Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MIR548AG2-201ENST00000581228 64 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 AC009161.2-201ENST00000624626 138 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 RNU7-48P-201ENST00000458875 63 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 MTND4P7-201ENST00000523876 130 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 AC005357.1-201ENST00000588399 301 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 AC006566.1-201ENST00000608943 513 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 RNU7-137P-201ENST00000516788 62 ntBASIC-1.26□□□□□ -2.61
PRKDCP78527 RNU6-850P-201ENST00000516934 103 ntBASIC-1.26□□□□□ -2.61
PRKDCP78527 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.26□□□□□ -2.61
PRKDCP78527 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.26□□□□□ -2.61
PRKDCP78527 RNU6-470P-201ENST00000515954 104 ntBASIC-1.26□□□□□ -2.61
PRKDCP78527 Vault.3-201ENST00000516676 95 ntBASIC-1.26□□□□□ -2.61
PRKDCP78527 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.26□□□□□ -2.61
PRKDCP78527 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.26□□□□□ -2.61
PRKDCP78527 MTCO2P21-201ENST00000419780 677 ntBASIC-1.26□□□□□ -2.61
PRKDCP78527 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 AC018880.2-201ENST00000414265 201 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.27□□□□□ -2.61
PRKDCP78527 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 AC104576.1-201ENST00000524225 88 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 AC141846.1-201ENST00000568348 142 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 MIR539-201ENST00000365690 78 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 RNU6-128P-201ENST00000383976 107 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 RNU6-243P-201ENST00000391140 107 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 MIR548AE1-201ENST00000583292 70 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 MIR4999-201ENST00000585029 91 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 RNU6-170P-201ENST00000362832 104 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 RNY1P2-201ENST00000364820 117 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 SNORD63.1-201ENST00000516178 80 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 MIR3682-201ENST00000581338 84 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 AC091932.4-201ENST00000623386 200 ntBASIC-1.27□□□□□ -2.61
PRKDCP78527 AC104850.1-201ENST00000435940 476 ntBASIC-1.28□□□□□ -2.61
PRKDCP78527 AP002963.1-201ENST00000530590 184 ntBASIC-1.28□□□□□ -2.61
PRKDCP78527 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.28□□□□□ -2.61
PRKDCP78527 MTATP6P24-201ENST00000576835 677 ntBASIC-1.28□□□□□ -2.61
PRKDCP78527 MIR3913-1-201ENST00000577744 102 ntBASIC-1.28□□□□□ -2.61
PRKDCP78527 PART1_1.1-201ENST00000611761 217 ntBASIC-1.28□□□□□ -2.61
PRKDCP78527 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.28□□□□□ -2.61
PRKDCP78527 RNU6-924P-201ENST00000362926 108 ntBASIC-1.28□□□□□ -2.61
PRKDCP78527 AL512427.1-201ENST00000618593 349 ntBASIC-1.28□□□□□ -2.61
PRKDCP78527 MIR190B-201ENST00000401119 79 ntBASIC-1.29□□□□□ -2.62
PRKDCP78527 RNU2-55P-201ENST00000411146 174 ntBASIC-1.29□□□□□ -2.62
PRKDCP78527 AC145423.2-201ENST00000610631 239 ntBASIC-1.29□□□□□ -2.62
PRKDCP78527 RNU6-144P-201ENST00000383951 107 ntBASIC-1.29□□□□□ -2.62
PRKDCP78527 MIR4308-201ENST00000580634 81 ntBASIC-1.29□□□□□ -2.62
PRKDCP78527 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.29□□□□□ -2.62
PRKDCP78527 RNU6-595P-201ENST00000363944 107 ntBASIC-1.29□□□□□ -2.62
PRKDCP78527 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.29□□□□□ -2.62
PRKDCP78527 MIR4273-201ENST00000582824 84 ntBASIC-1.29□□□□□ -2.62
PRKDCP78527 AP003357.1-201ENST00000604497 148 ntBASIC-1.29□□□□□ -2.62
PRKDCP78527 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.3□□□□□ -2.62
PRKDCP78527 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.3□□□□□ -2.62
PRKDCP78527 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.3□□□□□ -2.62
PRKDCP78527 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.3□□□□□ -2.62
PRKDCP78527 MIR4500-201ENST00000579472 76 ntBASIC-1.3□□□□□ -2.62
PRKDCP78527 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.3□□□□□ -2.62
PRKDCP78527 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.3□□□□□ -2.62
PRKDCP78527 RNU6-596P-201ENST00000365395 98 ntBASIC-1.3□□□□□ -2.62
PRKDCP78527 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.3□□□□□ -2.62
PRKDCP78527 SNORD11-201ENST00000459124 84 ntBASIC-1.3□□□□□ -2.62
PRKDCP78527 AL669831.3-213ENST00000636676 183 ntBASIC-1.3□□□□□ -2.62
PRKDCP78527 SNORD101-201ENST00000384027 73 ntBASIC-1.3□□□□□ -2.62
PRKDCP78527 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.3□□□□□ -2.62
PRKDCP78527 RNU6-476P-201ENST00000384726 107 ntBASIC-1.3□□□□□ -2.62
PRKDCP78527 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.3□□□□□ -2.62
PRKDCP78527 AL353193.1-201ENST00000421444 268 ntBASIC-1.3□□□□□ -2.62
PRKDCP78527 AL049861.1-201ENST00000603130 150 ntBASIC-1.3□□□□□ -2.62
PRKDCP78527 RNU6-571P-201ENST00000384128 107 ntBASIC-1.31□□□□□ -2.62
PRKDCP78527 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.31□□□□□ -2.62
PRKDCP78527 AC016550.1-201ENST00000505348 785 ntBASIC-1.31□□□□□ -2.62
PRKDCP78527 SNORA19.3-201ENST00000516165 130 ntBASIC-1.31□□□□□ -2.62
PRKDCP78527 RNU6-1028P-201ENST00000517164 93 ntBASIC-1.31□□□□□ -2.62
PRKDCP78527 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.31□□□□□ -2.62
PRKDCP78527 RNU4-10P-201ENST00000364383 140 ntBASIC-1.31□□□□□ -2.62
PRKDCP78527 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.31□□□□□ -2.62
PRKDCP78527 MIR519A1-201ENST00000385257 85 ntBASIC-1.31□□□□□ -2.62
PRKDCP78527 AC097510.1-201ENST00000510945 133 ntBASIC-1.31□□□□□ -2.62
PRKDCP78527 SNORD36C-201ENST00000516733 66 ntBASIC-1.31□□□□□ -2.62
PRKDCP78527 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.31□□□□□ -2.62
PRKDCP78527 RNY4P10-201ENST00000365571 96 ntBASIC-1.31□□□□□ -2.62
PRKDCP78527 RNU7-141P-201ENST00000459304 62 ntBASIC-1.31□□□□□ -2.62
PRKDCP78527 AL118558.2-201ENST00000556294 238 ntBASIC-1.31□□□□□ -2.62
PRKDCP78527 RNU6-254P-201ENST00000363377 107 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 RNU6-660P-201ENST00000364566 109 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 RNU2-51P-201ENST00000410708 197 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 MTCO2P16-201ENST00000436962 677 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 RNU6-911P-201ENST00000516523 104 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 MIR6773-201ENST00000612812 74 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 MIR548O2-201ENST00000616090 70 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 RNU6-181P-201ENST00000363225 107 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 MIR509-1-201ENST00000385265 94 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 MIR509-2-201ENST00000390724 91 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 SNORD72-201ENST00000390994 80 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms