.37
LRIT3Q3SXY7 SNRPGP12-201ENST00000449481 213 ntBASIC0.22□□□□□ -2.37
LRIT3Q3SXY7 SNORA25.18-201ENST00000607153 114 ntBASIC0.22□□□□□ -2.37
LRIT3Q3SXY7 MIR8062-201ENST00000621515 85 ntBASIC0.22□□□□□ -2.37
LRIT3Q3SXY7 MIR376A2-201ENST00000636782 80 ntBASIC0.22□□□□□ -2.37
LRIT3Q3SXY7 MIR103A1-201ENST00000362165 78 ntBASIC0.21□□□□□ -2.38
LRIT3Q3SXY7 Y_RNA.11-201ENST00000362375 109 ntBASIC0.21□□□□□ -2.38
LRIT3Q3SXY7 RNU6-403P-201ENST00000363163 104 ntBASIC0.21□□□□□ -2.38
LRIT3Q3SXY7 SNORD44.1-201ENST00000363202 61 ntBASIC0.21□□□□□ -2.38
LRIT3Q3SXY7 RNA5SP368-201ENST00000364298 116 ntBASIC0.21□□□□□ -2.38
LRIT3Q3SXY7 RNU4-43P-201ENST00000410628 137 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 230 ms