Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC113410.1-201ENST00000505029 247 ntBASIC0.75□□□□□ -2.29
CX3CL1P78423 RNU2-60P-201ENST00000517290 128 ntBASIC0.75□□□□□ -2.29
CX3CL1P78423 AC211469.2-201ENST00000605461 205 ntBASIC0.75□□□□□ -2.29
CX3CL1P78423 AC020891.4-201ENST00000605745 93 ntBASIC0.75□□□□□ -2.29
CX3CL1P78423 RMST_2.1-201ENST00000617263 136 ntBASIC0.75□□□□□ -2.29
CX3CL1P78423 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CX3CL1P78423 MIR337-201ENST00000362281 93 ntBASIC0.74□□□□□ -2.29
CX3CL1P78423 RNU6-349P-201ENST00000362402 107 ntBASIC0.74□□□□□ -2.29
CX3CL1P78423 MT-TF-201ENST00000387314 71 ntBASIC0.74□□□□□ -2.29
CX3CL1P78423 RNU2-64P-201ENST00000411315 191 ntBASIC0.74□□□□□ -2.29
CX3CL1P78423 MIR4676-201ENST00000583078 72 ntBASIC0.74□□□□□ -2.29
CX3CL1P78423 AL662814.1-201ENST00000617364 121 ntBASIC0.74□□□□□ -2.29
CX3CL1P78423 AC023934.1-201ENST00000574529 2389 ntBASIC0.74□□□□□ -2.29
CX3CL1P78423 SNORD114-27-201ENST00000363766 70 ntBASIC0.73□□□□□ -2.29
CX3CL1P78423 RNU6-1237P-201ENST00000384777 107 ntBASIC0.73□□□□□ -2.29
CX3CL1P78423 MIR520F-201ENST00000384824 87 ntBASIC0.73□□□□□ -2.29
CX3CL1P78423 PSMC1P5-201ENST00000512850 177 ntBASIC0.73□□□□□ -2.29
CX3CL1P78423 RNU6-977P-201ENST00000516411 103 ntBASIC0.73□□□□□ -2.29
CX3CL1P78423 RNU6-794P-201ENST00000517261 64 ntBASIC0.73□□□□□ -2.29
CX3CL1P78423 MIR4804-201ENST00000581683 73 ntBASIC0.73□□□□□ -2.29
CX3CL1P78423 FTX_2.1-201ENST00000618816 94 ntBASIC0.73□□□□□ -2.29
CX3CL1P78423 RNU4-11P-201ENST00000365287 132 ntBASIC0.72□□□□□ -2.29
CX3CL1P78423 MIR532-201ENST00000385025 91 ntBASIC0.72□□□□□ -2.29
CX3CL1P78423 PCNPP3-201ENST00000393579 471 ntBASIC0.72□□□□□ -2.29
CX3CL1P78423 MIR1257-201ENST00000408490 117 ntBASIC0.72□□□□□ -2.29
CX3CL1P78423 RNA5SP237-201ENST00000410414 113 ntBASIC0.72□□□□□ -2.29
CX3CL1P78423 RNA5SP144-201ENST00000410846 116 ntBASIC0.72□□□□□ -2.29
CX3CL1P78423 Y_RNA.757-201ENST00000578934 114 ntBASIC0.72□□□□□ -2.29
CX3CL1P78423 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.72□□□□□ -2.29
CX3CL1P78423 AC104465.1-201ENST00000611365 139 ntBASIC0.72□□□□□ -2.29
CX3CL1P78423 Y_RNA.171-201ENST00000363760 102 ntBASIC0.71□□□□□ -2.3
CX3CL1P78423 Y_RNA.251-201ENST00000364551 99 ntBASIC0.71□□□□□ -2.3
CX3CL1P78423 RNU6-690P-201ENST00000365242 106 ntBASIC0.71□□□□□ -2.3
CX3CL1P78423 RNU6-1130P-201ENST00000365434 107 ntBASIC0.71□□□□□ -2.3
CX3CL1P78423 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CX3CL1P78423 MIR520H-201ENST00000385126 88 ntBASIC0.71□□□□□ -2.3
CX3CL1P78423 Y_RNA.584-201ENST00000391090 114 ntBASIC0.71□□□□□ -2.3
CX3CL1P78423 MTATP6P21-201ENST00000440681 189 ntBASIC0.71□□□□□ -2.3
CX3CL1P78423 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.71□□□□□ -2.3
CX3CL1P78423 RNU6-893P-201ENST00000458841 100 ntBASIC0.71□□□□□ -2.3
CX3CL1P78423 RNU7-185P-201ENST00000459215 60 ntBASIC0.71□□□□□ -2.3
CX3CL1P78423 RNA5SP102-201ENST00000516865 106 ntBASIC0.71□□□□□ -2.3
CX3CL1P78423 RNU6-1258P-201ENST00000516911 111 ntBASIC0.71□□□□□ -2.3
CX3CL1P78423 AC112693.2-201ENST00000556538 232 ntBASIC0.71□□□□□ -2.3
CX3CL1P78423 AC011603.4-201ENST00000611325 277 ntBASIC0.71□□□□□ -2.3
CX3CL1P78423 MIR6857-201ENST00000613267 93 ntBASIC0.71□□□□□ -2.3
CX3CL1P78423 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CX3CL1P78423 Y_RNA.150-201ENST00000363562 102 ntBASIC0.7□□□□□ -2.3
CX3CL1P78423 Y_RNA.270-201ENST00000364693 104 ntBASIC0.7□□□□□ -2.3
CX3CL1P78423 SNORD116-18-201ENST00000383961 92 ntBASIC0.7□□□□□ -2.3
CX3CL1P78423 AC244098.3-201ENST00000424803 96 ntBASIC0.7□□□□□ -2.3
CX3CL1P78423 RNU6-113P-201ENST00000516653 101 ntBASIC0.7□□□□□ -2.3
CX3CL1P78423 SNORA4-201ENST00000584302 138 ntBASIC0.7□□□□□ -2.3
CX3CL1P78423 AC013244.2-201ENST00000603396 103 ntBASIC0.7□□□□□ -2.3
CX3CL1P78423 Y_RNA.778-201ENST00000620203 90 ntBASIC0.7□□□□□ -2.3
CX3CL1P78423 RNU6-151P-201ENST00000364158 107 ntBASIC0.69□□□□□ -2.3
CX3CL1P78423 RNU6-449P-201ENST00000383914 107 ntBASIC0.69□□□□□ -2.3
CX3CL1P78423 RNU6-886P-201ENST00000384319 105 ntBASIC0.69□□□□□ -2.3
CX3CL1P78423 SNORA18-201ENST00000384416 132 ntBASIC0.69□□□□□ -2.3
CX3CL1P78423 RNU6-342P-201ENST00000384521 104 ntBASIC0.69□□□□□ -2.3
CX3CL1P78423 MIR125B2-201ENST00000385128 89 ntBASIC0.69□□□□□ -2.3
CX3CL1P78423 MIR938-201ENST00000401216 83 ntBASIC0.69□□□□□ -2.3
CX3CL1P78423 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.69□□□□□ -2.3
CX3CL1P78423 RNU6-394P-201ENST00000410735 107 ntBASIC0.69□□□□□ -2.3
CX3CL1P78423 AL022718.1-201ENST00000412004 84 ntBASIC0.69□□□□□ -2.3
CX3CL1P78423 RNU6-240P-201ENST00000516098 97 ntBASIC0.69□□□□□ -2.3
CX3CL1P78423 Y_RNA.686-201ENST00000516548 134 ntBASIC0.69□□□□□ -2.3
CX3CL1P78423 AC141846.1-201ENST00000568348 142 ntBASIC0.69□□□□□ -2.3
CX3CL1P78423 AC011195.1-201ENST00000578177 177 ntBASIC0.69□□□□□ -2.3
CX3CL1P78423 MIR3671-201ENST00000580455 88 ntBASIC0.69□□□□□ -2.3
CX3CL1P78423 RNU6-508P-201ENST00000363231 103 ntBASIC0.68□□□□□ -2.3
CX3CL1P78423 Y_RNA.120-201ENST00000363304 110 ntBASIC0.68□□□□□ -2.3
CX3CL1P78423 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CX3CL1P78423 RNU6-804P-201ENST00000384286 107 ntBASIC0.68□□□□□ -2.3
CX3CL1P78423 Y_RNA.580-201ENST00000391004 95 ntBASIC0.68□□□□□ -2.3
CX3CL1P78423 RNU1-119P-201ENST00000391122 165 ntBASIC0.68□□□□□ -2.3
CX3CL1P78423 AC108059.2-201ENST00000434626 151 ntBASIC0.68□□□□□ -2.3
CX3CL1P78423 RNU7-56P-201ENST00000458744 62 ntBASIC0.68□□□□□ -2.3
CX3CL1P78423 Y_RNA.651-201ENST00000459380 103 ntBASIC0.68□□□□□ -2.3
CX3CL1P78423 AC098479.1-201ENST00000609225 154 ntBASIC0.68□□□□□ -2.3
CX3CL1P78423 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.68□□□□□ -2.3
CX3CL1P78423 MIR96-201ENST00000362288 78 ntBASIC0.67□□□□□ -2.3
CX3CL1P78423 SNORD114-2-201ENST00000363953 78 ntBASIC0.67□□□□□ -2.3
CX3CL1P78423 SNORD18B-201ENST00000365659 72 ntBASIC0.67□□□□□ -2.3
CX3CL1P78423 Y_RNA.470-201ENST00000384307 117 ntBASIC0.67□□□□□ -2.3
CX3CL1P78423 MIR573-201ENST00000384964 99 ntBASIC0.67□□□□□ -2.3
CX3CL1P78423 MIR146A-201ENST00000385201 99 ntBASIC0.67□□□□□ -2.3
CX3CL1P78423 RPL39P25-201ENST00000449384 154 ntBASIC0.67□□□□□ -2.3
CX3CL1P78423 RNU7-197P-201ENST00000458836 62 ntBASIC0.67□□□□□ -2.3
CX3CL1P78423 RNU7-113P-201ENST00000459273 62 ntBASIC0.67□□□□□ -2.3
CX3CL1P78423 Y_RNA.690-201ENST00000516603 95 ntBASIC0.67□□□□□ -2.3
CX3CL1P78423 MIR4698-201ENST00000577795 80 ntBASIC0.67□□□□□ -2.3
CX3CL1P78423 MIR3973-201ENST00000579824 107 ntBASIC0.67□□□□□ -2.3
CX3CL1P78423 MIR4305-201ENST00000583252 102 ntBASIC0.67□□□□□ -2.3
CX3CL1P78423 FAM71BP1-201ENST00000604431 523 ntBASIC0.67□□□□□ -2.3
CX3CL1P78423 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
CX3CL1P78423 Y_RNA.8-201ENST00000362353 102 ntBASIC0.66□□□□□ -2.3
CX3CL1P78423 RNU6-364P-201ENST00000384387 107 ntBASIC0.66□□□□□ -2.3
CX3CL1P78423 AL603914.1-201ENST00000401964 204 ntBASIC0.66□□□□□ -2.3
CX3CL1P78423 RNU2-35P-201ENST00000516446 142 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 223.5 ms