Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RNU6-126P-201ENST00000516685 103 ntBASIC-0.08□□□□□ -2.42
VSX2P58304 SNORA40.15-201ENST00000516884 107 ntBASIC-0.08□□□□□ -2.42
VSX2P58304 MIR548S-201ENST00000581352 82 ntBASIC-0.08□□□□□ -2.42
VSX2P58304 MIR4305-201ENST00000583252 102 ntBASIC-0.08□□□□□ -2.42
VSX2P58304 AC097639.2-201ENST00000603159 172 ntBASIC-0.08□□□□□ -2.42
VSX2P58304 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.08□□□□□ -2.42
VSX2P58304 MIR499B-201ENST00000636498 73 ntBASIC-0.08□□□□□ -2.42
VSX2P58304 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.09□□□□□ -2.42
VSX2P58304 SNORA72.6-201ENST00000384520 129 ntBASIC-0.09□□□□□ -2.42
VSX2P58304 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.09□□□□□ -2.42
VSX2P58304 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.09□□□□□ -2.42
VSX2P58304 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.1□□□□□ -2.43
VSX2P58304 SNORA2A-201ENST00000383885 135 ntBASIC-0.1□□□□□ -2.43
VSX2P58304 RNU6-535P-201ENST00000384722 107 ntBASIC-0.1□□□□□ -2.43
VSX2P58304 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
VSX2P58304 MIR548H2-201ENST00000408874 88 ntBASIC-0.1□□□□□ -2.43
VSX2P58304 SERF1AP1-201ENST00000514575 187 ntBASIC-0.1□□□□□ -2.43
VSX2P58304 RNU1-29P-201ENST00000606574 126 ntBASIC-0.1□□□□□ -2.43
VSX2P58304 AC037487.3-201ENST00000606668 112 ntBASIC-0.1□□□□□ -2.43
VSX2P58304 AL442067.1-201ENST00000613261 223 ntBASIC-0.1□□□□□ -2.43
VSX2P58304 AC244669.1-204ENST00000621564 178 ntBASIC-0.1□□□□□ -2.43
VSX2P58304 MIR6841-201ENST00000637129 72 ntBASIC-0.1□□□□□ -2.43
VSX2P58304 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 RNY1P13-201ENST00000365030 105 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 RNU6-949P-201ENST00000384040 107 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 MIR593-201ENST00000384856 100 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 MIR760-201ENST00000390220 80 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.11□□□□□ -2.43
VSX2P58304 MTND4LP30-201ENST00000454092 297 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 RNU6-765P-201ENST00000516916 99 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 MIR5197-201ENST00000583721 112 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 MIR6759-201ENST00000638110 65 ntBASIC-0.11□□□□□ -2.43
VSX2P58304 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.12□□□□□ -2.43
VSX2P58304 SNORA22B-201ENST00000383876 138 ntBASIC-0.12□□□□□ -2.43
VSX2P58304 SNORA18-201ENST00000384416 132 ntBASIC-0.12□□□□□ -2.43
VSX2P58304 MIR145-201ENST00000384967 88 ntBASIC-0.12□□□□□ -2.43
VSX2P58304 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.12□□□□□ -2.43
VSX2P58304 RNA5SP261-201ENST00000410536 106 ntBASIC-0.12□□□□□ -2.43
VSX2P58304 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.12□□□□□ -2.43
VSX2P58304 RNU7-80P-201ENST00000459562 61 ntBASIC-0.12□□□□□ -2.43
VSX2P58304 RNU7-129P-201ENST00000516128 62 ntBASIC-0.12□□□□□ -2.43
VSX2P58304 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.12□□□□□ -2.43
VSX2P58304 MIR3152-201ENST00000579801 74 ntBASIC-0.12□□□□□ -2.43
VSX2P58304 AC091304.10-201ENST00000641554 121 ntBASIC-0.12□□□□□ -2.43
VSX2P58304 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.12□□□□□ -2.43
VSX2P58304 SNORA22.1-201ENST00000362701 134 ntBASIC-0.13□□□□□ -2.43
VSX2P58304 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.13□□□□□ -2.43
VSX2P58304 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.13□□□□□ -2.43
VSX2P58304 RNU6-302P-201ENST00000365249 107 ntBASIC-0.13□□□□□ -2.43
VSX2P58304 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.13□□□□□ -2.43
VSX2P58304 RNY3P5-201ENST00000384127 102 ntBASIC-0.13□□□□□ -2.43
VSX2P58304 RPL39P34-201ENST00000477141 156 ntBASIC-0.13□□□□□ -2.43
VSX2P58304 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.13□□□□□ -2.43
VSX2P58304 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.13□□□□□ -2.43
VSX2P58304 AC113195.1-201ENST00000579952 141 ntBASIC-0.13□□□□□ -2.43
VSX2P58304 AC021613.1-201ENST00000623880 111 ntBASIC-0.13□□□□□ -2.43
VSX2P58304 MTND5P32-201ENST00000560711 1802 ntBASIC-0.13□□□□□ -2.43
VSX2P58304 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.14□□□□□ -2.43
VSX2P58304 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.14□□□□□ -2.43
VSX2P58304 MIR616-201ENST00000385293 97 ntBASIC-0.14□□□□□ -2.43
VSX2P58304 MIR4639-201ENST00000584938 69 ntBASIC-0.14□□□□□ -2.43
VSX2P58304 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
VSX2P58304 SNORA63.5-201ENST00000363548 123 ntBASIC-0.15□□□□□ -2.43
VSX2P58304 SNORA32.1-201ENST00000364514 115 ntBASIC-0.15□□□□□ -2.43
VSX2P58304 RNA5SP128-201ENST00000365305 116 ntBASIC-0.15□□□□□ -2.43
VSX2P58304 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.15□□□□□ -2.43
VSX2P58304 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.15□□□□□ -2.43
VSX2P58304 AC082651.2-201ENST00000496833 166 ntBASIC-0.15□□□□□ -2.43
VSX2P58304 RNU6-531P-201ENST00000516694 104 ntBASIC-0.15□□□□□ -2.43
VSX2P58304 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.15□□□□□ -2.43
VSX2P58304 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.16□□□□□ -2.44
VSX2P58304 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.16□□□□□ -2.44
VSX2P58304 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.16□□□□□ -2.44
VSX2P58304 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.16□□□□□ -2.44
VSX2P58304 RNU6V-201ENST00000384105 107 ntBASIC-0.16□□□□□ -2.44
VSX2P58304 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.16□□□□□ -2.44
VSX2P58304 MIR610-201ENST00000385139 96 ntBASIC-0.16□□□□□ -2.44
VSX2P58304 AC108059.2-201ENST00000434626 151 ntBASIC-0.16□□□□□ -2.44
VSX2P58304 RNU6-570P-201ENST00000517051 105 ntBASIC-0.16□□□□□ -2.44
VSX2P58304 RNU6-988P-201ENST00000519081 107 ntBASIC-0.16□□□□□ -2.44
VSX2P58304 AC141557.1-201ENST00000540982 400 ntBASIC-0.16□□□□□ -2.44
VSX2P58304 AL442663.2-201ENST00000554385 511 ntBASIC-0.16□□□□□ -2.44
VSX2P58304 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.16□□□□□ -2.44
VSX2P58304 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.17□□□□□ -2.44
VSX2P58304 RNU4-16P-201ENST00000364737 141 ntBASIC-0.17□□□□□ -2.44
VSX2P58304 RNU6-756P-201ENST00000383997 107 ntBASIC-0.17□□□□□ -2.44
VSX2P58304 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.17□□□□□ -2.44
VSX2P58304 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.17□□□□□ -2.44
VSX2P58304 MT-TD-201ENST00000387419 68 ntBASIC-0.17□□□□□ -2.44
VSX2P58304 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
VSX2P58304 SNORD2.1-201ENST00000458762 69 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms