Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNU6-243P-201ENST00000391140 107 ntBASIC-0.73□□□□□ -2.53
HSPG2P98160 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.73□□□□□ -2.53
HSPG2P98160 MIR548O2-201ENST00000616090 70 ntBASIC-0.73□□□□□ -2.53
HSPG2P98160 AC006386.1-201ENST00000619436 415 ntBASIC-0.73□□□□□ -2.53
HSPG2P98160 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.73□□□□□ -2.53
HSPG2P98160 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.73□□□□□ -2.53
HSPG2P98160 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.73□□□□□ -2.53
HSPG2P98160 AL160004.2-201ENST00000432935 350 ntBASIC-0.73□□□□□ -2.53
HSPG2P98160 AL353691.2-201ENST00000443795 59 ntBASIC-0.73□□□□□ -2.53
HSPG2P98160 RNU7-87P-201ENST00000459343 62 ntBASIC-0.73□□□□□ -2.53
HSPG2P98160 AC009161.2-201ENST00000624626 138 ntBASIC-0.73□□□□□ -2.53
HSPG2P98160 AC099654.14-201ENST00000638599 341 ntBASIC-0.73□□□□□ -2.53
HSPG2P98160 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 SNORD115-20-201ENST00000365099 82 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 RNU6-412P-201ENST00000516434 106 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 MRPS36P3-201ENST00000519284 130 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.74□□□□□ -2.53
HSPG2P98160 AC005357.1-201ENST00000588399 301 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 RNU6-170P-201ENST00000362832 104 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 SNORA2.1-201ENST00000363089 137 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 SNORD63B-201ENST00000411005 70 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 MTND3P1-201ENST00000441336 220 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 RNU6-911P-201ENST00000516523 104 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.74□□□□□ -2.53
HSPG2P98160 MIR3913-1-201ENST00000577744 102 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 AC021613.1-201ENST00000623880 111 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 RNU6-595P-201ENST00000363944 107 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 RNU6-144P-201ENST00000383951 107 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 SNORA26.4-201ENST00000391188 123 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 RNU7-113P-201ENST00000459273 62 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 RNU7-115P-201ENST00000516433 55 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 MIR5696-201ENST00000578474 85 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 MIR6773-201ENST00000612812 74 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 AC004467.1-201ENST00000615678 330 ntBASIC-0.74□□□□□ -2.53
HSPG2P98160 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 RNY1P11-201ENST00000363759 113 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 AL606845.1-201ENST00000404881 255 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 AC097510.1-201ENST00000510945 133 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.75□□□□□ -2.53
HSPG2P98160 TARS-215ENST00000626210 201 ntTSL 5 BASIC-0.75□□□□□ -2.53
HSPG2P98160 RNA5SP26-201ENST00000362406 119 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 AL033528.1-201ENST00000453780 140 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 AC091951.2-201ENST00000500762 203 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 AC144568.1-201ENST00000520139 137 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 MIR466-201ENST00000580653 84 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 MIR4464-201ENST00000580818 92 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 MIR3682-201ENST00000581338 84 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 AC091932.4-201ENST00000623386 200 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 RNU6-235P-201ENST00000362644 107 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 RNU6-704P-201ENST00000364162 103 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 SNORD101-201ENST00000384027 73 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 RNU2-55P-201ENST00000411146 174 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 AC018880.2-201ENST00000414265 201 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 AP002963.1-201ENST00000530590 184 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 RNU6-961P-201ENST00000363893 105 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 RNU6-128P-201ENST00000383976 107 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 SNORD61-201ENST00000384252 73 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 SNORD37.1-201ENST00000390968 65 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 RNU6-126P-201ENST00000516685 103 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 AL359881.1-201ENST00000602916 267 ntBASIC-0.75□□□□□ -2.53
HSPG2P98160 AL589826.1-201ENST00000340697 249 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 RNU6-194P-201ENST00000363862 105 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 RNU6-660P-201ENST00000364566 109 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 SNORD67.1-201ENST00000516618 108 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 AL118558.2-201ENST00000556294 238 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 MIR4424-201ENST00000585257 86 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 MIR664B-201ENST00000626756 61 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 RNU6-879P-201ENST00000364328 108 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 RNU6-155P-201ENST00000516347 100 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 MTND4P7-201ENST00000523876 130 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 MIR4490-201ENST00000582647 84 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 AL158211.2-201ENST00000607282 395 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 SNORA63.6-201ENST00000364921 119 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 RNU6-996P-201ENST00000365438 107 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 RNY3P4-201ENST00000384428 101 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 AP001506.1-201ENST00000615444 211 ntBASIC-0.76□□□□□ -2.53
HSPG2P98160 RNU6-254P-201ENST00000363377 107 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 RNU6-54P-201ENST00000365563 107 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms