Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 MIR644A-201ENST00000385262 94 ntBASIC0.21□□□□□ -2.38
SMARCB1Q12824 Y_RNA.588-201ENST00000391254 102 ntBASIC0.21□□□□□ -2.38
SMARCB1Q12824 RNU4-83P-201ENST00000410863 133 ntBASIC0.21□□□□□ -2.38
SMARCB1Q12824 SNORA40.8-201ENST00000411034 126 ntBASIC0.21□□□□□ -2.38
SMARCB1Q12824 RNU6-863P-201ENST00000515989 104 ntBASIC0.21□□□□□ -2.38
SMARCB1Q12824 RNY3P16-201ENST00000516338 101 ntBASIC0.21□□□□□ -2.38
SMARCB1Q12824 AL365205.2-201ENST00000594586 68 ntBASIC0.21□□□□□ -2.38
SMARCB1Q12824 AC078938.1-201ENST00000620993 318 ntBASIC0.21□□□□□ -2.38
SMARCB1Q12824 AL596211.1-201ENST00000569873 2277 ntBASIC0.21□□□□□ -2.38
SMARCB1Q12824 MIR302B-201ENST00000362188 73 ntBASIC0.2□□□□□ -2.38
SMARCB1Q12824 RNA5SP457-201ENST00000363657 124 ntBASIC0.2□□□□□ -2.38
SMARCB1Q12824 RNU6-978P-201ENST00000364371 103 ntBASIC0.2□□□□□ -2.38
SMARCB1Q12824 RNU4-17P-201ENST00000365598 141 ntBASIC0.2□□□□□ -2.38
SMARCB1Q12824 Y_RNA.396-201ENST00000383949 103 ntBASIC0.2□□□□□ -2.38
SMARCB1Q12824 Y_RNA.430-201ENST00000384081 110 ntBASIC0.2□□□□□ -2.38
SMARCB1Q12824 Y_RNA.542-201ENST00000384641 111 ntBASIC0.2□□□□□ -2.38
SMARCB1Q12824 RNU6-713P-201ENST00000384761 107 ntBASIC0.2□□□□□ -2.38
SMARCB1Q12824 SNORD93-201ENST00000408813 74 ntBASIC0.2□□□□□ -2.38
SMARCB1Q12824 AL358176.2-201ENST00000425769 204 ntBASIC0.2□□□□□ -2.38
SMARCB1Q12824 SCARNA15-202ENST00000516881 127 ntBASIC0.2□□□□□ -2.38
SMARCB1Q12824 RNA5SP330-201ENST00000517096 96 ntBASIC0.2□□□□□ -2.38
SMARCB1Q12824 AC044792.1-201ENST00000593294 196 ntBASIC0.2□□□□□ -2.38
SMARCB1Q12824 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
SMARCB1Q12824 Y_RNA.13-201ENST00000362403 112 ntBASIC0.19□□□□□ -2.38
SMARCB1Q12824 Y_RNA.258-201ENST00000364613 105 ntBASIC0.19□□□□□ -2.38
SMARCB1Q12824 Y_RNA.567-201ENST00000384736 106 ntBASIC0.19□□□□□ -2.38
SMARCB1Q12824 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
SMARCB1Q12824 RNU4-43P-201ENST00000410628 137 ntBASIC0.19□□□□□ -2.38
SMARCB1Q12824 SEPT7P4-201ENST00000437076 306 ntBASIC0.19□□□□□ -2.38
SMARCB1Q12824 Y_RNA.679-201ENST00000516416 91 ntBASIC0.19□□□□□ -2.38
SMARCB1Q12824 AP003072.1-201ENST00000531740 145 ntBASIC0.19□□□□□ -2.38
SMARCB1Q12824 AC022523.2-201ENST00000561045 150 ntBASIC0.19□□□□□ -2.38
SMARCB1Q12824 AC141846.1-201ENST00000568348 142 ntBASIC0.19□□□□□ -2.38
SMARCB1Q12824 MIR4514-201ENST00000581410 57 ntBASIC0.19□□□□□ -2.38
SMARCB1Q12824 Y_RNA.32-201ENST00000362589 110 ntBASIC0.18□□□□□ -2.38
SMARCB1Q12824 RNU6-1327P-201ENST00000365302 105 ntBASIC0.18□□□□□ -2.38
SMARCB1Q12824 RNU6-1292P-201ENST00000383856 107 ntBASIC0.18□□□□□ -2.38
SMARCB1Q12824 Y_RNA.618-201ENST00000410949 107 ntBASIC0.18□□□□□ -2.38
SMARCB1Q12824 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.18□□□□□ -2.38
SMARCB1Q12824 RNU6-1258P-201ENST00000516911 111 ntBASIC0.18□□□□□ -2.38
SMARCB1Q12824 Y_RNA.720-201ENST00000517166 92 ntBASIC0.18□□□□□ -2.38
SMARCB1Q12824 MIR4491-201ENST00000581087 68 ntBASIC0.18□□□□□ -2.38
SMARCB1Q12824 uc_338.16-201ENST00000621804 95 ntBASIC0.18□□□□□ -2.38
SMARCB1Q12824 SNORA22.1-201ENST00000362701 134 ntBASIC0.17□□□□□ -2.38
SMARCB1Q12824 RNU4-16P-201ENST00000364737 141 ntBASIC0.17□□□□□ -2.38
SMARCB1Q12824 Y_RNA.277-201ENST00000364754 102 ntBASIC0.17□□□□□ -2.38
SMARCB1Q12824 RNA5SP117-201ENST00000365294 118 ntBASIC0.17□□□□□ -2.38
SMARCB1Q12824 RNU6-728P-201ENST00000365375 104 ntBASIC0.17□□□□□ -2.38
SMARCB1Q12824 Y_RNA.574-201ENST00000384766 95 ntBASIC0.17□□□□□ -2.38
SMARCB1Q12824 RNU2-38P-201ENST00000410856 79 ntBASIC0.17□□□□□ -2.38
SMARCB1Q12824 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.17□□□□□ -2.38
SMARCB1Q12824 MIR6082-201ENST00000613604 109 ntBASIC0.17□□□□□ -2.38
SMARCB1Q12824 AC021613.1-201ENST00000623880 111 ntBASIC0.17□□□□□ -2.38
SMARCB1Q12824 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
SMARCB1Q12824 RNU6-403P-201ENST00000363163 104 ntBASIC0.16□□□□□ -2.38
SMARCB1Q12824 RNA5SP62-201ENST00000363457 110 ntBASIC0.16□□□□□ -2.38
SMARCB1Q12824 RNU4-67P-201ENST00000364569 141 ntBASIC0.16□□□□□ -2.38
SMARCB1Q12824 Y_RNA.292-201ENST00000364904 97 ntBASIC0.16□□□□□ -2.38
SMARCB1Q12824 Y_RNA.326-201ENST00000365176 113 ntBASIC0.16□□□□□ -2.38
SMARCB1Q12824 RNU6-815P-201ENST00000384080 113 ntBASIC0.16□□□□□ -2.38
SMARCB1Q12824 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
SMARCB1Q12824 MIR1302-6-201ENST00000408466 90 ntBASIC0.16□□□□□ -2.38
SMARCB1Q12824 RNA5SP237-201ENST00000410414 113 ntBASIC0.16□□□□□ -2.38
SMARCB1Q12824 SNORD71-201ENST00000411292 86 ntBASIC0.16□□□□□ -2.38
SMARCB1Q12824 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.16□□□□□ -2.38
SMARCB1Q12824 RNU7-80P-201ENST00000459562 61 ntBASIC0.16□□□□□ -2.38
SMARCB1Q12824 SNORA31.14-201ENST00000516728 116 ntBASIC0.16□□□□□ -2.38
SMARCB1Q12824 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.16□□□□□ -2.38
SMARCB1Q12824 Y_RNA.262-201ENST00000364641 102 ntBASIC0.15□□□□□ -2.39
SMARCB1Q12824 Y_RNA.476-201ENST00000384347 108 ntBASIC0.15□□□□□ -2.39
SMARCB1Q12824 RNA5SP261-201ENST00000410536 106 ntBASIC0.15□□□□□ -2.39
SMARCB1Q12824 AP003327.1-201ENST00000529684 127 ntBASIC0.15□□□□□ -2.39
SMARCB1Q12824 MTND5P34-201ENST00000568888 325 ntBASIC0.15□□□□□ -2.39
SMARCB1Q12824 Y_RNA.54-201ENST00000362766 105 ntBASIC0.14□□□□□ -2.39
SMARCB1Q12824 RNY1P13-201ENST00000365030 105 ntBASIC0.14□□□□□ -2.39
SMARCB1Q12824 Y_RNA.352-201ENST00000365439 102 ntBASIC0.14□□□□□ -2.39
SMARCB1Q12824 RNU6-1336P-201ENST00000383886 109 ntBASIC0.14□□□□□ -2.39
SMARCB1Q12824 RNU6-949P-201ENST00000384040 107 ntBASIC0.14□□□□□ -2.39
SMARCB1Q12824 Y_RNA.454-201ENST00000384224 113 ntBASIC0.14□□□□□ -2.39
SMARCB1Q12824 SNORA18-201ENST00000384416 132 ntBASIC0.14□□□□□ -2.39
SMARCB1Q12824 RNU6-1160P-201ENST00000384546 104 ntBASIC0.14□□□□□ -2.39
SMARCB1Q12824 RNA5SP63-201ENST00000391225 112 ntBASIC0.14□□□□□ -2.39
SMARCB1Q12824 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
SMARCB1Q12824 SNORA25.16-201ENST00000516741 121 ntBASIC0.14□□□□□ -2.39
SMARCB1Q12824 RNU6-1149P-201ENST00000516810 97 ntBASIC0.14□□□□□ -2.39
SMARCB1Q12824 MIR4744-201ENST00000581563 82 ntBASIC0.14□□□□□ -2.39
SMARCB1Q12824 MIR7107-201ENST00000611489 80 ntBASIC0.14□□□□□ -2.39
SMARCB1Q12824 MIR6755-201ENST00000619993 66 ntBASIC0.14□□□□□ -2.39
SMARCB1Q12824 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
SMARCB1Q12824 RNU6-103P-201ENST00000363686 107 ntBASIC0.13□□□□□ -2.39
SMARCB1Q12824 Y_RNA.308-201ENST00000365043 101 ntBASIC0.13□□□□□ -2.39
SMARCB1Q12824 RNU6-291P-201ENST00000384720 107 ntBASIC0.13□□□□□ -2.39
SMARCB1Q12824 RNU6-578P-201ENST00000390980 103 ntBASIC0.13□□□□□ -2.39
SMARCB1Q12824 RNU6-493P-201ENST00000391321 108 ntBASIC0.13□□□□□ -2.39
SMARCB1Q12824 MIR1197-201ENST00000408818 88 ntBASIC0.13□□□□□ -2.39
SMARCB1Q12824 AL512326.2-201ENST00000426359 151 ntBASIC0.13□□□□□ -2.39
SMARCB1Q12824 AL121914.1-201ENST00000450188 156 ntBASIC0.13□□□□□ -2.39
SMARCB1Q12824 AC069113.3-201ENST00000521019 150 ntBASIC0.13□□□□□ -2.39
SMARCB1Q12824 MIR4308-201ENST00000580634 81 ntBASIC0.13□□□□□ -2.39
SMARCB1Q12824 MIR378D2-201ENST00000580636 98 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 3175 ms